Literature DB >> 21837105

2-[(E)-(2,4-Dichloro-benzyl-idene)amino]-isoindoline-1,3-dione.

Mohammad Asad, Chuan-Wei Oo, Hasnah Osman, Madhukar Hemamalini, Hoong-Kun Fun.   

Abstract

In the title compound, C(15)H(8)Cl(2)N(2)O(2), the mol-ecule adopts an E configuration about the central C=N double bond. The isoindoline ring is essentially planar, with a maximum deviation of 0.019 (2) Å. The dihedral angle between the isoindoline ring and the dichloro-substituted benzene ring is 6.54 (9)°. An intra-molecular C-H⋯O hydrogen bond occurs. A short Cl⋯Cl contact of 3.4027 (9) Å is present in the crystal structure. The crystal packing is further stabilized by weak C-H⋯π inter-actions.

Entities:  

Year:  2011        PMID: 21837105      PMCID: PMC3151809          DOI: 10.1107/S1600536811023063

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the coordination ability and biological activity of Schiff bases, see: Bhunora et al. (2011 ▶); Gupta & Sutar (2008 ▶); Sridhar et al., (2001 ▶); Mladenova et al. (2002 ▶); Bharti et al. (2010 ▶); Tenorio et al. (2005 ▶); Liu et al. (1992 ▶); Hodnett & Dunn (1970 ▶).

Experimental

Crystal data

C15H8Cl2N2O2 M = 319.13 Monoclinic, a = 8.0387 (8) Å b = 7.6981 (8) Å c = 22.2686 (19) Å β = 101.828 (3)° V = 1348.8 (2) Å3 Z = 4 Mo Kα radiation μ = 0.49 mm−1 T = 296 K 0.44 × 0.19 × 0.15 mm

Data collection

Bruker APEXII DUO CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2009 ▶) T min = 0.815, T max = 0.930 13900 measured reflections 3902 independent reflections 2795 reflections with I > 2σ(I) R int = 0.033

