Literature DB >> 21837219

Diethyl 2-{4-diethyl-amino-2-[(dimethyl-carbamothio-yl)-oxy]benzyl-idene}malonate.

Dan Sun, Xiao-Xing Fan, Shi-Yao Yang, Hong Zheng.   

Abstract

In the title compound, C(21)H(30)N(2)O(5)S, the plane of the dimeth-yl-thio-carbamic group makes a dihedral angle of 78.41 (7)° with the central benzene ring. One of the carbonyl groups in the α,β-unsaturated malonate side chain makes a dihedral angle of 8.73 (10)° with the central benzene ring, while the other carbonyl group makes a dihedral angle of 81.52 (8)°.

Entities:  

Year:  2011        PMID: 21837219      PMCID: PMC3151902          DOI: 10.1107/S1600536811024305

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related structures, see: Jiang & Wang (2009 ▶); Kim & Swager (2003 ▶). For hypochlorous acid probes, see: Sun et al. (2008 ▶).

Experimental

Crystal data

C21H30N2O5S M = 422.53 Monoclinic, a = 14.2704 (6) Å b = 9.2716 (4) Å c = 25.9206 (8) Å β = 139.588 (1)° V = 2223.30 (15) Å3 Z = 4 Mo Kα radiation μ = 0.18 mm−1 T = 173 K 0.40 × 0.37 × 0.07 mm

Data collection

Bruker APEX area-detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2002 ▶) T min = 0.932, T max = 0.988 25540 measured reflections 5414 independent reflections 4778 reflections with I > 2σ(I) R int = 0.037

