Literature DB >> 21754673

Tetra-aqua-bis-[2-(4-pyridyl-sulfan-yl)acetato-κN]nickel(II).

Jing-Yi Wang1, Xiu-Guang Wang, Xiao-Jun Zhao.   

Abstract

In the centrosymmetric title complex, [Ni(C(7)H(6)NO(2)S)(2)(H(2)O)(4)], the Ni(II) atom, located on a centre of inversion, is coordinated by two N atoms from two 2-(4-pyridyl-sulfan-yl)acetate ligands and four water O atoms in an octa-hedral geometry. In the crystal, inter-molecular O-H⋯O hydrogen bonds between the coordinated water mol-ecules and the carboxyl-ate group of the anionic 2-(4-pyridyl-sulfan-yl)acetate ligands link these discrete mononuclear units into a three-dimensional network.

Entities:  

Year:  2011        PMID: 21754673      PMCID: PMC3120356          DOI: 10.1107/S1600536811019131

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For structures and applications of metal complexes with polycarboxyl­ate-based pyridine ligands, see: Zhao et al. (2010 ▶); Wang et al. (2007 ▶). For metal complexes with 2-(4-pyridyl­sulfan­yl)acetate ligands, see: Kondo et al. (2002 ▶); Zhang et al. (2004 ▶); Qin et al. (2004 ▶).

Experimental

Crystal data

[Ni(C7H6NO2S)2(H2O)4] M = 467.15 Triclinic, a = 6.3577 (4) Å b = 7.0330 (5) Å c = 11.7624 (8) Å α = 92.713 (1)° β = 103.440 (1)° γ = 115.120 (1)° V = 456.75 (5) Å3 Z = 1 Mo Kα radiation μ = 1.34 mm−1 T = 296 K 0.22 × 0.20 × 0.14 mm

Data collection

Bruker APEXII CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2001 ▶) T min = 0.758, T max = 0.835 2358 measured reflections 1610 independent reflections 1525 reflections with I > 2σ(I) R int = 0.008

