Literature DB >> 21837109

Ethyl 2-[1,3-dioxo-6-(piperidin-1-yl)-2,3-dihydro-1H-benz[de]isoquinolin-2-yl]acetate.

Song Xia, Chun-Ling Zheng, Fei-Fei He, Ya-Bin Shi, Hai-Bo Wang.   

Abstract

In the title compound, C(21)H(22)N(2)O(4), the naphthalimide unit is almost planar (r.m.s. deviation = 0.081Å). The carboximide N atom and the five C atoms of the eth-oxy-carbonyl-methyl substituent also lie close to a common plane (r.m.s. deviation = 0.119Å), which subtends an angle of 71.06 (8)° to the naphthalamide plane. The piperidine ring adopts a chair conformation. In the crystal, inter-molecular C-H⋯O hydrogen bonds link the mol-ecules into zigzag chains along the a axis.

Entities:  

Year:  2011        PMID: 21837109      PMCID: PMC3152026          DOI: 10.1107/S1600536811022707

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For general background to applications of 1,8-naphthalimides, see: McAdam et al. (2003 ▶); Fülöp et al. (2009 ▶). For a related structure, see: Hanton et al. (2010 ▶). For bond-length data, see: Allen et al. (1987 ▶).

Experimental

Crystal data

C21H22N2O4 M = 366.41 Orthorhombic, a = 10.959 (2) Å b = 18.037 (4) Å c = 9.3330 (19) Å V = 1844.8 (6) Å3 Z = 4 Mo Kα radiation μ = 0.09 mm−1 T = 293 K 0.30 × 0.20 × 0.10 mm

Data collection

Enraf–Nonius n class="Gene">CAD-4 diffractometer Absorption correction: ψ scan (North et al., 1968 ▶) T min = 0.973, T max = 0.991 3547 measured reflections 1808 independent reflections 1280 reflections with I > 2σ(I) R int = 0.039 3 standard reflections every 200 reflections intensity decay: 1%