Refinement

R[F 2 > 2σ(F 2)] = 0.068 wR(F 2) = 0.155 S = 1.18 5414 reflections 268 parameters H-atom parameters constrained Δρmax = 0.39 e Å−3 Δρmin = −0.29 e Å−3 Data collection: SMART (Bruker, 2002 ▶); cell refinement: SAINT (Bruker, 2002 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: DIAMOND (Brandenburg, 2011 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536811024305/kj2176sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811024305/kj2176Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536811024305/kj2176Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C21H30N2O5SF(000) = 904
Mr = 422.53Dx = 1.262 Mg m3Dm = 1.262 Mg m3Dm measured by not measured
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 6772 reflections
a = 14.2704 (6) Åθ = 2.4–28.0°
b = 9.2716 (4) ŵ = 0.18 mm1
c = 25.9206 (8) ÅT = 173 K
β = 139.588 (1)°Plate, yellow
V = 2223.30 (15) Å30.40 × 0.37 × 0.07 mm
Z = 4
Bruker APEX area-detector diffractometer5414 independent reflections
Radiation source: fine-focus sealed tube4778 reflections with I > 2σ(I)
graphiteRint = 0.037
φ and ω scansθmax = 28.8°, θmin = 1.6°
Absorption correction: multi-scan (SADABS; Bruker, 2002)h = −19→19
Tmin = 0.932, Tmax = 0.988k = −12→11
25540 measured reflectionsl = −34→33
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.068Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.155H-atom parameters constrained
S = 1.18w = 1/[σ2(Fo2) + (0.0604P)2 + 1.2811P] where P = (Fo2 + 2Fc2)/3
5414 reflections(Δ/σ)max < 0.001
268 parametersΔρmax = 0.39 e Å3
0 restraintsΔρmin = −0.29 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
S10.26921 (7)0.44597 (7)0.62902 (4)0.03779 (17)
O10.46394 (15)0.63622 (16)0.74213 (8)0.0260 (3)
O20.67228 (17)0.44354 (18)1.03491 (9)0.0376 (4)
O30.51195 (16)0.28130 (16)0.94122 (9)0.0295 (3)
O40.82337 (16)0.34284 (18)0.94609 (9)0.0350 (4)
O50.83126 (16)0.24105 (17)1.02732 (9)0.0320 (4)
N10.4991 (2)0.5538 (2)0.67853 (11)0.0308 (4)
N20.07452 (18)0.8351 (2)0.67478 (10)0.0281 (4)
C10.3890 (2)0.6452 (2)0.75718 (11)0.0229 (4)
C20.2706 (2)0.7321 (2)0.70888 (11)0.0248 (4)
H2A0.23890.77920.66510.030*
C30.1956 (2)0.7521 (2)0.72368 (11)0.0241 (4)
C40.2515 (2)0.6825 (2)0.79130 (11)0.0248 (4)
H4A0.20570.69630.80450.030*
C50.3701 (2)0.5958 (2)0.83781 (11)0.0244 (4)
H5A0.40330.54920.88220.029*
C60.4447 (2)0.5725 (2)0.82317 (11)0.0235 (4)
C70.4143 (2)0.5470 (2)0.68376 (12)0.0259 (4)
C80.4655 (3)0.4683 (3)0.61905 (15)0.0391 (6)
H8A0.43170.37270.61550.047*
H8B0.55240.45810.63420.047*
H8C0.38970.51650.56730.047*
C90.6294 (2)0.6407 (3)0.73122 (14)0.0372 (5)
H9A0.63520.70070.76470.045*
H9B0.62680.70270.69950.045*
H9C0.71410.57740.76500.045*
C100.0145 (2)0.9012 (2)0.60339 (12)0.0304 (5)
H10A0.09470.93530.61490.037*
H10B−0.04350.98640.58920.037*
C11−0.0791 (3)0.8002 (3)0.53356 (13)0.0416 (6)
H11A−0.11530.85000.48760.050*
H11B−0.16090.76880.52050.050*
H11C−0.02220.71600.54700.050*
C12−0.0149 (2)0.8433 (3)0.68272 (14)0.0352 (5)
H12A−0.00610.75180.70580.042*
H12B−0.11710.85360.62910.042*
C130.0234 (4)0.9656 (3)0.7337 (2)0.0611 (8)
H13A−0.04640.97050.73280.073*
H13B0.02111.05620.71320.073*
H13C0.12060.95050.78840.073*
C140.5714 (2)0.4841 (2)0.86988 (11)0.0250 (4)
