Literature DB >> 21836966

Poly[aqua-bis-[μ(2)-2-(pyridin-4-ylsulfan-yl)acetato]-zinc].

Zhi-Chao Wang1, Bo Ding, Xiu-Guang Wang, Xiao-Jun Zhao.   

Abstract

The crystal structure of the title complex, [Zn(C(7)H(6)NO(2)S)(2)(H(2)O)](n), consists of extended layers parallel to (001) with n class="Chemical">2-(pyridin-4-ylsulfan-yl)acetate ligands bridging the Zn(II) atoms. The Zn(II) atom shows a distorted penta-gonal-bipyramidal coordination environment. The Zn(II) and one O atom are situated on a crystallographic twofold rotation axis. In the crystal, intra-layer O-H⋯O hydrogen-bond inter-actions help to consolidate the coordination layer.

Entities:  

Year:  2011        PMID: 21836966      PMCID: PMC3151789          DOI: 10.1107/S1600536811024512

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For metal complexes with polycarboxyl­ate aromatic ligands and their applications, see: Yang et al. (2007 ▶, 2010 ▶); Yu et al. (2010 ▶). For solid-state structures of n class="Chemical">metal complexes with pyridine-4-sulfanyl-acetate ligands, see Wang et al. (2011 ▶); Kondo et al. (2002 ▶).

Experimental

Crystal data

[Zn(n class="CellLine">C7H6NO2S)2(H2O)] M = 419.76 Monoclinic, a = 16.057 (3) Å b = 6.3709 (10) Å c = 15.630 (3) Å β = 95.393 (4)° V = 1591.8 (5) Å3 Z = 4 Mo Kα radiation μ = 1.83 mm−1 T = 296 K 0.20 × 0.17 × 0.16 mm

Data collection

Bruker APEXII CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.711, T max = 0.758 3842 measured reflections 1403 independent reflections 1308 reflections with I > 2σ(I) R int = 0.016