Refinement

R[F 2 > 2σ(F 2)] = 0.045 wR(F 2) = 0.115 S = 1.00 1808 reflections 244 parameters 2 restraints H-atom parameters constrained Δρmax = 0.21 e Å−3 Δρmin = −0.13 e Å−3 Data collection: CAD-4 EXPRESS (Enraf–n class="Chemical">Nonius, 1994 ▶); cell refinement: CAD-4 EXPRESS; data reduction: XCAD4 (Harms & Wocadlo, 1995 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: PLATON (Spek, 2009 ▶). Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536811022707/sj5150sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811022707/sj5150Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536811022707/sj5150Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C21H22N2O4Dx = 1.319 Mg m3
Mr = 366.41Melting point: 421 K
Orthorhombic, Pna21Mo Kα radiation, λ = 0.71073 Å
Hall symbol: P 2c -2nCell parameters from 25 reflections
a = 10.959 (2) Åθ = 9–13°
b = 18.037 (4) ŵ = 0.09 mm1
c = 9.3330 (19) ÅT = 293 K
V = 1844.8 (6) Å3Needle, brown
Z = 40.30 × 0.20 × 0.10 mm
F(000) = 776
Enraf–Nonius CAD-4 diffractometer1280 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.039
graphiteθmax = 25.4°, θmin = 2.2°
ω/2θ scansh = 0→13
Absorption correction: ψ scan (North et al., 1968)k = −21→21
Tmin = 0.973, Tmax = 0.991l = 0→11
3547 measured reflections3 standard reflections every 200 reflections
1808 independent reflections intensity decay: 1%
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.045Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.115H-atom parameters constrained
S = 1.00w = 1/[σ2(Fo2) + (0.060P)2] where P = (Fo2 + 2Fc2)/3
1808 reflections(Δ/σ)max < 0.001
244 parametersΔρmax = 0.21 e Å3
2 restraintsΔρmin = −0.13 e Å3
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
N10.4405 (3)0.21405 (16)0.7011 (4)0.0561 (9)
O10.2714 (3)−0.10503 (17)0.4672 (4)0.0777 (10)
C10.5640 (4)0.2215 (2)0.7609 (5)0.0621 (11)
H1A0.62370.21740.68460.074*
H1B0.57880.18180.82880.074*
N20.2974 (3)−0.13210 (17)0.7041 (4)0.0553 (8)
O20.3201 (3)−0.15994 (17)0.9379 (4)0.0747 (9)
C20.5780 (5)0.2952 (2)0.8348 (6)0.0791 (15)
H2A0.66050.30000.87130.095*
H2B0.52230.29790.91540.095*
O30.3649 (3)−0.32513 (15)0.7198 (5)0.0858 (11)
C30.5511 (5)0.3589 (3)0.7302 (7)0.0898 (16)
H3A0.55230.40580.78110.108*
H3B0.61330.36040.65640.108*
O40.4935 (3)−0.22931 (16)0.7031 (4)0.0705 (8)
C40.4263 (4)0.3472 (2)0.6620 (6)0.0717 (13)
H4A0.36350.35270.73450.086*
H4B0.41290.38480.58940.086*
C50.4158 (4)0.2712 (2)0.5944 (5)0.0670 (12)
H5A0.33440.26450.55580.080*
H5B0.47370.26690.51610.080*
C60.3992 (3)0.1420 (2)0.6730 (4)0.0509 (10)
C70.3691 (4)0.1189 (2)0.5352 (5)0.0601 (11)
H7A0.37250.15240.45950.072*
C80.3337 (4)0.0458 (3)0.5101 (5)0.0618 (12)
H8A0.31360.03110.41750.074*
C90.3280 (3)−0.0048 (2)0.6196 (5)0.0515 (10)
C100.3521 (3)0.0175 (2)0.7621 (4)0.0461 (9)
C110.3431 (3)−0.0331 (2)0.8754 (5)0.0496 (10)
C120.3581 (4)−0.0101 (2)1.0172 (5)0.0586 (11)
H12A0.3535−0.04411.09180.070*
C130.3803 (4)0.0646 (2)1.0452 (5)0.0557 (11)
H13A0.38600.08091.13950.067*
C140.3935 (4)0.1138 (2)0.9362 (5)0.0528 (10)
H14A0.40900.16330.95770.063*
C150.3844 (3)0.0918 (2)0.7894 (4)0.0460 (9)
C160.2971 (4)−0.0830 (2)0.5885 (5)0.0570 (11)
C170.3207 (4)−0.1124 (2)0.8465 (5)0.0538 (11)