Refinement

R[F 2 > 2σ(F 2)] = 0.046 wR(F 2) = 0.113 S = 1.07 3902 reflections 190 parameters H-atom parameters constrained Δρmax = 0.30 e Å−3 Δρmin = −0.42 e Å−3 Data collection: APEX2 (Bruker, 2009 ▶); cell refinement: SAINT (Bruker, 2009 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL and PLATON (Spek, 2009 ▶). Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536811023063/rz2609sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811023063/rz2609Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536811023063/rz2609Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C15H8Cl2N2O2F(000) = 648
Mr = 319.13Dx = 1.572 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 4526 reflections
a = 8.0387 (8) Åθ = 2.8–29.8°
b = 7.6981 (8) ŵ = 0.49 mm1
c = 22.2686 (19) ÅT = 296 K
β = 101.828 (3)°Block, colourless
V = 1348.8 (2) Å30.44 × 0.19 × 0.15 mm
Z = 4
Bruker APEXII DUO CCD area-detector diffractometer3902 independent reflections
Radiation source: fine-focus sealed tube2795 reflections with I > 2σ(I)
graphiteRint = 0.033
φ and ω scansθmax = 30.0°, θmin = 1.9°
Absorption correction: multi-scan (SADABS; Bruker, 2009)h = −10→11
Tmin = 0.815, Tmax = 0.930k = −10→10
13900 measured reflectionsl = −31→29
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.046Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.113H-atom parameters constrained
S = 1.07w = 1/[σ2(Fo2) + (0.0331P)2 + 0.9203P] where P = (Fo2 + 2Fc2)/3
3902 reflections(Δ/σ)max = 0.001
190 parametersΔρmax = 0.30 e Å3
0 restraintsΔρmin = −0.42 e Å3
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cl10.72877 (6)−0.18254 (8)0.79982 (3)0.05067 (17)
Cl21.31606 (7)−0.18842 (9)0.72366 (3)0.05889 (19)
O10.58896 (19)0.1209 (2)0.93934 (8)0.0566 (5)
O21.08478 (17)0.3584 (2)1.04839 (7)0.0457 (4)
N10.9657 (2)0.1599 (2)0.94538 (8)0.0374 (4)
N20.86224 (19)0.2180 (2)0.98379 (7)0.0347 (4)
C10.9387 (2)−0.1149 (3)0.81141 (9)0.0337 (4)
C21.0327 (2)−0.1710 (3)0.76903 (9)0.0366 (4)
H2A0.9837−0.24090.73610.044*
C31.2005 (2)−0.1199 (3)0.77727 (9)0.0369 (4)
C41.2766 (2)−0.0181 (3)0.82651 (9)0.0387 (4)
H4A1.39060.01270.83190.046*
C51.1798 (2)0.0371 (3)0.86757 (9)0.0367 (4)
H5A1.22990.10640.90050.044*
C61.0085 (2)−0.0087 (3)0.86084 (8)0.0330 (4)
C70.9041 (2)0.0526 (3)0.90345 (9)0.0378 (4)
H7A0.79320.01300.89970.045*
C80.6843 (2)0.2004 (3)0.97890 (9)0.0366 (4)
C90.6452 (2)0.3000 (3)1.03100 (9)0.0339 (4)
C100.4911 (3)0.3240 (3)1.04859 (10)0.0413 (5)
H10A0.39180.27281.02710.050*
C110.4911 (3)0.4273 (3)1.09946 (10)0.0449 (5)
H11A0.38970.44581.11250.054*
C120.6395 (3)0.5040 (3)1.13147 (10)0.0491 (5)
H12A0.63560.57331.16540.059*
C130.7941 (3)0.4787 (3)1.11370 (9)0.0436 (5)
H13A0.89370.52951.13510.052*
C140.7933 (2)0.3755 (3)1.06312 (9)0.0336 (4)
C150.9360 (2)0.3247 (3)1.03399 (9)0.0338 (4)
U11U22U33U12U13U23
Cl10.0330 (2)0.0650 (4)0.0558 (3)−0.0135 (2)0.0131 (2)−0.0105 (3)
Cl20.0444 (3)0.0766 (5)0.0621 (4)−0.0071 (3)0.0259 (3)−0.0224 (3)
O10.0355 (8)0.0710 (12)0.0616 (10)−0.0063 (8)0.0057 (7)−0.0274 (9)
O20.0290 (7)0.0587 (10)0.0490 (9)−0.0036 (7)0.0069 (6)−0.0061 (7)
N10.0326 (8)0.0425 (10)0.0388 (9)0.0032 (7)0.0114 (7)−0.0030 (7)
N20.0294 (7)0.0386 (9)0.0368 (8)0.0007 (7)0.0082 (6)−0.0035 (7)
C10.0275 (8)0.0357 (10)0.0377 (10)−0.0017 (7)0.0060 (7)0.0023 (8)
C20.0338 (9)0.0388 (11)0.0370 (10)−0.0015 (8)0.0066 (8)−0.0031 (9)
