Literature DB >> 21832579

Fully automated single-molecule force spectroscopy for screening applications.

Jens Struckmeier1, Reiner Wahl, Mirko Leuschner, Joao Nunes, Harald Janovjak, Ulrich Geisler, Gerd Hofmann, Torsten Jähnke, Daniel J Müller.   

Abstract

With the introduction of single-molecule force spectroscopy (SMFS) it has become possible to directly access the interactions of various molecular systems. A bottleneck in conventional SMFS is collecting the large amount of data required for statistically meaningful analysis. Currently, atomic force microscopy (AFM)-based SMFS requires the user to tediously 'fish' for single molecules. In addition, most experimental and environmental conditions must be manually adjusted. Here, we developed a fully automated single-molecule force spectroscope. The instrument is able to perform SMFS while monitoring and regulating experimental conditions such as buffer composition and temperature. Cantilever alignment and calibration can also be automatically performed during experiments. This, combined with in-line data analysis, enables the instrument, once set up, to perform complete SMFS experiments autonomously.

Year:  2008        PMID: 21832579     DOI: 10.1088/0957-4484/19/38/384020

Source DB:  PubMed          Journal:  Nanotechnology        ISSN: 0957-4484            Impact factor:   3.874


  13 in total

1.  Conservation of molecular interactions stabilizing bovine and mouse rhodopsin.

Authors:  Shiho Kawamura; Alejandro T Colozo; Daniel J Müller; Paul S-H Park
Journal:  Biochemistry       Date:  2010-11-11       Impact factor: 3.162

2.  Improving single molecule force spectroscopy through automated real-time data collection and quantification of experimental conditions.

Authors:  Zackary N Scholl; Piotr E Marszalek
Journal:  Ultramicroscopy       Date:  2013-08-07       Impact factor: 2.689

3.  Five challenges to bringing single-molecule force spectroscopy into living cells.

Authors:  Yves F Dufrêne; Evan Evans; Andreas Engel; Jonne Helenius; Hermann E Gaub; Daniel J Müller
Journal:  Nat Methods       Date:  2011-02       Impact factor: 28.547

4.  Toward high-throughput biomechanical phenotyping of single molecules.

Authors:  David Alsteens; Savaş Tay; Daniel J Müller
Journal:  Nat Methods       Date:  2015-01       Impact factor: 28.547

5.  Reference-free alignment and sorting of single-molecule force spectroscopy data.

Authors:  Patrick D Bosshart; Patrick L T M Frederix; Andreas Engel
Journal:  Biophys J       Date:  2012-05-02       Impact factor: 4.033

6.  Optimization of Protein-Protein Interaction Measurements for Drug Discovery Using AFM Force Spectroscopy.

Authors:  Yongliang Yang; Bixi Zeng; Zhiyong Sun; Amir Monemian Esfahani; Jing Hou; Nian-Dong Jiao; Lianqing Liu; Liangliang Chen; Marc D Basson; Lixin Dong; Ruiguo Yang; Ning Xi
Journal:  IEEE Trans Nanotechnol       Date:  2019-05-14       Impact factor: 2.570

7.  Dynamic single-molecule force spectroscopy of rhodopsin in native membranes.

Authors:  Paul S-H Park; Daniel J Müller
Journal:  Methods Mol Biol       Date:  2015

8.  Cholesterol increases kinetic, energetic, and mechanical stability of the human β2-adrenergic receptor.

Authors:  Michael Zocher; Cheng Zhang; Søren G F Rasmussen; Brian K Kobilka; Daniel J Müller
Journal:  Proc Natl Acad Sci U S A       Date:  2012-11-14       Impact factor: 11.205

Review 9.  Atomic force microscopy: a multifaceted tool to study membrane proteins and their interactions with ligands.

Authors:  Allison M Whited; Paul S-H Park
Journal:  Biochim Biophys Acta       Date:  2013-04-16

10.  Peptide transporter DtpA has two alternate conformations, one of which is promoted by inhibitor binding.

Authors:  Christian A Bippes; Lin Ge; Marcel Meury; Daniel Harder; Zöhre Ucurum; Hannelore Daniel; Dimitrios Fotiadis; Daniel J Müller
Journal:  Proc Natl Acad Sci U S A       Date:  2013-09-30       Impact factor: 11.205

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