Literature DB >> 21837060

3-(4-Methyl-phen-yl)-1-phenyl-3-(4,5,6,7-tetra-hydro-1,2,3-benzoselenadiazol-4-yl)propan-1-one.

J Muthukumaran, M Nishandhini, S Chitra, P Manisankar, Suman Bhattacharya, S Muthusubramanian, R Krishna, J Jeyakanthan.   

Abstract

In the title compound, C(22)H(22)N(2)OSe, the fused six-membered ring of the 4,5,6,7-tetra-hydro-benzo[d][1,2,3] selenadiazole group adopts a near to envelope (E form) conformation and the five-membered 1,2,3-selenadiazole ring is essentially planar (r.m.s. deviation = 0.0059 Å). In the crystal, adjacent mol-ecules are inter-linked through weak inter-molecular C-H⋯π inter-actions.

Entities:  

Year:  2011        PMID: 21837060      PMCID: PMC3151998          DOI: 10.1107/S160053681102174X

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For bond lengths in compounds containing a 1,2,3-selenadiazole group, see: Arsenyan et al. (2007 ▶); Saravanan et al. (2006a ▶,b ▶, 2007 ▶, 2008 ▶); Marx et al. (2007 ▶, 2008a ▶,b ▶); Gunasekaran et al. (2007a ▶,b ▶). For biological applications of 1,2,3-selenadiazole derivatives, see: Kuroda et al. (2001 ▶); El-Bahaie et al. (1990 ▶); El-Kashef et al. (1986 ▶); Plano et al. (2010 ▶); Padmavathi et al. (2002 ▶). For ring puckering analysis, see: Cremer & Pople (1975 ▶). For C—H⋯π inter­actions, see: Desiraju & Steiner (1999 ▶).

Experimental

Crystal data

C22H22N2OSe M = 409.38 Triclinic, a = 8.1485 (9) Å b = 9.7929 (9) Å c = 12.1234 (13) Å α = 98.707 (9)° β = 96.387 (9)° γ = 94.792 (9)° V = 945.36 (17) Å3 Z = 2 Mo Kα radiation μ = 2.00 mm−1 T = 293 K 0.5 × 0.40 × 0.25 mm

Data collection

Oxford Diffraction Xcalibur Eos diffractometer Absorption correction: multi-scan (CrysAlis PRO; Oxford Diffraction, 2009 ▶) T min = 0.585, T max = 1.000 8343 measured reflections 3339 independent reflections 2615 reflections with I > 2σ(I) R int = 0.055

