Literature DB >> 21842081

Experimental thermodynamics of free glycine conformations: the first Raman experiment after twenty years of calculations.

Roman M Balabin1.   

Abstract

Low-frequency, gas-phase vibrational (Raman) spectroscopy was used in conjunction with a jet-cooled technique and ab initio calculations to study the intrinsic thermodynamic properties of the free (gas-phase) amino acid--glycine (Gly, H(2)NCHRCOOH). The first experimental evaluation of the enthalpy differences between the Gly conformations in the vapor phase is presented. The enthalpy values were determined to be 0.33 ± 0.05 and 1.15 ± 0.07 kcal mol(-1) for the ccc and gtt rotamers, respectively; the corresponding relative entropy values were -2.86 ± 0.12 and -0.12 ± 0.16 cal mol(-1) K(-1), respectively. It was proven that the low-frequency Raman and infrared spectroscopy is capable of estimating intrinsic thermodynamic parameters of protein building blocks, such as intermolecular hydrogen bonds (ccc conformer) and rotation around one of the bonds (N-C, gtt conformer). The inaccuracy of the RRHO approximation to Gly conformers was experimentally confirmed. Benchmark data for quantum theory and molecular dynamics were provided.

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Year:  2011        PMID: 21842081     DOI: 10.1039/c1cp20805e

Source DB:  PubMed          Journal:  Phys Chem Chem Phys        ISSN: 1463-9076            Impact factor:   3.676


  2 in total

1.  Fully anharmonic IR and Raman spectra of medium-size molecular systems: accuracy and interpretation.

Authors:  Vincenzo Barone; Malgorzata Biczysko; Julien Bloino
Journal:  Phys Chem Chem Phys       Date:  2014-02-07       Impact factor: 3.676

2.  Accurate structure, thermodynamic and spectroscopic parameters from CC and CC/DFT schemes: the challenge of the conformational equilibrium in glycine.

Authors:  Vincenzo Barone; Malgorzata Biczysko; Julien Bloino; Cristina Puzzarini
Journal:  Phys Chem Chem Phys       Date:  2013-04-19       Impact factor: 3.676

  2 in total

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