Literature DB >> 21837130

1,1-Dibenzyl-3-(3-chloro-benzo-yl)thio-urea.

Mohd Faizal Md Nasir, Ibrahim N Hassan, Bohari Yamin, W R W Daud, Mohammad B Kassim.   

Abstract

In the title compound, C(22)H(19)ClN(2)OS, the thiono and carbonyl groups are trans positioned with respect to a partially double C-N bond. The amide group is twisted relative to the thio-urea fragment, forming a dihedral angle of 46.75 (11)°. In the crystal, inter-molecular N-H⋯S and C-H⋯O hydrogen bonds link the mol-ecules into a one-dimensional polymeric structure parallel to the c axis.

Entities:  

Year:  2011        PMID: 21837130      PMCID: PMC3151829          DOI: 10.1107/S1600536811023191

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related structures and background references, see: Al-abbasi & Kassim (2011 ▶); Nasir et al. (2011 ▶). For metal complexes of benzoyl­thio­ureas, see: Weiqun et al. (2005 ▶); Circu et al. (2009 ▶). For the synthetic procedure, see: Hassan et al. (2008 ▶).

Experimental

Crystal data

C22H19ClN2OS M = 394.90 Triclinic, a = 9.503 (4) Å b = 9.650 (4) Å c = 12.487 (5) Å α = 72.422 (8)° β = 72.869 (9)° γ = 69.463 (8)° V = 999.1 (7) Å3 Z = 2 Mo Kα radiation μ = 0.31 mm−1 T = 298 K 0.28 × 0.17 × 0.13 mm

Data collection

Bruker SMART APEX CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2000 ▶) T min = 0.918, T max = 0.961 13666 measured reflections 5000 independent reflections 2879 reflections with I > 2σ(I) R int = 0.036

