| Literature DB >> 21835044 |
Nain-Feng Chu1, Fu-Hung Lin, Hsien-Chuan Chin, Ye-Jen Hong.
Abstract
BACKGROUND: To analyze the potential genetic associations between four polymorphisms of interleukin-6 receptor (IL-6R) gene and atherosclerotic lipid profiles among young adolescents in Taiwan.Entities:
Mesh:
Substances:
Year: 2011 PMID: 21835044 PMCID: PMC3180403 DOI: 10.1186/1476-511X-10-136
Source DB: PubMed Journal: Lipids Health Dis ISSN: 1476-511X Impact factor: 3.876
The genotypes and alleles frequencies of IL-6R gene polymorphisms among young adolescents in Taiwan
| Boys (n = 418) | Girls (n = 441) | χ2 test | |||
|---|---|---|---|---|---|
| n | % | n | % | p value | |
| rs4845617 G/A | |||||
| Genotype | |||||
| GG | 123 | 29.4 | 130 | 29.5 | 0.99 |
| GA | 199 | 47.6 | 211 | 47.8 | |
| AA | 96 | 23.0 | 100 | 22.7 | |
| Allele | |||||
| G | 445 | 53.2 | 471 | 53.4 | 0.94 |
| A | 391 | 46.8 | 411 | 46.6 | |
| rs4845623 A/G | |||||
| Genotype | |||||
| AA | 290 | 69.4 | 314 | 71.2 | 0.84 |
| AG | 116 | 27.7 | 115 | 26.1 | |
| GG | 12 | 2.9 | 12 | 2.7 | |
| Allele | |||||
| A | 696 | 83.2 | 743 | 84.2 | 0.58 |
| G | 140 | 16.8 | 139 | 15.8 | |
| rs8192284 A/C | |||||
| Genotype | |||||
| AA | 161 | 38.5 | 148 | 33.5 | 0.13 |
| AC | 202 | 48.3 | 216 | 49.0 | |
| CC | 55 | 13.2 | 77 | 17.5 | |
| Allele | |||||
| A | 524 | 62.7 | 512 | 58.0 | 0.05 |
| C | 312 | 37.3 | 370 | 42.0 | |
| rs2229238 C/T | |||||
| Genotype | |||||
| CC | 169 | 40.4 | 156 | 35.4 | 0.08 |
| CT | 192 | 45.9 | 202 | 45.8 | |
| TT | 57 | 13.7 | 83 | 18.8 | |
| Allele | |||||
| C | 530 | 63.4 | 514 | 58.3 | 0.03 |
| T | 306 | 36.6 | 368 | 41.7 | |
The lipid profiles among young adolescents with different IL-6R genotypes
| Wild-type | Heterozygotes | Minor-type | |||
|---|---|---|---|---|---|
| mean ± s.d. | mean ± s.d. | mean ± s.d. | pa | ||
| Boys (n = 418) | |||||
| rs4845617 G/A | GG (n = 123) | GA (n = 199) | AA (n = 96) | ||
| CHOL (mg/dl) | 158.7 ± 25.9 | 161.4 ± 28.4 | 156.7 ± 25.4 | 0.71 | |
| TG (mg/dl) | 70.1 ± 29.9 | 70.2 ± 34.4 | 63.5 ± 31.3 | 0.07 | |
| HDL-C (mg/dl) | 49.0 ± 11.0 | 50.7 ± 11.7 | 48.8 ± 12.0 | 0.95 | |