H14A0.60990.48500.85210.030*
C150.6448 (2)0.4009 (2)0.93361 (11)0.0248 (4)
C160.6132 (2)0.3805 (2)0.97606 (11)0.0259 (4)
C170.4749 (3)0.2533 (3)0.97892 (15)0.0389 (5)
H17A0.44300.34340.98260.047*
H17B0.55980.21531.03330.047*
C180.3562 (3)0.1456 (3)0.92939 (18)0.0491 (7)
H18A0.32390.12920.95140.059*
H18B0.39120.05470.92930.059*
H18C0.27530.18170.87480.059*
C190.7746 (2)0.3272 (2)0.96794 (12)0.0267 (4)
C200.9633 (3)0.1675 (3)1.06771 (14)0.0382 (5)
H20A1.03440.23751.08390.046*
H20B0.94280.09491.03210.046*
C211.0204 (3)0.0966 (4)1.13851 (18)0.0591 (8)
H21A1.11020.04571.16760.071*
H21B0.94910.02761.12170.071*
H21C1.04000.16961.17310.071*
U11U22U33U12U13U23
S10.0414 (3)0.0372 (3)0.0373 (3)−0.0122 (3)0.0306 (3)−0.0120 (2)
O10.0245 (7)0.0321 (8)0.0240 (7)−0.0033 (6)0.0192 (6)−0.0039 (6)
O20.0341 (8)0.0457 (10)0.0272 (8)−0.0033 (7)0.0217 (7)−0.0105 (7)
O30.0340 (8)0.0281 (8)0.0303 (7)−0.0015 (6)0.0255 (7)−0.0032 (6)
O40.0330 (8)0.0432 (9)0.0327 (8)0.0092 (7)0.0260 (7)0.0039 (7)
O50.0297 (8)0.0341 (8)0.0314 (8)0.0121 (6)0.0230 (7)0.0094 (6)
N10.0369 (10)0.0302 (9)0.0342 (9)0.0037 (8)0.0295 (9)0.0027 (8)
N20.0257 (8)0.0313 (9)0.0232 (8)0.0074 (7)0.0174 (7)0.0059 (7)
C10.0228 (9)0.0241 (9)0.0217 (9)−0.0036 (8)0.0169 (8)−0.0045 (8)
C20.0250 (9)0.0272 (10)0.0197 (9)−0.0002 (8)0.0163 (8)0.0015 (8)
C30.0224 (9)0.0219 (9)0.0223 (9)−0.0002 (7)0.0155 (8)−0.0015 (7)
C40.0247 (9)0.0279 (10)0.0244 (9)0.0005 (8)0.0194 (9)−0.0002 (8)
C50.0255 (9)0.0243 (10)0.0197 (9)0.0003 (8)0.0161 (8)0.0008 (8)
C60.0214 (9)0.0225 (10)0.0211 (9)−0.0009 (7)0.0147 (8)−0.0026 (7)
C70.0296 (10)0.0242 (10)0.0233 (9)0.0044 (8)0.0201 (9)0.0036 (8)
C80.0589 (16)0.0341 (12)0.0474 (14)0.0074 (11)0.0469 (14)0.0023 (10)
C90.0343 (12)0.0456 (14)0.0399 (12)0.0043 (10)0.0305 (11)0.0056 (11)
C100.0292 (10)0.0287 (10)0.0258 (10)0.0060 (9)0.0189 (9)0.0054 (8)
C110.0343 (12)0.0497 (15)0.0268 (11)0.0004 (11)0.0193 (10)−0.0016 (10)
C120.0271 (10)0.0404 (13)0.0355 (11)0.0094 (10)0.0231 (10)0.0106 (10)
C130.084 (2)0.0569 (18)0.075 (2)0.0151 (17)0.069 (2)0.0026 (16)
C140.0229 (9)0.0252 (10)0.0229 (9)−0.0020 (8)0.0164 (9)−0.0042 (8)
C150.0219 (9)0.0240 (10)0.0207 (9)−0.0010 (8)0.0141 (8)−0.0050 (8)
C160.0220 (9)0.0239 (10)0.0205 (9)0.0069 (8)0.0130 (8)0.0021 (8)
C170.0528 (15)0.0358 (12)0.0456 (13)0.0028 (11)0.0423 (13)0.0016 (10)
C180.0492 (15)0.0507 (16)0.0628 (17)−0.0013 (13)0.0469 (15)0.0011 (14)
C190.0253 (10)0.0251 (10)0.0232 (9)−0.0005 (8)0.0167 (9)−0.0052 (8)
C200.0327 (12)0.0415 (13)0.0354 (12)0.0169 (10)0.0246 (11)0.0096 (10)
C210.0573 (18)0.071 (2)0.0534 (17)0.0381 (16)0.0433 (16)0.0348 (15)
S1—C71.645 (2)C9—H9C0.9800
O1—C71.358 (2)C10—C111.502 (3)
O1—C11.393 (2)C10—H10A0.9900
O2—C161.192 (2)C10—H10B0.9900
O3—C161.327 (3)C11—H11A0.9800
O3—C171.445 (3)C11—H11B0.9800
O4—C191.194 (3)C11—H11C0.9800
O5—C191.329 (3)C12—C131.493 (4)
O5—C201.451 (3)C12—H12A0.9900
N1—C71.317 (3)C12—H12B0.9900
N1—C91.450 (3)C13—H13A0.9800
N1—C81.452 (3)C13—H13B0.9800
N2—C31.360 (3)C13—H13C0.9800
N2—C121.441 (3)C14—C151.336 (3)
N2—C101.456 (3)C14—H14A0.9500
C1—C21.360 (3)C15—C191.476 (3)
C1—C61.394 (3)C15—C161.485 (3)
C2—C31.397 (3)C17—C181.484 (4)
C2—H2A0.9500C17—H17A0.9900
C3—C41.413 (3)C17—H17B0.9900