Refinement

R[F 2 > 2σ(F 2)] = 0.028 wR(F 2) = 0.072 S = 1.04 1403 reflections 110 parameters H-atom parameters constrained Δρmax = 0.57 e Å−3 Δρmin = −0.34 e Å−3 Data collection: APEX2 (Bruker, 2003 ▶); cell refinement: SAINT (Bruker, 2001 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶) and n class="Disease">DIAMOND (Brandenburg & Berndt, 1999 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536811024512/im2292sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811024512/im2292Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Zn(C7H6NO2S)2(H2O)]F(000) = 856
Mr = 419.76Dx = 1.752 Mg m3
Monoclinic, C2/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -C 2ycCell parameters from 3018 reflections
a = 16.057 (3) Åθ = 2.6–27.8°
b = 6.3709 (10) ŵ = 1.83 mm1
c = 15.630 (3) ÅT = 296 K
β = 95.393 (4)°Block, colourless
V = 1591.8 (5) Å30.20 × 0.17 × 0.16 mm
Z = 4
Bruker APEXII CCD area-detector diffractometer1403 independent reflections
Radiation source: fine-focus sealed tube1308 reflections with I > 2σ(I)
graphiteRint = 0.016
φ and ω scansθmax = 25.0°, θmin = 2.6°
Absorption correction: multi-scan (SADABS; Sheldrick, 1996)h = −18→8
Tmin = 0.711, Tmax = 0.758k = −7→7
3842 measured reflectionsl = −17→18
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.028Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.072H-atom parameters constrained
S = 1.04w = 1/[σ2(Fo2) + (0.0333P)2 + 2.8608P] where P = (Fo2 + 2Fc2)/3
1403 reflections(Δ/σ)max < 0.001
110 parametersΔρmax = 0.57 e Å3
0 restraintsΔρmin = −0.34 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Zn10.50000.96825 (6)0.25000.03315 (15)
S10.12091 (5)0.98792 (11)0.03086 (5)0.0547 (2)
N10.37305 (12)0.9762 (3)0.19086 (13)0.0350 (4)
O10.03140 (13)0.7681 (4)0.16602 (14)0.0766 (7)
O20.05159 (15)0.4525 (4)0.12413 (14)0.0710 (7)
O30.50000.6356 (4)0.25000.0511 (7)
H3'0.48450.59270.29540.077*
C10.21478 (15)0.9755 (4)0.09745 (16)0.0366 (5)
C20.24687 (15)0.7966 (4)0.13868 (17)0.0429 (6)
H20.21620.67260.13600.051*
C30.32493 (15)0.8043 (4)0.18384 (17)0.0445 (6)
H30.34540.68250.21110.053*
C40.34017 (16)1.1504 (4)0.15408 (17)0.0432 (6)
H40.37131.27350.15970.052*
C50.26277 (16)1.1574 (4)0.10832 (18)0.0458 (6)
H50.24251.28350.08460.055*
C60.08449 (15)0.7230 (4)0.02936 (15)0.0384 (5)
H6A0.03890.7099−0.01560.046*
H6B0.12940.63250.01420.046*
C70.05446 (15)0.6435 (5)0.11276 (16)0.0481 (7)
U11U22U33U12U13U23
Zn10.0299 (2)0.0337 (2)0.0348 (2)0.000−0.00208 (15)0.000
S10.0409 (4)0.0454 (4)0.0725 (5)−0.0058 (3)−0.0227 (3)0.0140 (3)
N10.0325 (10)0.0370 (11)0.0346 (10)−0.0009 (8)−0.0018 (8)0.0017 (8)
O10.0574 (13)0.121 (2)0.0539 (12)−0.0035 (13)0.0178 (10)−0.0277 (13)
O20.0762 (16)0.0738 (16)0.0580 (13)−0.0330 (13)−0.0205 (11)0.0193 (11)
O30.0532 (16)0.0350 (13)0.0644 (17)0.0000.0022 (13)0.000
