Literature DB >> 21830199

Application of ring-closing metathesis to Grb2 SH3 domain-binding peptides.

Fa Liu1, Alessio Giubellino, Philip C Simister, Wenjian Qian, Michael C Giano, Stephan M Feller, Donald P Bottaro, Terrence R Burke.   

Abstract

Molecular processes depending on protein–protein interactions can use consensus recognition sequences that possess defined secondary structures. Left-handed polyproline II (PPII) helices are a class of secondary structure commonly involved with cellular signal transduction. However, unlike -helices, for which a substantial body of work exists regarding applications of ring-closing metathesis (RCM), there are few reports on the stabilization of PPII helices by RCM methodologies. The current study examined the effects of RCM macrocyclization on left-handed PPII helices involved with the SH3 domain-mediated binding of Sos1Grb2. Starting with the Sos1-derived peptide “Ac-V1-P2-P3-P4-V5-P6-P7-R8-R9-R10-amide,” RCM macrocyclizations were conducted using alkenyl chains of varying lengths originating from the pyrrolidine rings of the Pro4 and Pro7 residues. The resulting macrocyclic peptides showed increased helicity as indicated by circular dichroism and enhanced abilities to block Grb2Sos1 interactions in cell lysate pull-down assays. The synthetic approach may be useful in RCM macrocyclizations, where maintenance of proline integrity at both ring junctures is desired.

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Year:  2011        PMID: 21830199      PMCID: PMC3402909          DOI: 10.1002/bip.21692

Source DB:  PubMed          Journal:  Biopolymers        ISSN: 0006-3525            Impact factor:   2.505


  37 in total

1.  Solution structure of Grb2 reveals extensive flexibility necessary for target recognition.

Authors:  S Yuzawa; M Yokochi; H Hatanaka; K Ogura; M Kataoka; K Miura ; V Mandiyan; J Schlessinger; F Inagaki
Journal:  J Mol Biol       Date:  2001-02-23       Impact factor: 5.469

2.  Solution structure of the Grb2 N-terminal SH3 domain complexed with a ten-residue peptide derived from SOS: direct refinement against NOEs, J-couplings and 1H and 13C chemical shifts.

Authors:  M Wittekind; C Mapelli; V Lee; V Goldfarb; M S Friedrichs; C A Meyers; L Mueller
Journal:  J Mol Biol       Date:  1997-04-11       Impact factor: 5.469

3.  Enhanced metabolic stability and protein-binding properties of artificial alpha helices derived from a hydrogen-bond surrogate: application to Bcl-xL.

Authors:  Deyun Wang; Wei Liao; Paramjit S Arora
Journal:  Angew Chem Int Ed Engl       Date:  2005-10-14       Impact factor: 15.336

Review 4.  Potential disease targets for drugs that disrupt protein-- protein interactions of Grb2 and Crk family adaptors.

Authors:  Stephan M Feller; Marc Lewitzky
Journal:  Curr Pharm Des       Date:  2006       Impact factor: 3.116

5.  Reactivation of the p53 tumor suppressor pathway by a stapled p53 peptide.

Authors:  Federico Bernal; Andrew F Tyler; Stanley J Korsmeyer; Loren D Walensky; Gregory L Verdine
Journal:  J Am Chem Soc       Date:  2007-02-07       Impact factor: 15.419

6.  Grb2 SH3 binding to peptides from Sos: evaluation of a general model for SH3-ligand interactions.

Authors:  J A Simon; S L Schreiber
Journal:  Chem Biol       Date:  1995-01

7.  The C-terminal SH3 domain of the adapter protein Grb2 binds with high affinity to sequences in Gab1 and SLP-76 which lack the SH3-typical P-x-x-P core motif.

Authors:  M Lewitzky; C Kardinal; N H Gehring; E K Schmidt; B Konkol; M Eulitz; W Birchmeier; U Schaeper; S M Feller
Journal:  Oncogene       Date:  2001-03-01       Impact factor: 9.867

8.  4-Fluoroproline derivative peptides: effect on PPII conformation and SH3 affinity.

Authors:  Paolo Ruzza; Giuliano Siligardi; Arianna Donella-Deana; Andrea Calderan; Rohanah Hussain; Chiara Rubini; Luca Cesaro; Alessio Osler; Andrea Guiotto; Lorenzo A Pinna; Gianfranco Borin
Journal:  J Pept Sci       Date:  2006-07       Impact factor: 1.905

9.  Strategies for the solid-phase diversification of poly-L-proline-type II peptide mimic scaffolds and peptide scaffolds through guanidinylation.

Authors:  Stevenson Flemer; Alexander Wurthmann; Ahmed Mamai; José S Madalengoitia
Journal:  J Org Chem       Date:  2008-08-28       Impact factor: 4.354

10.  All-atom model for stabilization of alpha-helical structure in peptides by hydrocarbon staples.

Authors:  Peter S Kutchukian; Jae Shick Yang; Gregory L Verdine; Eugene I Shakhnovich
Journal:  J Am Chem Soc       Date:  2009-04-08       Impact factor: 15.419

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  3 in total

Review 1.  Targeting kinase signaling pathways with constrained peptide scaffolds.

Authors:  Laura E Hanold; Melody D Fulton; Eileen J Kennedy
Journal:  Pharmacol Ther       Date:  2017-02-07       Impact factor: 12.310

2.  Neighbor-directed histidine N (τ)-alkylation: A route to imidazolium-containing phosphopeptide macrocycles.

Authors:  Wen-Jian Qian; Jung-Eun Park; Robert Grant; Christopher C Lai; James A Kelley; Michael B Yaffe; Kyung S Lee; Terrence R Burke
Journal:  Biopolymers       Date:  2015-11       Impact factor: 2.505

Review 3.  Recent Advances in Macrocyclic Drugs and Microwave-Assisted and/or Solid-Supported Synthesis of Macrocycles.

Authors:  Dianqing Sun
Journal:  Molecules       Date:  2022-02-02       Impact factor: 4.411

  3 in total

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