Refinement

R[F 2 > 2σ(F 2)] = 0.054 wR(F 2) = 0.147 S = 1.03 5000 reflections 244 parameters H-atom parameters constrained Δρmax = 0.34 e Å−3 Δρmin = −0.31 e Å−3 Data collection: SMART (Bruker, 2000 ▶); cell refinement: SAINT (Bruker, 2000 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL, PARST (Nardelli, 1995 ▶) and PLATON (Spek, 2009 ▶). Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536811023191/gk2383sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811023191/gk2383Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536811023191/gk2383Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C22H19ClN2OSZ = 2
Mr = 394.90F(000) = 412
Triclinic, P1Dx = 1.313 Mg m3
Hall symbol: -P 1Melting point: 409.15 K
a = 9.503 (4) ÅMo Kα radiation, λ = 0.71073 Å
b = 9.650 (4) ÅCell parameters from 1114 reflections
c = 12.487 (5) Åθ = 2.3–28.5°
α = 72.422 (8)°µ = 0.31 mm1
β = 72.869 (9)°T = 298 K
γ = 69.463 (8)°Block, colourless
V = 999.1 (7) Å30.28 × 0.17 × 0.13 mm
Bruker SMART APEX CCD area-detector diffractometer5000 independent reflections
Radiation source: fine-focus sealed tube2879 reflections with I > 2σ(I)
graphiteRint = 0.036
ω scansθmax = 28.5°, θmin = 2.3°
Absorption correction: multi-scan (SADABS; Bruker, 2000)h = −12→12
Tmin = 0.918, Tmax = 0.961k = −12→12
13666 measured reflectionsl = −16→16
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.054Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.147H-atom parameters constrained
S = 1.03w = 1/[σ2(Fo2) + (0.0679P)2 + 0.0522P] where P = (Fo2 + 2Fc2)/3
5000 reflections(Δ/σ)max = 0.001
244 parametersΔρmax = 0.34 e Å3
0 restraintsΔρmin = −0.31 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
S10.89445 (7)0.70137 (6)0.39746 (5)0.0651 (2)
Cl11.24059 (9)−0.15952 (8)0.53858 (7)0.0984 (3)
O11.15882 (17)0.42880 (17)0.15716 (13)0.0614 (4)
N11.01426 (17)0.43643 (17)0.33839 (14)0.0475 (4)
H10.99400.38260.40670.057*
N20.86120 (18)0.62690 (17)0.21995 (14)0.0474 (4)
C80.9214 (2)0.5863 (2)0.31191 (17)0.0454 (5)
C11.2465 (2)0.2283 (2)0.30830 (18)0.0476 (5)
C71.1378 (2)0.3712 (2)0.25868 (19)0.0482 (5)
C61.1962 (2)0.1167 (2)0.39517 (18)0.0517 (5)
H61.09200.13150.42780.062*
C100.6590 (2)0.5487 (2)0.19232 (18)0.0502 (5)
C90.8302 (2)0.5205 (2)0.1730 (2)0.0541 (5)
H9A0.87670.41700.21040.065*
H9B0.87510.53380.09140.065*
C160.7941 (2)0.7885 (2)0.17143 (19)0.0542 (5)
H16A0.81380.84940.21150.065*
H16B0.68350.80950.18420.065*
C170.8578 (3)0.8343 (2)0.04457 (19)0.0569 (6)
C51.3029 (3)−0.0172 (2)0.43277 (19)0.0607 (6)
C150.5883 (3)0.5901 (3)0.1013 (2)0.0658 (6)
H150.64720.59540.02690.079*
C41.4577 (3)−0.0385 (3)0.3883 (2)0.0708 (7)
H41.5287−0.12830.41500.085*
C21.4025 (2)0.2061 (2)0.2627 (2)0.0633 (6)
H21.43700.28040.20390.076*
C31.5060 (3)0.0740 (3)0.3045 (2)0.0751 (8)
H31.61070.06090.27520.090*
C221.0129 (3)0.7936 (3)−0.0005 (2)0.0719 (7)
H221.08050.72980.04660.086*
C110.5686 (3)0.5384 (3)0.3020 (2)0.0741 (7)
H110.61430.50880.36490.089*
C180.7596 (4)0.9279 (3)−0.0270 (2)0.0797 (8)
H180.65400.95510.00210.096*
C140.4304 (3)0.6240 (3)0.1196 (3)0.0860 (8)
H140.38380.65190.05730.103*
C211.0691 (4)0.8466 (4)−0.1150 (3)0.0994 (11)
H211.17440.8176−0.14490.119*
C190.8167 (6)0.9815 (4)−0.1415 (3)0.1121 (13)
H190.75001.0453−0.18930.135*
C200.9722 (7)0.9406 (4)−0.1848 (3)0.1165 (15)
H201.01110.9774−0.26190.140*
C120.4102 (4)0.5717 (4)0.3194 (3)0.0922 (9)
H120.35040.56330.39360.111*
C130.3428 (3)0.6166 (3)0.2279 (4)0.0907 (10)
H130.23640.64240.23930.109*
U11U22U33U12U13U23
S10.0793 (4)0.0510 (3)0.0616 (4)0.0073 (3)−0.0289 (3)−0.0249 (3)
Cl10.0963 (6)0.0616 (4)0.0962 (5)−0.0036 (4)−0.0078 (4)0.0053 (4)
O10.0552 (9)0.0614 (9)0.0517 (9)−0.0035 (7)−0.0041 (7)−0.0128 (7)
N10.0469 (9)0.0392 (8)0.0447 (9)0.0005 (7)−0.0070 (8)−0.0106 (7)
N20.0481 (9)0.0393 (9)0.0529 (10)−0.0012 (7)−0.0168 (8)−0.0152 (8)
C80.0391 (10)0.0428 (11)0.0480 (11)−0.0037 (8)−0.0078 (9)−0.0122 (9)
C10.0418 (11)0.0433 (11)0.0541 (12)−0.0008 (9)−0.0097 (9)−0.0197 (9)
C70.0428 (11)0.0468 (11)0.0532 (13)−0.0074 (9)−0.0068 (9)−0.0181 (10)
C60.0427 (11)0.0502 (12)0.0567 (13)−0.0010 (9)−0.0083 (10)−0.0210 (10)
C100.0497 (12)0.0441 (11)0.0553 (12)−0.0084 (9)−0.0111 (10)−0.0149 (9)
C90.0539 (12)0.0463 (11)0.0630 (13)−0.0027 (10)−0.0180 (11)−0.0217 (10)
C160.0556 (13)0.0414 (11)0.0614 (13)0.0017 (9)−0.0216 (11)−0.0149 (10)
C170.0731 (15)0.0413 (11)0.0611 (14)−0.0108 (11)−0.0246 (12)−0.0147 (10)