| LDL-C (mg/dl) | 80.5 ± 18.2 | 81.7 ± 19.6 | 80.6 ± 19.7 | 0.84 | |
| CHOL/HDL-C | 3.38 ± 0.84 | 3.32 ± 0.85 | 3.39 ± 1.01 | 0.85 | |
| LDL-C/HDL-C | 1.73 ± 0.57 | 1.70 ± 0.95 | 1.77 ± 0.69 | 0.89 | |
| TG/HDL-C | 1.57 ± 0.94 | 1.52 ± 1.02 | 1.47 ± 1.08 | 0.18 | |
| rs4845623 A/G | AA (n = 290) | AG (n = 116) | GG (n = 12) | ||
| CHOL (mg/dl) | 160.0 ± 27.2 | 158.8 ± 26.8 | 155.3 ± 26.0 | 0.51 | |
| TG (mg/dl) | 68.0 ± 32.0 | 71.1 ± 33.8 | 59.3 ± 30.1 | 0.87 | |
| HDL-C (mg/dl) | 49.7 ± 11.6 | 49.3 ± 11.4 | 56.7 ± 11.3 | 0.44 | |
| LDL-C (mg/dl) | 81.8 ± 19.2 | 80.4 ± 19.4 | 72.0 ± 16.5 | 0.12 | |
| CHOL/HDL-C | 3.36 ± 0.86 | 3.38 ± 0.96 | 2.80 ± 0.48 | 0.24 | |
| LDL-C/HDL-C | 1.74 ± 0.59 | 1.73 ± 0.65 | 1.31 ± 0.36 | 0.09 | |
| TG/HDL-C | 1.51 ± 0.98 | 1.61 ± 1.11 | 1.05 ± 0.46 | 0.84 | |
| rs8192284 A/C | AA (n = 161) | AC (n = 202) | CC (n = 55) | ||
| CHOL (mg/dl) | 158.8 ± 28.6 | 159.6 ± 26.0 | 161.3 ± 25.9 | 0.64 | |
| TG (mg/dl) | 69.9 ± 33.5 | 70.3 ± 33.8 | 58.7 ± 21.2 | 0.07 | |
| HDL-C (mg/dl) | 48.9 ± 10.6 | 50.2 ± 12.5 | 50.6 ± 10.7 | 0.22 | |
| LDL-C (mg/dl) | 80.4 ± 20.2 | 80.9 ± 18.7 | 83.9 ± 18.2 | 0.37 | |
| CHOL/HDL-C | 3.38 ± 0.89 | 3.35 ± 0.93 | 3.28 ± 0.71 | 0.46 | |
| LDL-C/HDL-C | 1.73 ± 0.60 | 1.73 ± 0.64 | 1.72 ± 0.51 | 0.93 | |
| TG/HDL-C | 1.57 ± 1.05 | 1.56 ± 1.05 | 1.24 ± 0.62 | 0.06 | |
| rs2229238 C/T | CC (n = 169) | CT (n = 192) | TT (n = 57) | ||
| CHOL (mg/dl) | 158.3 ± 28.9 | 160.0 ± 25.7 | 161.2 ± 25.6 | 0.51 | |
| TG (mg/dl) | 70.2 ± 33.3 | 70.0 ± 34.1 | 59.5 ± 21.5 | 0.07 | |
| HDL-C (mg/dl) | 49.3 ± 10.9 | 50.1 ± 12.3 | 50.1 ± 11.0 | 0.49 | |
| LDL-C (mg/dl) | 79.7 ± 20.7 | 81.5 ± 18.1 | 84.0 ± 18.4 | 0.17 | |
| CHOL/HDL-C | 3.35 ± 0.90 | 3.36 ± 0.91 | 3.33 ± 0.78 | 0.96 | |
| LDL-C/HDL-C | 1.71 ± 0.61 | 1.74 ± 0.62 | 1.75 ± 0.57 | 0.47 | |
| TG/HDL-C | 1.57 ± 1.04 | 1.56 ± 1.06 | 1.27 ± 0.63 | 0.09 | |
| Girls (n = 441) | |||||
| rs4845617 G/A | GG (n = 130) | GA (n = 211) | AA (n = 100) | ||
| CHOL (mg/dl) | 167.1 ± 26.0 | 168.7 ± 28.5 | 169.8 ± 28.2 | 0.47 | |
| TG (mg/dl) | 66.8 ± 27.0 | 69.6 ± 31.0 | 74.0 ± 32.1 | 0.11 | |
| HDL-C (mg/dl) | 51.7 ± 11.2 | 52.5 ± 12.2 | 49.9 ± 10.3 | 0.31 | |