C10.0305 (12)0.0402 (13)0.0383 (12)−0.0005 (10)−0.0013 (10)0.0013 (10)
C20.0331 (13)0.0370 (14)0.0574 (15)−0.0068 (10)−0.0020 (11)0.0082 (12)
C30.0362 (13)0.0403 (14)0.0554 (15)−0.0010 (11)−0.0040 (11)0.0138 (12)
C40.0401 (13)0.0344 (13)0.0529 (15)−0.0055 (11)−0.0067 (11)0.0005 (11)
C50.0428 (14)0.0321 (13)0.0598 (16)0.0004 (11)−0.0101 (12)0.0059 (12)
C60.0336 (12)0.0466 (14)0.0341 (12)−0.0047 (11)−0.0023 (9)−0.0056 (10)
C70.0284 (12)0.077 (2)0.0368 (13)−0.0153 (13)−0.0071 (10)−0.0071 (14)
Zn1—O32.119 (3)O2—Zn1iv2.208 (3)
Zn1—N12.158 (2)O3—H3'0.8200
Zn1—N1i2.158 (2)C1—C21.384 (3)
Zn1—O2ii2.208 (3)C1—C51.393 (3)
Zn1—O2iii2.208 (3)C2—C31.380 (3)
Zn1—O1ii2.398 (3)C2—H20.9300
Zn1—O1iii2.398 (3)C3—H30.9300
S1—C11.751 (2)C4—C51.375 (4)
S1—C61.786 (3)C4—H40.9300
N1—C41.336 (3)C5—H50.9300
N1—C31.338 (3)C6—C71.519 (4)
O1—C71.232 (4)C6—H6A0.9700
O1—Zn1iv2.398 (3)C6—H6B0.9700
O2—C71.231 (4)
O3—Zn1—N191.34 (5)C7—O2—Zn1iv96.1 (2)
O3—Zn1—N1i91.34 (5)Zn1—O3—H3'109.5
N1—Zn1—N1i177.32 (10)C2—C1—C5116.8 (2)
O3—Zn1—O2ii87.40 (6)C2—C1—S1125.16 (19)
N1—Zn1—O2ii87.95 (8)C5—C1—S1118.04 (19)
N1i—Zn1—O2ii92.17 (8)C3—C2—C1119.3 (2)
O3—Zn1—O2iii87.40 (6)C3—C2—H2120.4
N1—Zn1—O2iii92.17 (8)C1—C2—H2120.4
N1i—Zn1—O2iii87.96 (8)N1—C3—C2124.1 (2)
O2ii—Zn1—O2iii174.79 (13)N1—C3—H3118.0
O3—Zn1—O1ii142.81 (5)C2—C3—H3118.0
N1—Zn1—O1ii88.69 (8)N1—C4—C5123.5 (2)
N1i—Zn1—O1ii89.18 (7)N1—C4—H4118.2
O2ii—Zn1—O1ii55.43 (8)C5—C4—H4118.2
O2iii—Zn1—O1ii129.77 (8)C4—C5—C1119.9 (2)
O3—Zn1—O1iii142.81 (5)C4—C5—H5120.0
N1—Zn1—O1iii89.18 (7)C1—C5—H5120.0
N1i—Zn1—O1iii88.69 (8)C7—C6—S1115.73 (18)
O2ii—Zn1—O1iii129.78 (8)C7—C6—H6A108.3
O2iii—Zn1—O1iii55.43 (8)S1—C6—H6A108.3
O1ii—Zn1—O1iii74.38 (11)C7—C6—H6B108.3
C1—S1—C6103.16 (11)S1—C6—H6B108.3
C4—N1—C3116.3 (2)H6A—C6—H6B107.4
C4—N1—Zn1121.53 (16)O2—C7—O1121.4 (3)
C3—N1—Zn1122.05 (16)O2—C7—C6118.2 (3)
C7—O1—Zn1iv87.0 (2)O1—C7—C6120.3 (3)
O3—Zn1—N1—C4−163.91 (19)C4—N1—C3—C22.8 (4)
N1i—Zn1—N1—C416.09 (19)Zn1—N1—C3—C2−172.8 (2)
O2ii—Zn1—N1—C4108.7 (2)C1—C2—C3—N10.0 (4)
O2iii—Zn1—N1—C4−76.5 (2)C3—N1—C4—C5−2.4 (4)
O1ii—Zn1—N1—C453.3 (2)Zn1—N1—C4—C5173.3 (2)
O1iii—Zn1—N1—C4−21.1 (2)N1—C4—C5—C1−0.9 (4)
O3—Zn1—N1—C311.5 (2)C2—C1—C5—C43.7 (4)
N1i—Zn1—N1—C3−168.5 (2)S1—C1—C5—C4−174.5 (2)
O2ii—Zn1—N1—C3−75.8 (2)C1—S1—C6—C770.1 (2)
O2iii—Zn1—N1—C399.0 (2)Zn1iv—O2—C7—O1−0.1 (3)
O1ii—Zn1—N1—C3−131.3 (2)Zn1iv—O2—C7—C6−177.97 (17)
O1iii—Zn1—N1—C3154.3 (2)Zn1iv—O1—C7—O20.1 (3)
C6—S1—C1—C2−1.8 (3)Zn1iv—O1—C7—C6177.9 (2)
C6—S1—C1—C5176.2 (2)S1—C6—C7—O2−159.5 (2)
C5—C1—C2—C3−3.2 (4)S1—C6—C7—O122.6 (3)
S1—C1—C2—C3174.8 (2)
D—H···AD—HH···AD···AD—H···A
O3—H3'···O1v0.822.182.754 (3)128
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O3—H3′⋯O1i0.822.182.754 (3)128

Symmetry code: (i) .

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