C4—C51.363 (3)C18—H18A0.9800
C4—H4A0.9500C18—H18B0.9800
C5—C61.394 (3)C18—H18C0.9800
C5—H5A0.9500C20—C211.478 (3)
C6—C141.439 (3)C20—H20A0.9900
C8—H8A0.9800C20—H20B0.9900
C8—H8B0.9800C21—H21A0.9800
C8—H8C0.9800C21—H21B0.9800
C9—H9A0.9800C21—H21C0.9800
C9—H9B0.9800
C7—O1—C1119.27 (16)C10—C11—H11C109.5
C16—O3—C17115.70 (17)H11A—C11—H11C109.5
C19—O5—C20115.40 (17)H11B—C11—H11C109.5
C7—N1—C9123.26 (19)N2—C12—C13113.5 (2)
C7—N1—C8119.8 (2)N2—C12—H12A108.9
C9—N1—C8116.97 (19)C13—C12—H12A108.9
C3—N2—C12122.11 (17)N2—C12—H12B108.9
C3—N2—C10121.58 (17)C13—C12—H12B108.9
C12—N2—C10115.53 (17)H12A—C12—H12B107.7
C2—C1—O1117.30 (17)C12—C13—H13A109.5
C2—C1—C6124.39 (18)C12—C13—H13B109.5
O1—C1—C6118.19 (17)H13A—C13—H13B109.5
C1—C2—C3120.01 (18)C12—C13—H13C109.5
C1—C2—H2A120.0H13A—C13—H13C109.5
C3—C2—H2A120.0H13B—C13—H13C109.5
N2—C3—C2120.95 (18)C15—C14—C6132.0 (2)
N2—C3—C4122.08 (18)C15—C14—H14A114.0
C2—C3—C4116.97 (18)C6—C14—H14A114.0
C5—C4—C3120.95 (18)C14—C15—C19117.09 (19)
C5—C4—H4A119.5C14—C15—C16126.51 (19)
C3—C4—H4A119.5C19—C15—C16116.33 (17)
C4—C5—C6122.88 (18)O2—C16—O3123.6 (2)
C4—C5—H5A118.6O2—C16—C15124.6 (2)
C6—C5—H5A118.6O3—C16—C15111.83 (17)
C1—C6—C5114.76 (17)O3—C17—C18107.4 (2)
C1—C6—C14119.08 (18)O3—C17—H17A110.2
C5—C6—C14126.15 (18)C18—C17—H17A110.2
N1—C7—O1110.20 (18)O3—C17—H17B110.2
N1—C7—S1126.16 (16)C18—C17—H17B110.2
O1—C7—S1123.64 (15)H17A—C17—H17B108.5
N1—C8—H8A109.5C17—C18—H18A109.5
N1—C8—H8B109.5C17—C18—H18B109.5
H8A—C8—H8B109.5H18A—C18—H18B109.5
N1—C8—H8C109.5C17—C18—H18C109.5
H8A—C8—H8C109.5H18A—C18—H18C109.5
H8B—C8—H8C109.5H18B—C18—H18C109.5
N1—C9—H9A109.5O4—C19—O5124.18 (19)
N1—C9—H9B109.5O4—C19—C15125.08 (19)
H9A—C9—H9B109.5O5—C19—C15110.74 (18)
N1—C9—H9C109.5O5—C20—C21106.9 (2)
H9A—C9—H9C109.5O5—C20—H20A110.3
H9B—C9—H9C109.5C21—C20—H20A110.3
N2—C10—C11113.09 (19)O5—C20—H20B110.3
N2—C10—H10A109.0C21—C20—H20B110.3
C11—C10—H10A109.0H20A—C20—H20B108.6
N2—C10—H10B109.0C20—C21—H21A109.5
C11—C10—H10B109.0C20—C21—H21B109.5
H10A—C10—H10B107.8H21A—C21—H21B109.5
C10—C11—H11A109.5C20—C21—H21C109.5
C10—C11—H11B109.5H21A—C21—H21C109.5
H11A—C11—H11B109.5H21B—C21—H21C109.5
C7—O1—C1—C2−81.3 (2)C1—O1—C7—S1−0.5 (3)
C7—O1—C1—C6102.6 (2)C3—N2—C10—C1182.5 (3)
O1—C1—C2—C3−176.38 (17)C12—N2—C10—C11−87.6 (2)
C6—C1—C2—C3−0.6 (3)C3—N2—C12—C1393.3 (3)
C12—N2—C3—C2172.1 (2)C10—N2—C12—C13−96.7 (2)
C10—N2—C3—C22.7 (3)C1—C6—C14—C15−178.1 (2)
C12—N2—C3—C4−7.9 (3)C5—C6—C14—C152.9 (4)
C10—N2—C3—C4−177.31 (19)C6—C14—C15—C19−178.4 (2)
C1—C2—C3—N2−178.06 (19)C6—C14—C15—C16−1.6 (4)
C1—C2—C3—C42.0 (3)C17—O3—C16—O20.4 (3)
N2—C3—C4—C5177.70 (19)C17—O3—C16—C15179.54 (17)
C2—C3—C4—C5−2.3 (3)C14—C15—C16—O2−97.5 (3)
C3—C4—C5—C61.3 (3)C19—C15—C16—O279.4 (3)
C2—C1—C6—C5−0.6 (3)C14—C15—C16—O383.4 (3)
O1—C1—C6—C5175.20 (17)C19—C15—C16—O3−99.7 (2)
C2—C1—C6—C14−179.70 (19)C16—O3—C17—C18177.37 (19)
O1—C1—C6—C14−3.9 (3)C20—O5—C19—O42.0 (3)
C4—C5—C6—C10.2 (3)C20—O5—C19—C15−177.53 (17)
C4—C5—C6—C14179.26 (19)C14—C15—C19—O44.6 (3)
C9—N1—C7—O12.5 (3)C16—C15—C19—O4−172.5 (2)
C8—N1—C7—O1−179.18 (18)C14—C15—C19—O5−175.81 (18)
C9—N1—C7—S1−177.15 (17)C16—C15—C19—O57.0 (2)
C8—N1—C7—S11.1 (3)C19—O5—C20—C21171.3 (2)
C1—O1—C7—N1179.82 (16)
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