| LDL-C (mg/dl) | 85.3 ± 18.3 | 86.7 ± 21.0 | 87.4 ± 20.6 | 0.44 | |
| CHOL/HDL-C | 3.33 ± 0.70 | 3.36 ± 0.89 | 3.52 ± 0.80 | 0.16 | |
| LDL-C/HDL-C | 1.72 ± 0.50 | 1.74 ± 0.60 | 1.82 ± 0.55 | 0.26 | |
| TG/HDL-C | 1.37 ± 0.72 | 1.47 ± 1.01 | 1.59 ± 0.96 | 0.09 | |
| rs4845623 A/G | AA (n = 314) | AG (n = 115) | GG (n = 12) | ||
| CHOL (mg/dl) | 167.3 ± 27.9 | 170.5 ± 27.3 | 178.4 ± 23.7 | 0.17 | |
| TG (mg/dl) | 71.1 ± 31.7 | 67.5 ± 26.8 | 58.4 ± 15.3 | 0.24 | |
| HDL-C (mg/dl) | 50.7 ± 11.0 | 54.2 ± 12.8 | 51.7 ± 10.0 | 0.04 | |
| LDL-C (mg/dl) | 86.0 ± 20.7 | 86.8 ± 18.9 | 93.1 ± 14.2 | 0.44 | |
| CHOL/HDL-C | 3.43 ± 0.85 | 3.27 ± 0.73 | 3.54 ± 0.63 | 0.37 | |
| LDL-C/HDL-C | 1.78 ± 0.58 | 1.68 ± 0.51 | 1.87 ± 0.46 | 0.52 | |
| TG/HDL-C | 1.53 ± 1.01 | 1.34 ± 0.66 | 1.17 ± 0.40 | 0.07 | |
| rs8192284 A/C | AA (n = 148) | AC (n = 216) | CC (n = 77) | ||
| CHOL (mg/dl) | 166.8 ± 26.9 | 168.6 ± 27.6 | 171.4 ± 29.3 | 0.21 | |
| TG (mg/dl) | 66.6 ± 24.8 | 70.5 ± 30.3 | 73.9 ± 38.0 | 0.24 | |
| HDL-C (mg/dl) | 52.8 ± 11.7 | 51.6 ± 11.8 | 49.8 ± 10.2 | 0.09 | |
| LDL-C (mg/dl) | 84.7 ± 18.7 | 86.7 ± 20.9 | 89.2 ± 20.3 | 0.11 | |
| CHOL/HDL-C | 3.26 ± 0.66 | 3.42 ± 0.90 | 3.56 ± 0.84 | 0.01 | |
| LDL-C/HDL-C | 1.67 ± 0.48 | 1.77 ± 0.61 | 1.86 ± 0.54 | 0.02 | |
| TG/HDL-C | 1.34 ± 0.61 | 1.51 ± 0.99 | 1.62 ± 1.18 | 0.10 | |
| rs2229238 C/T | CC (n = 156) | CT (n = 202) | TT (n = 83) | ||
| CHOL (mg/dl) | 166.7 ± 27.2 | 168.6 ± 27.0 | 171.5 ± 30.2 | 0.17 | |
| TG (mg/dl) | 66.3 ± 24.6 | 70.9 ± 30.9 | 73.6 ± 36.9 | 0.16 | |
| HDL-C (mg/dl) | 52.9 ± 11.9 | 51.5 ± 11.7 | 49.8 ± 10.4 | 0.07 | |
| LDL-C (mg/dl) | 84.5 ± 18.9 | 86.7 ± 20.8 | 89.2 ± 20.5 | 0.08 | |
| CHOL/HDL-C | 3.25 ± 0.66 | 3.43 ± 0.90 | 3.56 ± 0.84 | 0.008 | |
| LDL-C/HDL-C | 1.66 ± 0.48 | 1.78 ± 0.61 | 1.86 ± 0.54 | 0.01 | |
| TG/HDL-C | 1.33 ± 0.61 | 1.52 ± 1.01 | 1.61 ± 1.15 | 0.06 | |
Abbreviation: CHOL, Cholesterol; TG, Triglycerides; HDL-C, High density lipoprotein-cholesterol; LDL-C, Low density lipoprotein-cholesterol.
a Using GLM test after adjusting for age, cigarette smoking, alcohol drinking, and puberty status.
