Literature DB >> 21837193

(E)-6-Bromo-3-{2-[2-(2-meth-oxy-benzyl-idene)hydrazin-yl]-1,3-thia-zol-4-yl}-2H-chromen-2-one.

Afsheen Arshad, Hasnah Osman, Chan Kit Lam, Madhukar Hemamalini, Hoong-Kun Fun.   

Abstract

In the title compound, C(20)H(14)BrN(3)O(3)S, the mol-ecule adopts an E configuration about the central C=N double bond. The chromene ring system and the thia-zole ring are approximately planar [maximum deviations = 0.029 (3) and 0.007 (3) Å, respectively]. The chromene ring system is inclined at angles of 7.37 (12) and 13.90 (13)° with respect to the thia-zole and benzene rings, respectively, while the thia-zole ring makes a dihedral angle of 12.58 (15)° with the benzene ring. In the crystal, mol-ecules are connected by N-H⋯O hydrogen bonds, forming C(8) supra-molecular chains along the c axis.

Entities:  

Year:  2011        PMID: 21837193      PMCID: PMC3152023          DOI: 10.1107/S1600536811024536

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related structures, further synthetic details and background references, see: Arshad et al. (2011 ▶).

Experimental

Crystal data

C20H14BrN3O3S M = 456.31 Monoclinic, a = 7.2802 (12) Å b = 19.551 (3) Å c = 14.0638 (18) Å β = 113.352 (7)° V = 1837.8 (5) Å3 Z = 4 Mo Kα radiation μ = 2.38 mm−1 T = 296 K 0.43 × 0.07 × 0.04 mm

Data collection

Bruker APEXII DUO CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2009 ▶) T min = 0.427, T max = 0.921 11951 measured reflections 4266 independent reflections 2786 reflections with I > 2σ(I) R int = 0.036