Refinement

R[F 2 > 2σ(F 2)] = 0.037 wR(F 2) = 0.100 S = 1.00 3339 reflections 236 parameters H-atom parameters constrained Δρmax = 0.40 e Å−3 Δρmin = −0.66 e Å−3 Data collection: CrysAlis CCD (Oxford Diffraction, 2009 ▶); cell refinement: CrysAlis RED (Oxford Diffraction, 2009 ▶); data reduction: CrysAlis RED; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997 ▶) and PLATON (Spek, 2009 ▶); software used to prepare material for publication: PLATON. Crystal structure: contains datablock(s) I, New_Global_Publ_Block. DOI: 10.1107/S160053681102174X/zl2374sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S160053681102174X/zl2374Isup2.hkl Supplementary material file. DOI: 10.1107/S160053681102174X/zl2374Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C22H22N2OSeZ = 2
Mr = 409.38F(000) = 420
Triclinic, P1Dx = 1.438 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 8.1485 (9) ÅCell parameters from 4672 reflections
b = 9.7929 (9) Åθ = 2.9–29.2°
c = 12.1234 (13) ŵ = 2.00 mm1
α = 98.707 (9)°T = 293 K
β = 96.387 (9)°Block, blue
γ = 94.792 (9)°0.5 × 0.40 × 0.25 mm
V = 945.36 (17) Å3
Oxford Diffraction Xcalibur Eos diffractometer3339 independent reflections
Radiation source: fine-focus sealed tube2615 reflections with I > 2σ(I)
graphiteRint = 0.055
Detector resolution: 15.9821 pixels mm-1θmax = 25.0°, θmin = 2.9°
ω scansh = −9→9
Absorption correction: multi-scan (CrysAlis PRO; Oxford Diffraction, 2009)k = −11→11
Tmin = 0.585, Tmax = 1.000l = −14→14
8343 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.037Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.100H-atom parameters constrained
S = 1.00w = 1/[σ2(Fo2) + (0.050P)2] where P = (Fo2 + 2Fc2)/3
3339 reflections(Δ/σ)max = 0.034
236 parametersΔρmax = 0.40 e Å3
0 restraintsΔρmin = −0.66 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Se1−0.19156 (4)0.31704 (3)−0.12511 (3)0.05512 (16)
O10.3386 (3)0.0336 (3)0.32048 (18)0.0610 (6)
N1−0.0624 (3)0.1746 (2)0.0229 (2)0.0448 (6)
N2−0.2056 (3)0.1974 (3)−0.0175 (2)0.0550 (7)
C10.0719 (3)0.2396 (3)−0.0161 (2)0.0343 (6)
C20.0346 (3)0.3218 (3)−0.0942 (2)0.0368 (6)
C30.1612 (4)0.3990 (3)−0.1498 (2)0.0459 (7)
H3A0.16970.4973−0.11990.055*
H3B0.12580.3873−0.23000.055*
C40.3299 (3)0.3453 (3)−0.1294 (2)0.0423 (7)
H4A0.33140.2586−0.17980.051*
H4B0.41500.4117−0.14610.051*
C50.3690 (3)0.3219 (3)−0.0084 (2)0.0388 (6)
H5A0.36560.40830.04200.047*
H5B0.48040.29420.00280.047*
C60.2456 (3)0.2097 (3)0.0210 (2)0.0326 (6)
H60.26260.1227−0.02610.039*
C70.2761 (3)0.1843 (3)0.1445 (2)0.0327 (6)