Refinement

R[F 2 > 2σ(F 2)] = 0.022 wR(F 2) = 0.061 S = 1.05 1610 reflections 124 parameters H-atom parameters constrained Δρmax = 0.22 e Å−3 Δρmin = −0.28 e Å−3 Data collection: APEX2 (Bruker, 2003 ▶); cell refinement: SAINT (Bruker, 2001 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶) and DIAMOND (Brandenburg & Berndt, 1999 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536811019131/bt5549sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536811019131/bt5549Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Ni(C7H6NO2S)2(H2O)4]Z = 1
Mr = 467.15F(000) = 242
Triclinic, P1Dx = 1.698 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 6.3577 (4) ÅCell parameters from 2208 reflections
b = 7.0330 (5) Åθ = 3.2–27.8°
c = 11.7624 (8) ŵ = 1.34 mm1
α = 92.713 (1)°T = 296 K
β = 103.440 (1)°Block, blue
γ = 115.120 (1)°0.22 × 0.20 × 0.14 mm
V = 456.75 (5) Å3
Bruker APEXII CCD area-detector diffractometer1610 independent reflections
Radiation source: fine-focus sealed tube1525 reflections with I > 2σ(I)
graphiteRint = 0.008
φ and ω scansθmax = 25.0°, θmin = 1.8°
Absorption correction: multi-scan (SADABS; Bruker, 2001)h = −7→7
Tmin = 0.758, Tmax = 0.835k = −5→8
2358 measured reflectionsl = −13→13
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.022Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.061H-atom parameters constrained
S = 1.05w = 1/[σ2(Fo2) + (0.0331P)2 + 0.2312P] where P = (Fo2 + 2Fc2)/3
1610 reflections(Δ/σ)max = 0.001
124 parametersΔρmax = 0.22 e Å3
0 restraintsΔρmin = −0.28 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Ni10.00000.00000.00000.02365 (11)
S10.72786 (9)0.33945 (8)0.54727 (4)0.03489 (14)
O10.5787 (3)0.2690 (3)0.84929 (12)0.0430 (4)
O20.9194 (3)0.4387 (2)0.79704 (12)0.0423 (4)
O30.2259 (2)0.2716 (2)−0.05684 (11)0.0347 (3)
H3A0.13770.3317−0.08330.052*
H3B0.35440.3065−0.07830.052*
O40.1770 (2)−0.1742 (2)−0.03636 (11)0.0302 (3)
H4A0.2585−0.18760.02840.045*
H4B0.0891−0.2861−0.08780.045*
N10.2203 (3)0.1150 (2)0.17292 (13)0.0275 (3)
C10.5198 (3)0.2521 (3)0.40628 (15)0.0268 (4)
C20.2691 (3)0.1584 (3)0.38241 (16)0.0307 (4)
H20.19700.14010.44400.037*
C30.1292 (3)0.0933 (3)0.26627 (16)0.0315 (4)
H3−0.03810.03070.25170.038*
C40.4625 (3)0.2085 (3)0.19676 (16)0.0313 (4)
H40.52980.22690.13340.038*
C50.6160 (3)0.2784 (3)0.30962 (16)0.0312 (4)
H50.78270.34270.32160.037*
C60.5391 (3)0.2753 (3)0.64667 (15)0.0301 (4)
H6A0.44210.35200.63480.036*
H6B0.43040.12400.62960.036*
C70.6951 (3)0.3354 (3)0.77521 (16)0.0306 (4)
U11U22U33U12U13U23
Ni10.02087 (17)0.03278 (19)0.01705 (17)0.01169 (14)0.00582 (12)0.00240 (12)
S10.0305 (3)0.0442 (3)0.0201 (2)0.0099 (2)0.00367 (18)0.0011 (2)
O10.0413 (8)0.0722 (10)0.0279 (7)0.0330 (8)0.0153 (6)0.0169 (7)
O20.0346 (8)0.0547 (9)0.0266 (7)0.0118 (7)0.0058 (6)0.0018 (6)
O30.0292 (7)0.0405 (7)0.0353 (7)0.0138 (6)0.0139 (6)0.0101 (6)