C50.0633 (15)0.0476 (12)0.0619 (14)−0.0004 (10)−0.0125 (11)−0.0180 (11)
C150.0576 (14)0.0784 (17)0.0654 (15)−0.0165 (12)−0.0158 (12)−0.0224 (13)
C40.0574 (15)0.0530 (14)0.0874 (18)0.0118 (12)−0.0208 (14)−0.0226 (13)
C20.0465 (12)0.0501 (13)0.0797 (16)−0.0031 (10)−0.0024 (11)−0.0187 (12)
C30.0410 (13)0.0644 (16)0.106 (2)0.0039 (11)−0.0051 (13)−0.0322 (16)
C220.0767 (18)0.0659 (16)0.0727 (17)−0.0243 (14)−0.0109 (14)−0.0150 (13)
C110.0800 (18)0.0793 (18)0.0590 (15)−0.0218 (15)−0.0077 (13)−0.0176 (13)
C180.110 (2)0.0598 (15)0.0720 (18)−0.0091 (15)−0.0449 (16)−0.0109 (13)
C140.0605 (17)0.101 (2)0.108 (2)−0.0165 (15)−0.0323 (17)−0.0332 (19)
C210.128 (3)0.087 (2)0.086 (2)−0.058 (2)0.019 (2)−0.0300 (19)
C190.203 (4)0.071 (2)0.069 (2)−0.033 (3)−0.059 (3)−0.0023 (17)
C200.221 (5)0.078 (2)0.060 (2)−0.074 (3)−0.007 (3)−0.0133 (17)
C120.079 (2)0.097 (2)0.095 (2)−0.0399 (18)0.0271 (18)−0.0401 (18)
C130.0533 (16)0.085 (2)0.144 (3)−0.0193 (14)−0.009 (2)−0.051 (2)
S1—C81.672 (2)C5—C41.375 (3)
Cl1—C51.731 (3)C15—C141.382 (4)
O1—C71.208 (3)C15—H150.9300
N1—C71.392 (2)C4—C31.365 (3)
N1—C81.402 (2)C4—H40.9300
N1—H10.8600C2—C31.373 (3)
N2—C81.326 (2)C2—H20.9300
N2—C91.470 (3)C3—H30.9300
N2—C161.471 (2)C22—C211.375 (4)
C1—C61.384 (3)C22—H220.9300
C1—C21.386 (3)C11—C121.388 (4)
C1—C71.488 (3)C11—H110.9300
C6—C51.383 (3)C18—C191.377 (4)
C6—H60.9300C18—H180.9300
C10—C151.374 (3)C14—C131.359 (4)
C10—C111.382 (3)C14—H140.9300
C10—C91.508 (3)C21—C201.356 (5)
C9—H9A0.9700C21—H210.9300
C9—H9B0.9700C19—C201.371 (6)
C16—C171.507 (3)C19—H190.9300
C16—H16A0.9700C20—H200.9300
C16—H16B0.9700C12—C131.357 (5)
C17—C221.372 (3)C12—H120.9300
C17—C181.378 (3)C13—H130.9300
C7—N1—C8122.70 (17)C10—C15—C14120.6 (2)
C7—N1—H1118.6C10—C15—H15119.7
C8—N1—H1118.6C14—C15—H15119.7
C8—N2—C9123.98 (17)C3—C4—C5119.2 (2)
C8—N2—C16120.06 (17)C3—C4—H4120.4
C9—N2—C16115.01 (16)C5—C4—H4120.4
N2—C8—N1117.33 (17)C3—C2—C1119.8 (2)
N2—C8—S1124.47 (15)C3—C2—H2120.1
N1—C8—S1118.19 (14)C1—C2—H2120.1
C6—C1—C2119.73 (19)C4—C3—C2121.1 (2)
C6—C1—C7122.07 (18)C4—C3—H3119.5
C2—C1—C7118.2 (2)C2—C3—H3119.5
O1—C7—N1122.69 (19)C17—C22—C21120.4 (3)
O1—C7—C1122.22 (18)C17—C22—H22119.8
N1—C7—C1115.04 (18)C21—C22—H22119.8
C5—C6—C1119.1 (2)C10—C11—C12120.7 (3)
C5—C6—H6120.4C10—C11—H11119.7
C1—C6—H6120.4C12—C11—H11119.7
C15—C10—C11118.3 (2)C19—C18—C17120.4 (3)
C15—C10—C9121.0 (2)C19—C18—H18119.8
C11—C10—C9120.7 (2)C17—C18—H18119.8
N2—C9—C10109.86 (16)C13—C14—C15120.4 (3)
N2—C9—H9A109.7C13—C14—H14119.8
C10—C9—H9A109.7C15—C14—H14119.8
N2—C9—H9B109.7C20—C21—C22120.5 (3)
C10—C9—H9B109.7C20—C21—H21119.7
H9A—C9—H9B108.2C22—C21—H21119.7
N2—C16—C17112.77 (16)C20—C19—C18119.9 (3)
N2—C16—H16A109.0C20—C19—H19120.0
C17—C16—H16A109.0C18—C19—H19120.0
N2—C16—H16B109.0C21—C20—C19119.9 (3)
C17—C16—H16B109.0C21—C20—H20120.1
H16A—C16—H16B107.8C19—C20—H20120.1
C22—C17—C18118.9 (2)C13—C12—C11119.9 (3)
C22—C17—C16121.5 (2)C13—C12—H12120.1
C18—C17—C16119.5 (2)C11—C12—H12120.1
C4—C5—C6121.1 (2)C12—C13—C14120.2 (3)
C4—C5—Cl1119.47 (18)C12—C13—H13119.9
C6—C5—Cl1119.44 (18)C14—C13—H13119.9
C9—N2—C8—N126.1 (3)C1—C6—C5—Cl1−178.21 (16)
C16—N2—C8—N1−165.58 (17)C11—C10—C15—C141.5 (4)
C9—N2—C8—S1−154.11 (16)C9—C10—C15—C14−176.4 (2)
C16—N2—C8—S114.2 (3)C6—C5—C4—C3−1.0 (4)
C7—N1—C8—N252.4 (3)Cl1—C5—C4—C3179.7 (2)
C7—N1—C8—S1−127.36 (18)C6—C1—C2—C3−0.4 (3)
C8—N1—C7—O1−12.5 (3)C7—C1—C2—C3−178.5 (2)
C8—N1—C7—C1164.86 (17)C5—C4—C3—C2−1.2 (4)
C6—C1—C7—O1−140.7 (2)C1—C2—C3—C41.9 (4)
C2—C1—C7—O137.3 (3)C18—C17—C22—C210.5 (4)
C6—C1—C7—N141.9 (3)C16—C17—C22—C21−174.9 (2)
C2—C1—C7—N1−140.1 (2)C15—C10—C11—C12−1.1 (4)
C2—C1—C6—C5−1.7 (3)C9—C10—C11—C12176.8 (2)
C7—C1—C6—C5176.25 (19)C22—C17—C18—C19−1.0 (4)
C8—N2—C9—C10110.5 (2)C16—C17—C18—C19174.5 (2)
C16—N2—C9—C10−58.3 (2)C10—C15—C14—C130.0 (4)
C15—C10—C9—N2119.3 (2)C17—C22—C21—C200.5 (4)
C11—C10—C9—N2−58.6 (3)C17—C18—C19—C200.5 (5)
C8—N2—C16—C17127.7 (2)C22—C21—C20—C19−1.1 (5)
C9—N2—C16—C17−63.0 (2)C18—C19—C20—C210.6 (5)
N2—C16—C17—C22−47.3 (3)C10—C11—C12—C13−0.7 (4)
N2—C16—C17—C18137.3 (2)C11—C12—C13—C142.3 (5)
C1—C6—C5—C42.5 (3)C15—C14—C13—C12−1.9 (5)
D—H···AD—HH···AD···AD—H···A
C16—H16A···S10.972.513.029 (3)113
N1—H1···S1i0.862.743.410 (2)136
C15—H15···O1ii0.932.503.421 (3)170
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N1—H1⋯S1i0.862.743.410 (2)136
C15—H15⋯O1ii0.932.503.421 (3)170