H70.18380.11850.15490.039*
C80.2757 (3)0.3124 (3)0.2321 (2)0.0336 (6)
C90.1304 (4)0.3465 (3)0.2740 (2)0.0442 (7)
H90.03210.29010.24730.053*
C100.1276 (4)0.4621 (3)0.3547 (2)0.0503 (8)
H100.02780.48160.38100.060*
C110.2703 (4)0.5492 (3)0.3970 (2)0.0501 (8)
C120.4156 (4)0.5161 (3)0.3552 (2)0.0508 (8)
H120.51370.57270.38200.061*
C130.4181 (3)0.4012 (3)0.2750 (2)0.0415 (7)
H130.51800.38230.24860.050*
C140.2685 (5)0.6764 (4)0.4855 (3)0.0784 (12)
H14A0.26680.75770.45000.118*
H14B0.36600.68550.53930.118*
H14C0.17140.66650.52290.118*
C150.4339 (3)0.1113 (3)0.1603 (2)0.0381 (6)
H15A0.43230.03740.09700.046*
H15B0.52930.17740.15990.046*
C160.4547 (3)0.0505 (3)0.2673 (2)0.0362 (6)
C170.6188 (3)0.0024 (2)0.3039 (2)0.0328 (6)
C180.7605 (3)0.0330 (3)0.2545 (2)0.0419 (7)
H180.75620.08600.19690.050*
C190.9086 (4)−0.0160 (3)0.2917 (3)0.0579 (8)
H191.00400.00530.25940.069*
C200.9149 (4)−0.0951 (3)0.3752 (3)0.0603 (9)
H201.0144−0.12810.39900.072*
C210.7756 (4)−0.1266 (3)0.4247 (3)0.0575 (9)
H210.7810−0.18040.48170.069*
C220.6269 (4)−0.0777 (3)0.3890 (2)0.0459 (7)
H220.5325−0.09870.42230.055*
U11U22U33U12U13U23
Se10.0423 (2)0.0661 (3)0.0560 (2)0.01699 (17)−0.00317 (16)0.00744 (17)
O10.0453 (13)0.0959 (17)0.0575 (14)0.0249 (12)0.0249 (11)0.0392 (13)
N10.0341 (14)0.0493 (15)0.0504 (15)0.0004 (11)0.0051 (11)0.0081 (12)
N20.0353 (15)0.0650 (17)0.0626 (17)0.0015 (13)0.0057 (12)0.0061 (13)
C10.0360 (15)0.0315 (14)0.0331 (14)0.0009 (12)0.0043 (11)−0.0008 (11)
C20.0379 (16)0.0372 (15)0.0332 (14)0.0080 (12)0.0015 (12)−0.0011 (11)
C30.0564 (19)0.0429 (16)0.0401 (16)0.0054 (14)0.0033 (14)0.0139 (13)
C40.0456 (18)0.0457 (16)0.0360 (15)−0.0015 (13)0.0094 (13)0.0085 (13)
C50.0340 (15)0.0472 (16)0.0372 (15)0.0014 (13)0.0066 (12)0.0123 (12)
C60.0319 (14)0.0349 (14)0.0311 (14)0.0036 (11)0.0060 (11)0.0036 (11)
C70.0284 (14)0.0356 (14)0.0358 (14)0.0026 (11)0.0069 (11)0.0093 (11)
C80.0378 (16)0.0369 (15)0.0291 (13)0.0077 (12)0.0063 (11)0.0109 (11)
C90.0369 (16)0.0501 (17)0.0451 (17)0.0063 (13)0.0056 (13)0.0049 (13)
C100.054 (2)0.0575 (19)0.0429 (17)0.0220 (17)0.0139 (15)0.0045 (14)
C110.075 (2)0.0421 (17)0.0343 (16)0.0160 (17)0.0026 (15)0.0064 (13)
C120.059 (2)0.0469 (18)0.0418 (17)−0.0043 (15)−0.0039 (15)0.0045 (14)
C130.0398 (17)0.0460 (16)0.0385 (15)0.0034 (13)0.0058 (12)0.0057 (13)
C140.110 (3)0.058 (2)0.063 (2)0.023 (2)0.005 (2)−0.0098 (18)
C150.0382 (16)0.0398 (15)0.0397 (15)0.0099 (13)0.0106 (12)0.0094 (12)
C160.0387 (16)0.0383 (15)0.0329 (14)0.0055 (12)0.0092 (12)0.0054 (11)
