Literature DB >> 21821471

Comparison of real-time reverse-transcription loop-mediated isothermal amplification and real-time reverse-transcription polymerase chain reaction for detection of noroviruses in municipal wastewater.

Yoshihiro Suzuki1, Shogo Narimatsu, Takashi Furukawa, Akira Iwakiri, Miho Miura, Shogo Yamamoto, Hiroyuki Katayama.   

Abstract

The monitoring of NVs in municipal wastewater by both real-time RT-LAMP and real-time RT-PCR, and the comparison of these two methods with respect to NV detection were carried out. The change in NVs detected by real-time RT-LAMP agreed well with that detected by real-time RT-PCR. In contrast, the correlation between the copy number determined by real-time RT-PCR and the threshold time (Tt) determined by real-time RT-LAMP obtained during monitoring was not significant (0.1<p) for both NV-GI and NV-GII.
Copyright © 2011 The Society for Biotechnology, Japan. Published by Elsevier B.V. All rights reserved.

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Year:  2011        PMID: 21821471     DOI: 10.1016/j.jbiosc.2011.06.012

Source DB:  PubMed          Journal:  J Biosci Bioeng        ISSN: 1347-4421            Impact factor:   2.894


  3 in total

1.  Development and evaluation of reverse transcription loop-mediated isothermal amplification assay for the detection of the fathead minnow nidovirus.

Authors:  Qingli Zhang; Isaac Standish; Andrew D Winters; Corey Puzach; Rachel Ulferts; John Ziebuhr; Mohamed Faisal
Journal:  J Virol Methods       Date:  2014-03-01       Impact factor: 2.014

2.  Reverse transcription loop-mediated isothermal amplification for rapid and quantitative assay of covert mortality nodavirus in shrimp.

Authors:  Qingli Zhang; Shuang Liu; Haolin Yang; Luoluo Zhu; Xiaoyuan Wan; Xiaoping Li; Jie Huang
Journal:  J Invertebr Pathol       Date:  2015-09-09       Impact factor: 2.841

3.  Development of a loop-mediated isothermal amplification assay for the detection and quantification of epizootic epitheliotropic disease virus (salmonid herpesvirus-3).

Authors:  Qingli Zhang; Megan Shavalier; Isaac Standish; Gavin W Glenney; Thomas P Loch; Mohamed Faisal
Journal:  J Virol Methods       Date:  2018-11-13       Impact factor: 2.014

  3 in total

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