Symmetry codes: (i) ; (ii) .

  6 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  N-Benzoyl-N'-dialkylthiourea derivatives and their Co(III) complexes: structure, and antifungal.

Authors:  Zhou Weiqun; Yang Wen; Xie Liqun; Cheng Xianchen
Journal:  J Inorg Biochem       Date:  2005-06       Impact factor: 4.155

3.  2-Bromo-N-(dibenzyl-carbamothioyl)benzamide.

Authors:  Mohd Faizal Md Nasir; Ibrahim N Hassan; Wan Ramli Wan Daud; Bohari M Yamin; Mohammad B Kassim
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-04-29

4.  Ethyl 2-(3-benzoyl-thio-ureido)acetate.

Authors:  Ibrahim N Hassan; Bohari M Yamin; Mohammad B Kassim
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-08-09

5.  1-Benzoyl-3-ethyl-3-phenyl-thio-urea.

Authors:  Aisha A Al-Abbasi; Mohammad B Kassim
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-02-12

6.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
  6 in total
  1 in total

1.  3-(3-Meth-oxy-benzo-yl)-1,1-diphenyl-thio-urea.

Authors:  Mohd Faizal Md Nasir; Ibrahim N Hassan; Bohari M Yamin; W R W Daud; Mohammad B Kassim
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-07-09
  1 in total

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