C170.0357 (15)0.0295 (13)0.0316 (14)0.0050 (11)0.0031 (11)−0.0003 (11)
C180.0355 (16)0.0407 (16)0.0492 (17)0.0031 (13)0.0058 (13)0.0070 (13)
C190.0358 (18)0.063 (2)0.073 (2)0.0031 (15)0.0055 (15)0.0082 (18)
C200.049 (2)0.066 (2)0.061 (2)0.0204 (17)−0.0099 (17)0.0025 (17)
C210.072 (2)0.063 (2)0.0398 (17)0.0220 (18)−0.0018 (16)0.0138 (15)
C220.0521 (18)0.0523 (18)0.0353 (15)0.0132 (14)0.0070 (13)0.0079 (13)
N1—N21.266 (3)C12—C111.383 (4)
N1—C11.384 (3)C12—H120.9300
Se1—C21.834 (3)C13—C121.375 (4)
Se1—N21.887 (3)C13—C81.391 (4)
C1—C21.358 (4)C13—H130.9300
C3—C21.506 (4)C14—H14A0.9600
C3—H3A0.9700C14—H14B0.9600
C3—H3B0.9700C14—H14C0.9600
C4—C51.521 (3)C15—C161.506 (3)
C4—C31.521 (4)C15—C71.531 (3)
C4—H4A0.9700C15—H15A0.9700
C4—H4B0.9700C15—H15B0.9700
C5—H5A0.9700O1—C161.216 (3)
C5—H5B0.9700C17—C221.386 (3)
C6—C11.502 (3)C17—C181.390 (4)
C6—C51.535 (3)C17—C161.498 (3)
C6—C71.552 (3)C18—C191.390 (4)
C6—H60.9800C18—H180.9300
C7—C81.517 (3)C19—C201.364 (4)
C7—H70.9800C19—H190.9300
C9—C81.386 (4)C20—H200.9300
C9—C101.382 (4)C21—C201.375 (5)
C9—H90.9300C21—H210.9300
C10—C111.382 (4)C22—C211.389 (4)
C10—H100.9300C22—H220.9300
C11—C141.518 (4)
N1—N2—Se1110.78 (19)C10—C9—H9119.1
N1—C1—C6120.6 (2)C10—C11—C14121.7 (3)
N2—N1—C1117.2 (2)C11—C14—H14A109.5
C1—C6—C5109.0 (2)C11—C14—H14B109.5
C1—C6—C7114.5 (2)C11—C10—C9121.4 (3)
C1—C6—H6106.1C11—C10—H10119.3
C1—C2—C3124.5 (2)C11—C12—H12119.3
C1—C2—Se1109.5 (2)C11—C14—H14C109.5
C2—Se1—N286.70 (11)C12—C11—C10117.2 (3)
C2—C1—N1115.8 (2)C12—C11—C14121.0 (3)
C2—C1—C6123.5 (2)C12—C13—C8122.0 (3)
C2—C3—C4110.6 (2)C12—C13—H13119.0
C2—C3—H3A109.5C13—C8—C7122.8 (2)
C2—C3—H3B109.5C13—C12—C11121.3 (3)
C3—C4—H4A109.3C13—C12—H12119.3
C3—C4—H4B109.3H14A—C14—H14B109.5
C3—C2—Se1125.89 (19)H14A—C14—H14C109.5
H3A—C3—H3B108.1H14B—C14—H14C109.5
C4—C5—C6111.9 (2)C15—C7—C6109.07 (19)
C4—C5—H5A109.2C15—C7—H7106.6
C4—C5—H5B109.2H15A—C15—H15B107.7
H4A—C4—H4B107.9C16—C15—C7113.9 (2)
C4—C3—H3A109.5C16—C15—H15A108.8
C4—C3—H3B109.5C16—C15—H15B108.8
C5—C6—C7114.3 (2)O1—C16—C17120.1 (2)
C5—C6—H6106.1O1—C16—C15121.0 (2)
C5—C4—C3111.7 (2)C17—C18—H18120.2
C5—C4—H4A109.3C17—C22—H22119.9
C5—C4—H4B109.3C17—C16—C15118.8 (2)
H5A—C5—H5B107.9C18—C17—C16122.5 (2)
C6—C7—H7106.6C18—C19—H19119.8
C6—C5—H5A109.2C19—C18—C17119.6 (3)
C6—C5—H5B109.2C19—C18—H18120.2
C7—C6—H6106.1C19—C20—C21120.7 (3)
C7—C15—H15A108.8C19—C20—H20119.6
C7—C15—H15B108.8C20—C21—C22119.6 (3)
C8—C9—C10121.7 (3)C20—C21—H21120.2
C8—C9—H9119.1C20—C19—C18120.3 (3)
C8—C13—H13119.0C20—C19—H19119.8
C8—C7—C15113.0 (2)C21—C22—C17120.2 (3)