C180.2784 (3)−0.21025 (19)0.6780 (6)0.0623 (12)
H18A0.2519−0.21730.57970.075*
H18B0.2143−0.22830.74050.075*
C190.3916 (4)−0.2541 (2)0.7032 (5)0.0586 (10)
C200.4684 (6)−0.3749 (3)0.7462 (10)0.131 (3)
H20A0.5438−0.35140.71640.157*
H20B0.4742−0.38610.84760.157*
C210.4499 (6)−0.4403 (3)0.6680 (9)0.145 (3)
H21A0.5188−0.47260.68050.217*
H21B0.4409−0.42850.56830.217*
H21C0.3775−0.46470.70170.217*
U11U22U33U12U13U23
N10.059 (2)0.0473 (17)0.062 (2)0.0060 (15)−0.0043 (19)0.0084 (18)
O10.086 (2)0.076 (2)0.071 (2)0.0046 (17)−0.0181 (18)−0.025 (2)
C10.055 (3)0.066 (2)0.065 (3)−0.0010 (19)−0.005 (2)0.016 (2)
N20.0492 (18)0.0507 (18)0.066 (2)−0.0017 (14)−0.0060 (18)−0.0060 (19)
O20.094 (2)0.0614 (18)0.069 (2)−0.0103 (17)0.0184 (19)0.0068 (18)
C20.087 (3)0.068 (3)0.082 (4)−0.017 (2)−0.024 (3)0.014 (3)
O30.076 (2)0.0521 (16)0.129 (3)0.0014 (15)−0.010 (2)−0.008 (2)
C30.115 (4)0.060 (3)0.095 (4)−0.020 (3)−0.017 (4)0.020 (3)
O40.0456 (15)0.0769 (19)0.089 (2)0.0008 (14)0.0091 (17)−0.0022 (19)
C40.089 (3)0.053 (2)0.073 (3)0.005 (2)0.000 (3)0.004 (2)
C50.077 (3)0.060 (3)0.064 (3)0.009 (2)−0.007 (2)0.014 (2)
C60.047 (2)0.057 (2)0.049 (3)0.0132 (17)−0.0027 (18)0.005 (2)
C70.071 (3)0.066 (3)0.043 (2)0.002 (2)−0.008 (2)0.001 (2)
C80.065 (3)0.073 (3)0.047 (3)0.008 (2)−0.012 (2)−0.005 (2)
C90.044 (2)0.056 (3)0.055 (3)0.0060 (18)−0.0017 (18)0.001 (2)
C100.0379 (19)0.054 (2)0.047 (2)0.0054 (16)−0.0007 (18)−0.008 (2)
C110.048 (2)0.050 (2)0.051 (3)−0.0010 (17)0.006 (2)0.002 (2)
C120.062 (3)0.060 (3)0.054 (3)0.004 (2)0.009 (2)0.006 (2)
C130.065 (3)0.063 (3)0.039 (2)0.000 (2)−0.003 (2)−0.001 (2)
C140.057 (3)0.049 (2)0.052 (2)−0.0009 (19)−0.005 (2)−0.002 (2)
C150.045 (2)0.049 (2)0.044 (2)0.0067 (16)0.0014 (19)−0.0080 (19)
C160.041 (2)0.063 (3)0.067 (3)0.0070 (19)−0.009 (2)−0.014 (3)
C170.040 (2)0.058 (3)0.063 (3)−0.0011 (18)0.009 (2)0.001 (2)
C180.047 (2)0.050 (2)0.090 (4)−0.0024 (17)0.002 (2)−0.011 (2)
C190.056 (2)0.054 (2)0.066 (3)0.0008 (19)0.006 (2)−0.007 (2)
C200.114 (5)0.077 (3)0.202 (9)0.036 (3)−0.058 (6)−0.030 (5)
C210.138 (6)0.103 (5)0.193 (9)0.036 (4)−0.019 (6)−0.014 (6)
N1—C61.401 (5)C6—C151.424 (6)
N1—C51.459 (5)C7—C81.395 (6)
N1—C11.470 (5)C7—H7A0.9300
O1—C161.233 (5)C8—C91.372 (6)
C1—C21.506 (6)C8—H8A0.9300
C1—H1A0.9700C9—C101.414 (6)
C1—H1B0.9700C9—C161.479 (6)
N2—C161.396 (6)C10—C111.400 (5)
N2—C171.399 (6)C10—C151.410 (5)
N2—C181.446 (4)C11—C121.397 (6)
O2—C171.209 (5)C11—C171.475 (5)
C2—C31.536 (7)C12—C131.393 (6)
C2—H2A0.9700C12—H12A0.9300
C2—H2B0.9700C13—C141.359 (6)
O3—C191.324 (5)C13—H13A0.9300
O3—C201.467 (6)C14—C151.430 (6)
C3—C41.524 (7)C14—H14A0.9300
C3—H3A0.9700C18—C191.490 (6)
C3—H3B0.9700C18—H18A0.9700
O4—C191.202 (5)C18—H18B0.9700
C4—C51.513 (6)C20—C211.402 (7)
C4—H4A0.9700C20—H20A0.9700
C4—H4B0.9700C20—H20B0.9700
C5—H5A0.9700C21—H21A0.9600
C5—H5B0.9700C21—H21B0.9600
C6—C71.391 (6)C21—H21C0.9600
C6—N1—C5117.9 (3)C8—C9—C16119.9 (4)
C6—N1—C1116.9 (3)C10—C9—C16119.9 (4)
C5—N1—C1111.5 (3)C11—C10—C15120.1 (3)
N1—C1—C2110.4 (4)C11—C10—C9120.8 (3)
N1—C1—H1A109.6C15—C10—C9119.1 (3)
C2—C1—H1A109.6C12—C11—C10120.8 (4)
N1—C1—H1B109.6C12—C11—C17118.8 (4)
C2—C1—H1B109.6C10—C11—C17120.4 (4)
H1A—C1—H1B108.1C13—C12—C11119.1 (4)
C16—N2—C17125.0 (3)C13—C12—H12A120.4