C30.0322 (9)0.0411 (11)0.0394 (10)0.0022 (8)0.0123 (8)−0.0018 (9)
C40.0279 (9)0.0432 (12)0.0446 (11)−0.0031 (8)0.0068 (8)−0.0020 (9)
C50.0336 (9)0.0387 (11)0.0364 (10)−0.0007 (8)0.0036 (7)−0.0033 (8)
C60.0319 (9)0.0342 (10)0.0331 (9)0.0018 (8)0.0071 (7)0.0024 (8)
C70.0329 (9)0.0434 (12)0.0383 (10)0.0007 (8)0.0101 (8)−0.0014 (9)
C80.0293 (9)0.0395 (11)0.0408 (10)0.0015 (8)0.0065 (8)−0.0010 (9)
C90.0301 (9)0.0350 (11)0.0373 (10)0.0013 (8)0.0082 (7)0.0027 (8)
C100.0322 (9)0.0433 (12)0.0499 (12)−0.0011 (9)0.0116 (8)0.0036 (10)
C110.0407 (11)0.0473 (13)0.0517 (12)0.0051 (9)0.0216 (9)0.0036 (10)
C120.0541 (13)0.0529 (14)0.0445 (12)0.0032 (11)0.0198 (10)−0.0054 (10)
C130.0411 (11)0.0498 (13)0.0401 (11)−0.0012 (10)0.0084 (8)−0.0066 (10)
C140.0309 (9)0.0348 (10)0.0354 (9)0.0017 (8)0.0077 (7)0.0029 (8)
C150.0295 (8)0.0372 (11)0.0348 (9)−0.0003 (8)0.0071 (7)0.0015 (8)
Cl1—C11.7338 (19)C5—H5A0.9300
Cl2—C31.7383 (19)C6—C71.467 (3)
O1—C81.209 (2)C7—H7A0.9300
O2—C151.201 (2)C8—C91.477 (3)
N1—C71.268 (3)C9—C141.385 (3)
N1—N21.384 (2)C9—C101.386 (3)
N2—C151.416 (3)C10—C111.384 (3)
N2—C81.419 (2)C10—H10A0.9300
C1—C21.393 (3)C11—C121.390 (3)
C1—C61.393 (3)C11—H11A0.9300
C2—C31.381 (3)C12—C131.393 (3)
C2—H2A0.9300C12—H12A0.9300
C3—C41.384 (3)C13—C141.377 (3)
C4—C51.384 (3)C13—H13A0.9300
C4—H4A0.9300C14—C151.482 (3)
C5—C61.399 (3)
C7—N1—N2118.18 (16)O1—C8—N2125.65 (18)
N1—N2—C15117.91 (15)O1—C8—C9129.07 (18)
N1—N2—C8130.24 (16)N2—C8—C9105.28 (16)
C15—N2—C8111.63 (15)C14—C9—C10121.44 (19)
C2—C1—C6122.02 (17)C14—C9—C8108.96 (16)
C2—C1—Cl1116.91 (15)C10—C9—C8129.59 (19)
C6—C1—Cl1121.07 (15)C11—C10—C9117.2 (2)
C3—C2—C1118.21 (18)C11—C10—H10A121.4
C3—C2—H2A120.9C9—C10—H10A121.4
C1—C2—H2A120.9C10—C11—C12121.30 (19)
C2—C3—C4121.86 (18)C10—C11—H11A119.3
C2—C3—Cl2117.88 (16)C12—C11—H11A119.3
C4—C3—Cl2120.26 (15)C11—C12—C13121.2 (2)
C5—C4—C3118.67 (18)C11—C12—H12A119.4
C5—C4—H4A120.7C13—C12—H12A119.4
C3—C4—H4A120.7C14—C13—C12117.3 (2)
C4—C5—C6121.77 (18)C14—C13—H13A121.4
C4—C5—H5A119.1C12—C13—H13A121.4
C6—C5—H5A119.1C13—C14—C9121.60 (18)
C1—C6—C5117.44 (17)C13—C14—C15129.51 (18)
C1—C6—C7120.55 (17)C9—C14—C15108.90 (17)
C5—C6—C7122.01 (18)O2—C15—N2124.69 (17)
N1—C7—C6119.80 (18)O2—C15—C14130.08 (19)
N1—C7—H7A120.1N2—C15—C14105.21 (15)
C6—C7—H7A120.1
C7—N1—N2—C15174.19 (18)N2—C8—C9—C141.7 (2)
C7—N1—N2—C8−11.8 (3)O1—C8—C9—C101.8 (4)
C6—C1—C2—C30.6 (3)N2—C8—C9—C10−178.9 (2)
Cl1—C1—C2—C3−179.66 (16)C14—C9—C10—C110.3 (3)
C1—C2—C3—C41.0 (3)C8—C9—C10—C11−179.0 (2)
C1—C2—C3—Cl2−179.27 (16)C9—C10—C11—C120.1 (3)
C2—C3—C4—C5−1.6 (3)C10—C11—C12—C13−0.4 (4)
Cl2—C3—C4—C5178.68 (17)C11—C12—C13—C140.2 (4)
C3—C4—C5—C60.6 (3)C12—C13—C14—C90.2 (3)
C2—C1—C6—C5−1.5 (3)C12—C13—C14—C15−179.5 (2)
Cl1—C1—C6—C5178.73 (15)C10—C9—C14—C13−0.5 (3)
C2—C1—C6—C7177.96 (19)C8—C9—C14—C13178.99 (19)
Cl1—C1—C6—C7−1.8 (3)C10—C9—C14—C15179.29 (19)
C4—C5—C6—C10.9 (3)C8—C9—C14—C15−1.3 (2)
C4—C5—C6—C7−178.58 (19)N1—N2—C15—O2−5.7 (3)
N2—N1—C7—C6178.49 (17)C8—N2—C15—O2179.2 (2)
C1—C6—C7—N1−174.55 (19)N1—N2—C15—C14175.94 (16)
C5—C6—C7—N14.9 (3)C8—N2—C15—C140.8 (2)
N1—N2—C8—O13.4 (4)C13—C14—C15—O21.8 (4)
C15—N2—C8—O1177.8 (2)C9—C14—C15—O2−177.9 (2)
N1—N2—C8—C9−175.91 (19)C13—C14—C15—N2−180.0 (2)
C15—N2—C8—C9−1.6 (2)C9—C14—C15—N20.3 (2)
O1—C8—C9—C14−177.6 (2)
Cg1 is the centroid of the C1–C6 ring.
D—H···AD—HH···AD···AD—H···A
C7—H7A···O10.932.182.857 (2)129
C2—H2A···Cg1i0.932.813.663 (2)153
Table 1