O40.0297 (6)0.0415 (7)0.0210 (6)0.0189 (6)0.0049 (5)0.0013 (5)
N10.0264 (8)0.0353 (8)0.0218 (7)0.0146 (7)0.0075 (6)0.0035 (6)
C10.0321 (9)0.0247 (8)0.0219 (9)0.0131 (7)0.0044 (7)0.0015 (7)
C20.0327 (10)0.0376 (10)0.0221 (9)0.0146 (8)0.0104 (7)0.0042 (8)
C30.0272 (9)0.0424 (11)0.0244 (9)0.0147 (8)0.0081 (8)0.0039 (8)
C40.0304 (10)0.0406 (10)0.0228 (9)0.0146 (8)0.0103 (7)0.0028 (8)
C50.0254 (9)0.0374 (10)0.0270 (9)0.0115 (8)0.0066 (7)0.0011 (8)
C60.0337 (10)0.0320 (9)0.0237 (9)0.0143 (8)0.0070 (8)0.0055 (7)
C70.0361 (10)0.0358 (10)0.0233 (9)0.0198 (9)0.0073 (8)0.0041 (7)
Ni1—O42.0727 (12)N1—C31.342 (2)
Ni1—O4i2.0727 (12)N1—C41.344 (2)
Ni1—N12.0762 (15)C1—C21.392 (3)
Ni1—N1i2.0762 (15)C1—C51.396 (3)
Ni1—O3i2.0967 (13)C2—C31.377 (3)
Ni1—O32.0967 (13)C2—H20.9300
S1—C11.7524 (18)C3—H30.9300
S1—C61.8035 (19)C4—C51.373 (3)
O1—C71.253 (2)C4—H40.9300
O2—C71.249 (2)C5—H50.9300
O3—H3A0.8501C6—C71.528 (3)
O3—H3B0.8503C6—H6A0.9700
O4—H4A0.8501C6—H6B0.9700
O4—H4B0.8501
O4—Ni1—O4i179.999 (1)C2—C1—C5117.45 (16)
O4—Ni1—N192.68 (5)C2—C1—S1125.97 (14)
O4i—Ni1—N187.32 (5)C5—C1—S1116.57 (14)
O4—Ni1—N1i87.32 (5)C3—C2—C1119.08 (17)
O4i—Ni1—N1i92.68 (5)C3—C2—H2120.5
N1—Ni1—N1i180.0C1—C2—H2120.5
O4—Ni1—O3i86.23 (5)N1—C3—C2123.81 (17)
O4i—Ni1—O3i93.77 (5)N1—C3—H3118.1
N1—Ni1—O3i89.32 (5)C2—C3—H3118.1
N1i—Ni1—O3i90.69 (5)N1—C4—C5123.50 (17)
O4—Ni1—O393.77 (5)N1—C4—H4118.3
O4i—Ni1—O386.23 (5)C5—C4—H4118.3
N1—Ni1—O390.69 (5)C4—C5—C1119.45 (17)
N1i—Ni1—O389.31 (5)C4—C5—H5120.3
O3i—Ni1—O3180.0C1—C5—H5120.3
C1—S1—C6103.65 (9)C7—C6—S1110.25 (13)
Ni1—O3—H3A105.2C7—C6—H6A109.6
Ni1—O3—H3B134.1S1—C6—H6A109.6
H3A—O3—H3B117.1C7—C6—H6B109.6
Ni1—O4—H4A109.3S1—C6—H6B109.6
Ni1—O4—H4B114.5H6A—C6—H6B108.1
H4A—O4—H4B117.0O2—C7—O1126.41 (18)
C3—N1—C4116.70 (16)O2—C7—C6119.17 (17)
C3—N1—Ni1122.04 (12)O1—C7—C6114.39 (17)
C4—N1—Ni1121.22 (12)
O4—Ni1—N1—C3−125.81 (15)C4—N1—C3—C2−0.8 (3)
O4i—Ni1—N1—C354.19 (15)Ni1—N1—C3—C2176.86 (15)
O3i—Ni1—N1—C3−39.62 (15)C1—C2—C3—N1−0.1 (3)
O3—Ni1—N1—C3140.38 (15)C3—N1—C4—C50.8 (3)
O4—Ni1—N1—C451.79 (15)Ni1—N1—C4—C5−176.94 (14)
O4i—Ni1—N1—C4−128.21 (15)N1—C4—C5—C10.2 (3)
O3i—Ni1—N1—C4137.98 (15)C2—C1—C5—C4−1.2 (3)
O3—Ni1—N1—C4−42.02 (15)S1—C1—C5—C4178.42 (14)
C6—S1—C1—C20.69 (19)C1—S1—C6—C7178.07 (12)
C6—S1—C1—C5−178.92 (14)S1—C6—C7—O28.2 (2)
C5—C1—C2—C31.2 (3)S1—C6—C7—O1−170.33 (14)
S1—C1—C2—C3−178.44 (14)
D—H···AD—HH···AD···AD—H···A
O3—H3A···O2ii0.852.132.951 (2)161
O3—H3B···O1iii0.851.922.7265 (18)158
O4—H4A···O1iv0.851.832.6697 (18)168
O4—H4B···O2v0.852.012.855 (2)172
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O3—H3A⋯O2i0.852.132.951 (2)161
O3—H3B⋯O1ii0.851.922.7265 (18)158
O4—H4A⋯O1iii0.851.832.6697 (18)168
O4—H4B⋯O2iv0.852.012.855 (2)172

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .

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