Logistic regression analyses of different IL-6R genotypes on lipid status among young adolescents a
| Model type | rs4845617 G/A | rs4845623 A/G | rs8192284 A/C | rs2229238 C/T | |||||
|---|---|---|---|---|---|---|---|---|---|
| OR | 95%CI | OR | 95%CI | OR | 95%CI | OR | 95%CI | ||
| Boys | |||||||||
| High CHOL | additive | 0.91 | 0.55-1.50 | 1.10 | 0.58-2.06 | 0.90 | 0.53-1.52 | 0.81 | 0.48-1.36 |
| dominant | 0.74 | 0.29-1.86 | 0.77 | 0.09-6.39 | 1.36 | 0.53-3.50 | 1.32 | 0.51-3.38 | |
| recessive | 1.01 | 0.46-2.19 | 1.18 | 0.56-2.47 | 0.70 | 0.35-1.42 | 0.58 | 0.29-1.17 | |
| High TG | additive | 0.92 | 0.61-1.40 | 1.45 | 0.85-2.46 | 0.85 | 0.54-1.34 | 0.81 | 0.51-1.27 |
| dominant | 0.95 | 0.46-1.97 | 1.56 | 0.32-7.50 | 0.39 | 0.12-1.32 | 0.38 | 0.11-1.26 | |
| recessive | 0.86 | 0.45-1.63 | 1.55 | 0.83-2.91 | 1.04 | 0.56-1.94 | 0.95 | 0.52-1.75 | |
| High HDL-C | additive | 1.02 | 0.70-1.49 | 0.98 | 0.58-1.64 | 0.78 | 0.51-1.18 | 0.84 | 0.56-1.27 |
| dominant | 1.35 | 0.72-2.52 | 0.51 | 0.06-4.04 | 0.68 | 0.28-1.68 | 0.79 | 0.34-1.85 | |
| recessive | 0.81 | 0.45-1.45 | 1.04 | 0.58-1.89 | 0.74 | 0.43-1.28 | 0.81 | 0.46-1.40 | |
| High LDL-C | additive | 0.78 | 0.49-1.26 | 0.81 | 0.42-1.57 | 0.83 | 0.50-1.39 | 0.81 | 0.49-1.34 |
| dominant | 0.94 | 0.41-2.15 | - | - | 1.22 | 0.48-3.09 | 1.18 | 0.46-2.97 | |
| recessive | 0.60 | 0.30-1.21 | 0.90 | 0.43-1.90 | 0.65 | 0.33-1.27 | 0.62 | 0.32-1.22 | |
| High CHOL/HDL-C | additive | 1.24 | 0.79-1.93 | 0.74 | 0.38-1.43 | 0.70 | 0.43-1.16 | 0.78 | 0.48-1.27 |
| dominant | 1.39 | 0.67-2.89 | - | - | 0.30 | 0.07-1.26 | 0.45 | 0.13-1.51 | |
| recessive | 1.28 | 0.61-2.66 | 0.81 | 0.39-1.67 | 0.79 | 0.41-1.51 | 0.86 | 0.45-1.64 | |
| Girls | |||||||||
| High CHOL | additive | 1.23 | 0.79-1.93 | 0.96 | 0.51-1.79 | 1.13 | 0.71-1.80 | 1.20 | 0.77-1.88 |
| dominant | 1.15 | 0.55-2.43 | 1.78 | 0.36-8.79 | 1.51 | 0.70-3.27 | 1.60 | 0.76-3.38 | |
| recessive | 1.55 | 0.71-3.36 | 0.85 | 0.41-1.78 | 0.97 | 0.49-1.92 | 1.07 | 0.54-2.12 | |
| High TG | additive | 1.59 | 1.06-2.37 | 0.57 | 0.30-1.09 | 1.58 | 1.05-2.37 | 1.55 | 1.04-2.29 |
| dominant | 1.77 | 0.95-3.28 | - | - | 1.53 | 0.77-3.02 | 1.54 | 0.79-2.99 | |
| recessive | 2.00 | 0.97-4.11 | 0.59 | 0.29-1.19 | 2.21 | 1.10-4.44 | 2.14 | 1.09-4.20 | |