Hydrogen-bond geometry (Å, °)

Cg1 is the centroid of the C1–C6 ring.

D—H⋯AD—HH⋯ADAD—H⋯A
C7—H7A⋯O10.932.182.857 (2)129
C2—H2ACg1i0.932.813.663 (2)153

Symmetry code: (i) .

  7 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Structure-antitumor activity correlation of some Schiff bases.

Authors:  E M Hodnett; W J Dunn
Journal:  J Med Chem       Date:  1970-07       Impact factor: 7.446

3.  Synthesis of thiosemicarbazone and 4-thiazolidinone derivatives and their in vitro anti-Toxoplasma gondii activity.

Authors:  Rômulo P Tenório; Cristiane S Carvalho; Carla S Pessanha; José G de Lima; Antônio R de Faria; Antônio J Alves; Edésio J T de Melo; Alexandre J S Góes
Journal:  Bioorg Med Chem Lett       Date:  2005-05-16       Impact factor: 2.823

4.  Synthesis and antibacterial screening of hydrazones, Schiff and Mannich bases of isatin derivatives.

Authors:  S K Sridhar; M Saravanan; A Ramesh
Journal:  Eur J Med Chem       Date:  2001 Jul-Aug       Impact factor: 6.514

5.  Synthesis, anti-bacterial and anti-fungal activities of some novel Schiff bases containing 2,4-disubstituted thiazole ring.

Authors:  S K Bharti; G Nath; R Tilak; S K Singh
Journal:  Eur J Med Chem       Date:  2009-11-06       Impact factor: 6.514

6.  Synthesis and antitumor activity of amino derivatives of pyridine-2-carboxaldehyde thiosemicarbazone.

Authors:  M C Liu; T S Lin; A C Sartorelli
Journal:  J Med Chem       Date:  1992-10-02       Impact factor: 7.446

7.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
  7 in total
  1 in total

1.  N-(1,3-Dioxo-2,3-dihydro-1H-isoindol-2-yl)-4,4''-difluoro-5'-hy-droxy-1,1':3',1''-terphenyl-4'-carboxamide.

Authors:  Hoong-Kun Fun; Tze Shyang Chia; S Samshuddin; B Narayana; B K Sarojini
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-08-01
  1 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.