Refinement

R[F 2 > 2σ(F 2)] = 0.038 wR(F 2) = 0.089 S = 1.01 4266 reflections 253 parameters H-atom parameters constrained Δρmax = 0.30 e Å−3 Δρmin = −0.29 e Å−3 Data collection: APEX2 (Bruker, 2009 ▶); cell refinement: SAINT (Bruker, 2009 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL and PLATON (Spek, 2009 ▶). Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536811024536/hb5923sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811024536/hb5923Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536811024536/hb5923Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C20H14BrN3O3SF(000) = 920
Mr = 456.31Dx = 1.649 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 2197 reflections
a = 7.2802 (12) Åθ = 3.0–22.4°
b = 19.551 (3) ŵ = 2.38 mm1
c = 14.0638 (18) ÅT = 296 K
β = 113.352 (7)°Needle, yellow
V = 1837.8 (5) Å30.43 × 0.07 × 0.04 mm
Z = 4
Bruker APEXII DUO CCD diffractometer4266 independent reflections
Radiation source: fine-focus sealed tube2786 reflections with I > 2σ(I)
graphiteRint = 0.036
φ and ω scansθmax = 27.7°, θmin = 2.6°
Absorption correction: multi-scan (SADABS; Bruker, 2009)h = −9→9
Tmin = 0.427, Tmax = 0.921k = −25→24
11951 measured reflectionsl = −18→18
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.038Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.089H-atom parameters constrained
S = 1.01w = 1/[σ2(Fo2) + (0.034P)2 + 0.488P] where P = (Fo2 + 2Fc2)/3
4266 reflections(Δ/σ)max = 0.001
253 parametersΔρmax = 0.30 e Å3
0 restraintsΔρmin = −0.29 e Å3
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Br10.24394 (5)1.084300 (17)0.06129 (3)0.06481 (13)
S10.21746 (11)0.61887 (3)0.38892 (5)0.04655 (18)
O10.2719 (3)0.92795 (9)0.43367 (12)0.0453 (4)
O20.2679 (3)0.83501 (10)0.51902 (14)0.0567 (5)
O30.2197 (3)0.37198 (9)0.04438 (13)0.0518 (5)
N10.2186 (3)0.71059 (10)0.25691 (15)0.0403 (5)
N20.2131 (3)0.59752 (10)0.19923 (16)0.0459 (6)
H10.22640.61020.13750.055*
N30.2291 (3)0.53132 (10)0.23123 (16)0.0397 (5)
C10.2567 (4)0.85797 (13)0.43706 (19)0.0402 (6)
C20.2663 (4)0.96192 (13)0.34700 (19)0.0407 (6)
C30.2939 (4)1.03179 (15)0.3551 (2)0.0515 (7)
H3A0.31601.05410.41710.062*
C40.2880 (4)1.06785 (14)0.2703 (2)0.0523 (7)
H4A0.30681.11500.27440.063*
C50.2538 (4)1.03353 (14)0.1781 (2)0.0446 (6)
C60.2293 (4)0.96446 (14)0.1706 (2)0.0439 (6)
H6A0.20810.94240.10850.053*
C70.2358 (4)0.92670 (12)0.25618 (18)0.0372 (6)
C80.2190 (4)0.85417 (13)0.25783 (19)0.0401 (6)
H8A0.19910.82970.19780.048*
C90.2310 (4)0.81934 (13)0.34368 (18)0.0372 (6)
C100.2232 (4)0.74489 (13)0.34487 (18)0.0366 (6)
C110.2234 (4)0.70361 (13)0.42228 (19)0.0430 (6)
H11A0.22640.71920.48540.052*
C120.2177 (4)0.64534 (12)0.27085 (18)0.0363 (6)
C130.2343 (4)0.48370 (12)0.17014 (19)0.0375 (6)
H13A0.22090.49340.10300.045*
C140.2620 (4)0.41341 (12)0.20920 (18)0.0348 (5)
C150.3017 (4)0.40043 (13)0.3125 (2)0.0445 (6)
H15A0.30430.43670.35590.053*
C160.3374 (5)0.33511 (14)0.3522 (2)0.0544 (8)
H16A0.36180.32750.42150.065*
C170.3368 (5)0.28129 (14)0.2896 (2)0.0557 (8)
H17A0.36500.23740.31700.067*
C180.2947 (4)0.29182 (13)0.1862 (2)0.0479 (7)
H18A0.29170.25500.14370.057*
C190.2572 (4)0.35707 (13)0.14584 (18)0.0376 (6)
C200.2017 (5)0.31519 (14)−0.0228 (2)0.0530 (7)