C8—C7—C6114.5 (2)C21—C22—H22119.9
C8—C7—H7106.6C21—C20—H20119.6
C9—C10—H10119.3C22—C17—C18119.5 (2)
C9—C8—C13116.4 (3)C22—C17—C16118.0 (2)
C9—C8—C7120.8 (2)C22—C21—H21120.2
N1—C1—C2—C3−178.4 (2)C7—C15—C16—C17−167.7 (2)
N1—C1—C2—Se1−0.9 (3)C8—C13—C12—C11−0.3 (4)
N2—N1—C1—C20.1 (4)C8—C9—C10—C110.1 (4)
N2—N1—C1—C6−175.4 (2)C9—C10—C11—C120.1 (4)
N2—Se1—C2—C11.03 (19)C9—C10—C11—C14180.0 (3)
N2—Se1—C2—C3178.5 (2)C10—C9—C8—C13−0.4 (4)
C1—N1—N2—Se10.7 (3)C10—C9—C8—C7179.4 (2)
C1—C6—C5—C4−48.7 (3)C12—C13—C8—C90.5 (4)
C1—C6—C7—C8−70.1 (3)C12—C13—C8—C7−179.3 (2)
C1—C6—C7—C15162.1 (2)C13—C12—C11—C100.0 (4)
C2—Se1—N2—N1−1.0 (2)C13—C12—C11—C14−179.9 (3)
C3—C4—C5—C663.0 (3)C15—C7—C8—C9−143.5 (2)
C4—C3—C2—C114.1 (4)C15—C7—C8—C1336.2 (3)
C4—C3—C2—Se1−162.95 (19)C16—C17—C18—C19−179.4 (3)
C5—C6—C1—C220.0 (3)C16—C17—C22—C21179.0 (3)
C5—C6—C1—N1−164.9 (2)C16—C15—C7—C865.3 (3)
C5—C6—C7—C856.6 (3)C16—C15—C7—C6−166.1 (2)
C5—C6—C7—C15−71.1 (3)C17—C22—C21—C200.1 (4)
C5—C4—C3—C2−42.7 (3)C17—C18—C19—C200.8 (5)
C6—C1—C2—C3−3.1 (4)C18—C19—C20—C21−0.6 (5)
C6—C1—C2—Se1174.40 (19)C18—C17—C16—O1−172.4 (3)
C6—C7—C8—C990.8 (3)C18—C17—C22—C210.1 (4)
C6—C7—C8—C13−89.5 (3)C18—C17—C16—C1511.4 (4)
C7—C6—C5—C4−178.3 (2)C22—C17—C18—C19−0.6 (4)
C7—C6—C1—C2149.4 (2)C22—C17—C16—O18.8 (4)
C7—C6—C1—N1−35.5 (3)C22—C17—C16—C15−167.4 (2)
C7—C15—C16—O116.1 (4)C22—C21—C20—C190.2 (5)
  6 in total

1.  Synthesis and biological activity of some azoles and azines.

Authors:  S el-Bahaie; M G Assy; M M Hassanien
Journal:  Pharmazie       Date:  1990-10       Impact factor: 1.267

2.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

3.  Synthesis of highly substituted 2,3-dihydro-1H-pyrrole derivatives via a tandem regioselective addition of nitrones to 1,3-enynes with subsequent rearrangement.

Authors:  Sivaperuman Saravanan; Ismail Abulkalam Azath; Shanmugam Muthusubramanian
Journal:  J Org Chem       Date:  2008-02-22       Impact factor: 4.354

4.  Diethyl 2-[(4-nitro-phen-yl)(4-phenyl-1,2,3-selenadiazol-5-yl)meth-yl]malonate.

Authors:  A Marx; S Saravanan; S Muthusubramanian; V Manivannan; Nigam P Rath
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-03-20

5.  4-(4-Chloro-phen-yl)-5-[1-(4-chloro-phenyl)-2-methyl-2-nitro-prop-yl]-1,2,3-selenadiazole.

Authors:  A Marx; S Saravanan; S Muthusubramanian; V Manivannan; Nigam P Rath
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-01-04

6.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
  6 in total

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