| High HDL-C | additive | 1.24 | 0.83-1.86 | 0.76 | 0.41-1.41 | 1.57 | 1.03-2.39 | 1.68 | 1.12-2.52 |
| dominant | 1.24 | 0.64-2.41 | 0.73 | 0.09-5.94 | 1.67 | 0.84-3.32 | 1.90 | 0.98-3.67 | |
| recessive | 1.46 | 0.74-2.92 | 0.74 | 0.37-1.46 | 1.98 | 0.99-4.00 | 2.16 | 1.07-4.35 | |
| High LDL-C | additive | 1.08 | 0.70-1.65 | 1.01 | 0.56-1.82 | 1.10 | 0.71-1.71 | 1.22 | 0.80-1.86 |
| dominant | 0.87 | 0.41-1.84 | 0.75 | 0.09-6.08 | 0.77 | 0.33-1.82 | 0.99 | 0.45-2.16 | |
| recessive | 1.38 | 0.68-2.83 | 1.05 | 0.53-2.05 | 1.48 | 0.74-2.96 | 1.63 | 0.81-3.25 | |
| High CHOL/HDL-C | additive | 1.27 | 0.83-1.94 | 0.70 | 0.37-1.36 | 1.68 | 1.08-2.61 | 1.82 | 1.18-2.79 |
| dominant | 1.38 | 0.69-2.75 | 1.75 | 0.36-8.56 | 1.35 | 0.64-2.86 | 1.61 | 0.79-3.27 | |
| recessive | 1.38 | 0.68-2.82 | 0.57 | 0.27-1.22 | 3.17 | 1.37-7.30 | 3.47 | 1.51-8.00 | |
Abbreviation: CHOL, Cholesterol; TG, Triglycerides; HDL-C, High density lipoprotein-cholesterol; LDL-C, Low density lipoprotein-cholesterol.
additive model: major-homozygotes v.s. heterozygotes v.s. minor-homozygotes, reference group: major-homozygotes.
dominant model: major-homozygotes/heterozygotes v.s. minor-homozygotes, reference group: major-homozygotes/heterozygotes.
recessive model: major-homozygotes v.s. heterozygotes/minor-homozygotes; reference group: major-homozygotes.
a All abnormal variables defined as age- and gender-specific 90th percentile cut-off point of study variables and OR was adjusted for age, cigarette smoking, alcohol drinking, and puberty status.
Haplotype frequencies of IL-6R gene and associated with lipid status among young adolescents a
| Haplotypeb | Abnormal | Normal | OR | 95%CI | p | Global p | |
|---|---|---|---|---|---|---|---|
| HF | HF | ||||||
| High TG | H1 | 0.35 | 0.33 | 1.00 | - | - | 0.75 |
| H2 | 0.08 | 0.10 | 0.49 | 0.08-2.84 | 0.43 | ||
| H3 | 0.13 | 0.10 | 1.27 | 0.27-5.91 | 0.76 | ||
| H4 | 0.13 | 0.14 | 0.68 | 0.15-2.98 | 0.61 | ||
| H5 | 0.24 | 0.27 | 0.61 | 0.20-1.90 | 0.39 | ||
| Low HDL-C | H1 | 0.39 | 0.32 | 1.00 | - | - | 0.29 |
| H2 | 0.07 | 0.10 | 0.31 | 0.06-1.60 | 0.16 | ||
| H3 | 0.07 | 0.11 | 0.23 | 0.04-1.18 | 0.08 | ||
| H4 | 0.13 | 0.14 | 0.47 | 0.13-1.78 | 0.27 | ||
| H5 | 0.24 | 0.27 | 0.51 | 0.18-1.38 | 0.18 | ||