H20A0.16870.3315−0.09200.080*
H20B0.09790.2852−0.02200.080*
H20C0.32620.29080.00050.080*
U11U22U33U12U13U23
Br10.0782 (2)0.0614 (2)0.0665 (2)−0.00399 (17)0.04110 (19)0.01182 (16)
S10.0669 (5)0.0376 (4)0.0421 (4)−0.0001 (3)0.0291 (3)0.0017 (3)
O10.0660 (12)0.0354 (10)0.0349 (10)0.0021 (9)0.0203 (9)−0.0065 (8)
O20.0930 (16)0.0460 (11)0.0367 (11)0.0041 (10)0.0315 (11)−0.0039 (9)
O30.0867 (14)0.0353 (10)0.0391 (10)−0.0008 (10)0.0310 (10)−0.0042 (8)
N10.0546 (13)0.0317 (12)0.0366 (12)−0.0013 (10)0.0202 (10)−0.0057 (9)
N20.0760 (16)0.0297 (12)0.0394 (12)−0.0014 (11)0.0307 (12)−0.0028 (9)
N30.0529 (13)0.0285 (11)0.0404 (12)−0.0002 (10)0.0213 (10)−0.0002 (9)
C10.0459 (15)0.0371 (15)0.0377 (14)0.0032 (12)0.0167 (12)−0.0057 (12)
C20.0451 (15)0.0357 (15)0.0408 (15)0.0018 (12)0.0166 (12)−0.0033 (12)
C30.0630 (19)0.0439 (17)0.0441 (16)−0.0017 (14)0.0176 (14)−0.0127 (13)
C40.0640 (19)0.0327 (15)0.0591 (18)−0.0057 (14)0.0234 (16)−0.0050 (13)
C50.0454 (16)0.0408 (16)0.0516 (16)0.0001 (13)0.0235 (13)0.0055 (13)
C60.0511 (16)0.0444 (16)0.0398 (15)−0.0008 (13)0.0219 (13)−0.0045 (12)
C70.0410 (14)0.0340 (14)0.0366 (14)0.0012 (11)0.0155 (12)−0.0064 (11)
C80.0481 (16)0.0386 (15)0.0349 (14)−0.0009 (12)0.0179 (12)−0.0093 (11)
C90.0400 (14)0.0367 (14)0.0359 (14)0.0016 (11)0.0159 (12)−0.0077 (11)
C100.0391 (14)0.0369 (14)0.0336 (13)0.0012 (11)0.0141 (11)−0.0066 (11)
C110.0578 (17)0.0398 (15)0.0356 (14)0.0011 (13)0.0231 (13)−0.0046 (11)
C120.0444 (15)0.0334 (14)0.0324 (13)−0.0006 (11)0.0165 (12)−0.0026 (11)
C130.0485 (15)0.0327 (14)0.0336 (13)−0.0012 (12)0.0187 (12)−0.0011 (11)
C140.0400 (13)0.0296 (13)0.0376 (14)−0.0030 (11)0.0184 (11)−0.0013 (11)
C150.0605 (18)0.0359 (15)0.0404 (15)−0.0032 (13)0.0236 (14)−0.0031 (12)
C160.082 (2)0.0437 (17)0.0405 (16)0.0001 (15)0.0280 (16)0.0043 (13)
C170.079 (2)0.0344 (15)0.0556 (18)0.0057 (15)0.0293 (17)0.0109 (13)
C180.0691 (19)0.0311 (15)0.0502 (16)−0.0027 (13)0.0309 (15)−0.0047 (12)
C190.0454 (15)0.0337 (14)0.0380 (14)−0.0032 (11)0.0211 (12)−0.0013 (11)
C200.073 (2)0.0473 (17)0.0419 (16)−0.0035 (15)0.0259 (15)−0.0133 (13)
Br1—C51.896 (3)C6—H6A0.9300
S1—C111.718 (3)C7—C81.424 (3)
S1—C121.740 (2)C8—C91.359 (3)
O1—C21.375 (3)C8—H8A0.9300
O1—C11.375 (3)C9—C101.457 (3)
O2—C11.209 (3)C10—C111.355 (3)
O3—C191.374 (3)C11—H11A0.9300
O3—C201.430 (3)C13—C141.464 (3)
N1—C121.291 (3)C13—H13A0.9300
N1—C101.396 (3)C14—C151.387 (3)
N2—N31.360 (3)C14—C191.409 (3)
N2—C121.365 (3)C15—C161.377 (4)
N2—H10.9449C15—H15A0.9300
N3—C131.277 (3)C16—C171.371 (4)
C1—C91.461 (3)C16—H16A0.9300
C2—C31.379 (4)C17—C181.377 (4)
C2—C71.389 (3)C17—H17A0.9300
C3—C41.371 (4)C18—C191.379 (3)
C3—H3A0.9300C18—H18A0.9300
C4—C51.392 (4)C20—H20A0.9600
C4—H4A0.9300C20—H20B0.9600
C5—C61.361 (4)C20—H20C0.9600
C6—C71.397 (3)
C11—S1—C1287.96 (12)C11—C10—C9128.1 (2)
C2—O1—C1122.48 (18)N1—C10—C9117.2 (2)
C19—O3—C20116.75 (19)C10—C11—S1111.30 (18)
C12—N1—C10109.9 (2)C10—C11—H11A124.4
N3—N2—C12115.7 (2)S1—C11—H11A124.4
N3—N2—H1121.9N1—C12—N2124.4 (2)
C12—N2—H1121.1N1—C12—S1116.16 (17)
C13—N3—N2119.5 (2)N2—C12—S1119.44 (18)
O2—C1—O1115.2 (2)N3—C13—C14117.9 (2)
O2—C1—C9126.9 (2)N3—C13—H13A121.0
O1—C1—C9117.8 (2)C14—C13—H13A121.0