C16—N2—C18119.2 (4)C11—C12—H12A120.4
C17—N2—C18115.7 (4)C14—C13—C12120.7 (4)
C1—C2—C3110.4 (4)C14—C13—H13A119.7
C1—C2—H2A109.6C12—C13—H13A119.7
C3—C2—H2A109.6C13—C14—C15121.9 (4)
C1—C2—H2B109.6C13—C14—H14A119.1
C3—C2—H2B109.6C15—C14—H14A119.1
H2A—C2—H2B108.1C10—C15—C6119.7 (4)
C19—O3—C20116.2 (4)C10—C15—C14117.1 (4)
C4—C3—C2109.6 (4)C6—C15—C14123.1 (4)
C4—C3—H3A109.8O1—C16—N2120.4 (4)
C2—C3—H3A109.8O1—C16—C9122.7 (4)
C4—C3—H3B109.8N2—C16—C9116.9 (4)
C2—C3—H3B109.8O2—C17—N2119.3 (4)
H3A—C3—H3B108.2O2—C17—C11124.0 (4)
C5—C4—C3111.6 (4)N2—C17—C11116.7 (4)
C5—C4—H4A109.3N2—C18—C19111.7 (3)
C3—C4—H4A109.3N2—C18—H18A109.3
C5—C4—H4B109.3C19—C18—H18A109.3
C3—C4—H4B109.3N2—C18—H18B109.3
H4A—C4—H4B108.0C19—C18—H18B109.3
N1—C5—C4110.0 (4)H18A—C18—H18B107.9
N1—C5—H5A109.7O4—C19—O3124.4 (4)
C4—C5—H5A109.7O4—C19—C18125.2 (4)
N1—C5—H5B109.7O3—C19—C18110.3 (3)
C4—C5—H5B109.7C21—C20—O3108.4 (5)
H5A—C5—H5B108.2C21—C20—H20A110.0
C7—C6—N1121.9 (4)O3—C20—H20A110.0
C7—C6—C15119.2 (4)C21—C20—H20B110.0
N1—C6—C15118.9 (4)O3—C20—H20B110.0
C6—C7—C8120.3 (4)H20A—C20—H20B108.4
C6—C7—H7A119.8C20—C21—H21A109.5
C8—C7—H7A119.8C20—C21—H21B109.5
C9—C8—C7121.1 (4)H21A—C21—H21B109.5
C9—C8—H8A119.5C20—C21—H21C109.5
C7—C8—H8A119.5H21A—C21—H21C109.5
C8—C9—C10120.2 (4)H21B—C21—H21C109.5
C6—N1—C1—C2−159.0 (4)C11—C10—C15—C14−6.7 (5)
C5—N1—C1—C261.3 (5)C9—C10—C15—C14172.7 (4)
N1—C1—C2—C3−57.5 (5)C7—C6—C15—C106.8 (5)
C1—C2—C3—C453.7 (6)N1—C6—C15—C10−175.1 (3)
C2—C3—C4—C5−53.6 (6)C7—C6—C15—C14−169.4 (4)
C6—N1—C5—C4160.5 (4)N1—C6—C15—C148.8 (5)
C1—N1—C5—C4−60.2 (5)C13—C14—C15—C104.5 (5)
C3—C4—C5—N156.7 (5)C13—C14—C15—C6−179.3 (4)
C5—N1—C6—C718.9 (6)C17—N2—C16—O1−177.5 (4)
C1—N1—C6—C7−118.2 (4)C18—N2—C16—O15.7 (6)
C5—N1—C6—C15−159.2 (4)C17—N2—C16—C92.2 (6)
C1—N1—C6—C1563.7 (5)C18—N2—C16—C9−174.6 (3)
N1—C6—C7—C8177.0 (4)C8—C9—C16—O1−2.6 (6)
C15—C6—C7—C8−4.9 (6)C10—C9—C16—O1177.6 (4)
C6—C7—C8—C9−0.1 (6)C8—C9—C16—N2177.7 (4)
C7—C8—C9—C103.3 (6)C10—C9—C16—N2−2.1 (5)
C7—C8—C9—C16−176.5 (4)C16—N2—C17—O2−179.0 (4)
C8—C9—C10—C11178.1 (4)C18—N2—C17—O2−2.1 (5)
C16—C9—C10—C11−2.1 (5)C16—N2—C17—C111.8 (5)
C8—C9—C10—C15−1.3 (6)C18—N2—C17—C11178.7 (3)
C16—C9—C10—C15178.4 (3)C12—C11—C17—O2−3.6 (6)
C15—C10—C11—C124.1 (5)C10—C11—C17—O2174.7 (4)
C9—C10—C11—C12−175.3 (4)C12—C11—C17—N2175.5 (4)
C15—C10—C11—C17−174.2 (3)C10—C11—C17—N2−6.1 (5)
C9—C10—C11—C176.3 (5)C16—N2—C18—C19110.2 (4)
C10—C11—C12—C131.2 (6)C17—N2—C18—C19−66.9 (5)
C17—C11—C12—C13179.5 (4)C20—O3—C19—O42.9 (8)
C11—C12—C13—C14−3.5 (6)C20—O3—C19—C18−179.7 (5)
C12—C13—C14—C150.6 (6)N2—C18—C19—O4−20.9 (7)
C11—C10—C15—C6176.9 (3)N2—C18—C19—O3161.8 (4)
C9—C10—C15—C6−3.7 (5)C19—O3—C20—C21−139.4 (6)
D—H···AD—HH···AD···AD—H···A
C1—H1A···O2i0.972.603.455 (6)147
C1—H1B···O1ii0.972.513.373 (5)149
C5—H5A···O2iii0.972.443.219 (6)138
C18—H18A···O10.972.292.735 (6)107
C18—H18B···O4iv0.972.563.315 (5)135
C20—H20A···O40.972.272.671 (6)103
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C1—H1A⋯O2i0.972.603.455 (6)147
C1—H1B⋯O1ii0.972.513.373 (5)149
C5—H5A⋯O2iii0.972.443.219 (6)138
C18—H18B⋯O4iv0.972.563.315 (5)135

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .

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