| Abnormal lipidc | H1 | 0.36 | 0.32 | 1.00 | - | - | 0.84 |
| H2 | 0.09 | 0.10 | 0.64 | 0.17-2.41 | 0.51 | ||
| H3 | 0.09 | 0.11 | 0.55 | 0.14-2.10 | 0.38 | ||
| H4 | 0.14 | 0.14 | 0.68 | 0.21-2.18 | 0.51 | ||
| H5 | 0.24 | 0.27 | 0.64 | 0.26-1.57 | 0.33 | ||
| High CHOL/HDL-C | H1 | 0.37 | 0.33 | 1.00 | - | - | 0.19 |
| H2 | 0.06 | 0.10 | 0.27 | 0.03-2.29 | 0.23 | ||
| H3 | 0.05 | 0.11 | 0.16 | 0.02-1.45 | 0.10 | ||
| H4 | 0.19 | 0.14 | 1.26 | 0.32-5.02 | 0.74 | ||
| H5 | 0.25 | 0.27 | 0.63 | 0.19-2.05 | 0.44 | ||
| High TG | H1 | 0.21 | 0.30 | 1.00 | - | - | 0.04 |
| H2 | 0.16 | 0.13 | 2.75 | 0.62-12.26 | 0.19 | ||
| H3 | 0.06 | 0.12 | 0.47 | 0.06-3.64 | 0.47 | ||
| H4 | 0.17 | 0.13 | 3.22 | 0.68-15.36 | 0.14 | ||
| H5 | 0.36 | 0.28 | 3.08 | 1.07-8.87 | 0.04 | ||
| Low HDL-C | H1 | 0.22 | 0.30 | 1.00 | - | - | 0.13 |
| H2 | 0.17 | 0.12 | 3.56 | 0.81-15.53 | 0.09 | ||
| H3 | 0.09 | 0.11 | 1.35 | 0.23-8.04 | 0.74 | ||
| H4 | 0.12 | 0.14 | 1.45 | 0.24-8.81 | 0.69 | ||
| H5 | 0.37 | 0.28 | 3.30 | 1.11-9.85 | 0.03 | ||
| Abnormal lipid | H1 | 0.22 | 0.31 | 1.00 | - | - | 0.03 |
| H2 | 0.16 | 0.12 | 2.93 | 0.85-10.03 | 0.09 | ||
| H3 | 0.08 | 0.12 | 0.91 | 0.20-4.07 | 0.90 | ||
| H4 | 0.15 | 0.13 | 2.57 | 0.67-9.85 | 0.17 | ||
| H5 | 0.36 | 0.27 | 3.22 | 1.34-7.76 | 0.009 | ||
| High CHOL/HDL-C | H1 | 0.21 | 0.30 | 1.00 | - | - | 0.08 |
| H2 | 0.17 | 0.12 | 4.66 | 0.97-22.38 | 0.05 | ||
| H3 | 0.10 | 0.11 | 2.05 | 0.32-13.28 | 0.45 | ||
| H4 | 0.11 | 0.14 | 1.97 | 0.29-13.46 | 0.49 | ||
| H5 | 0.38 | 0.28 | 4.40 | 1.35-14.32 | 0.01 |
Abbreviation: CHOL, Cholesterol; TG, Triglycerides; HDL-C, High density lipoprotein-cholesterol; LDL-C, Low density lipoprotein-cholesterol; HF, Haplotype frequency
a All abnormal variables defined as age- and gender-specific 90th percentile cut-off point of study variables
b Five common haplotype frequencies of IL-6R rs4845617 G/A, rs4845623 A/G, and rs2229238 C/T (H1: GAC, H2: GAT, H3: GGC, H5: AAC, H6: AAT) at least 5% and H1 as reference group.
c Abnormal lipid includes high TG or low HDL-C
Figure 1Haploview linkage disequilibrium (D') display the haplotype structures of IL-6R genes. Darker shading of cells indicates stronger LD between single nucleotide polymorphisms.