O1—C2—C3116.9 (2)C15—C14—C19117.5 (2)
O1—C2—C7120.9 (2)C15—C14—C13120.3 (2)
C3—C2—C7122.1 (2)C19—C14—C13122.1 (2)
C4—C3—C2118.9 (2)C16—C15—C14121.5 (2)
C4—C3—H3A120.5C16—C15—H15A119.3
C2—C3—H3A120.5C14—C15—H15A119.3
C3—C4—C5119.6 (3)C17—C16—C15119.9 (3)
C3—C4—H4A120.2C17—C16—H16A120.0
C5—C4—H4A120.2C15—C16—H16A120.0
C6—C5—C4121.4 (2)C16—C17—C18120.4 (3)
C6—C5—Br1119.5 (2)C16—C17—H17A119.8
C4—C5—Br1119.1 (2)C18—C17—H17A119.8
C5—C6—C7119.9 (2)C17—C18—C19119.8 (2)
C5—C6—H6A120.0C17—C18—H18A120.1
C7—C6—H6A120.0C19—C18—H18A120.1
C2—C7—C6118.0 (2)O3—C19—C18123.3 (2)
C2—C7—C8117.5 (2)O3—C19—C14115.9 (2)
C6—C7—C8124.5 (2)C18—C19—C14120.8 (2)
C9—C8—C7122.5 (2)O3—C20—H20A109.5
C9—C8—H8A118.7O3—C20—H20B109.5
C7—C8—H8A118.7H20A—C20—H20B109.5
C8—C9—C10121.4 (2)O3—C20—H20C109.5
C8—C9—C1118.7 (2)H20A—C20—H20C109.5
C10—C9—C1119.9 (2)H20B—C20—H20C109.5
C11—C10—N1114.7 (2)
C12—N2—N3—C13−177.2 (2)C1—C9—C10—C114.9 (4)
C2—O1—C1—O2178.6 (2)C8—C9—C10—N14.9 (4)
C2—O1—C1—C9−0.9 (3)C1—C9—C10—N1−173.7 (2)
C1—O1—C2—C3−176.6 (2)N1—C10—C11—S1−0.1 (3)
C1—O1—C2—C72.9 (4)C9—C10—C11—S1−178.8 (2)
O1—C2—C3—C4−179.5 (3)C12—S1—C11—C100.6 (2)
C7—C2—C3—C41.0 (4)C10—N1—C12—N2179.9 (2)
C2—C3—C4—C50.3 (4)C10—N1—C12—S11.2 (3)
C3—C4—C5—C6−1.1 (4)N3—N2—C12—N1174.9 (2)
C3—C4—C5—Br1179.5 (2)N3—N2—C12—S1−6.4 (3)
C4—C5—C6—C70.8 (4)C11—S1—C12—N1−1.1 (2)
Br1—C5—C6—C7−179.84 (19)C11—S1—C12—N2−179.8 (2)
O1—C2—C7—C6179.2 (2)N2—N3—C13—C14176.9 (2)
C3—C2—C7—C6−1.3 (4)N3—C13—C14—C15−6.5 (4)
O1—C2—C7—C8−2.6 (4)N3—C13—C14—C19176.0 (2)
C3—C2—C7—C8176.9 (2)C19—C14—C15—C160.7 (4)
C5—C6—C7—C20.4 (4)C13—C14—C15—C16−177.0 (3)
C5—C6—C7—C8−177.7 (2)C14—C15—C16—C170.9 (5)
C2—C7—C8—C90.3 (4)C15—C16—C17—C18−2.0 (5)
C6—C7—C8—C9178.4 (3)C16—C17—C18—C191.4 (5)
C7—C8—C9—C10−176.9 (2)C20—O3—C19—C185.8 (4)
C7—C8—C9—C11.7 (4)C20—O3—C19—C14−176.2 (2)
O2—C1—C9—C8179.2 (3)C17—C18—C19—O3178.1 (3)
O1—C1—C9—C8−1.4 (4)C17—C18—C19—C140.2 (4)
O2—C1—C9—C10−2.1 (4)C15—C14—C19—O3−179.3 (2)
O1—C1—C9—C10177.3 (2)C13—C14—C19—O3−1.7 (4)
C12—N1—C10—C11−0.7 (3)C15—C14—C19—C18−1.3 (4)
C12—N1—C10—C9178.2 (2)C13—C14—C19—C18176.4 (2)
C8—C9—C10—C11−176.5 (3)
D—H···AD—HH···AD···AD—H···A
N2—H1···O2i0.942.103.021 (3)164
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N2—H1⋯O2i0.942.103.021 (3)164

Symmetry code: (i) .

  4 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  (E)-6-Bromo-3-{2-[2-(4-chloro-benzyl-idene)hydrazin-yl]thia-zol-5-yl}-2H-chromen-2-one.

Authors:  Afsheen Arshad; Hasnah Osman; Chan Kit Lam; Madhukar Hemamalini; Hoong-Kun Fun
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-03-31

3.  (E)-3-(2-{2-[1-(3-Hy-droxy-phen-yl)ethyl-idene]hydrazin-yl}-1,3-thia-zol-4-yl)-2H-chromen-2-one.

Authors:  Afsheen Arshad; Hasnah Osman; Chan Kit Lam; Madhukar Hemamalini; Hoong-Kun Fun
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-04-07

4.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
  4 in total
  1 in total

1.  3-(2-Methyl-amino-1,3-thia-zol-4-yl)-2H-chromen-2-one.

Authors:  Samina Khan Yusufzai; Hasnah Osman; Aisyah Saad Abdul Rahim; Suhana Arshad; Ibrahim Abdul Razak
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-07-10
  1 in total

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