Literature DB >> 21820065

Registration of longitudinal brain image sequences with implicit template and spatial-temporal heuristics.

Guorong Wu1, Qian Wang, Dinggang Shen.   

Abstract

Accurate measurement of longitudinal changes of brain structures and functions is very important but challenging in many clinical studies. Also, across-subject comparison of longitudinal changes is critical in identifying disease-related changes. In this paper, we propose a novel method to meet these two requirements by simultaneously registering sets of longitudinal image sequences of different subjects to the common space, without assuming any explicit template. Specifically, our goal is to 1) consistently measure the longitudinal changes from a longitudinal image sequence of each subject, and 2) jointly align all image sequences of different subjects to a hidden common space. To achieve these two goals, we first introduce a set of temporal fiber bundles to explore the spatial-temporal behavior of anatomical changes in each longitudinal image sequence. Then, a probabilistic model is built upon the temporal fibers to characterize both spatial smoothness and temporal continuity. Finally, the transformation fields that connect each time-point image of each subject to the common space are simultaneously estimated by the expectation maximization (EM) approach, via the maximum a posterior (MAP) estimation of the probabilistic models. Promising results have been obtained in quantitative measurement of longitudinal brain changes, i.e., hippocampus volume changes, showing better performance than those obtained by either the pairwise or the groupwise only registration methods.
Copyright © 2011 Elsevier Inc. All rights reserved.

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Year:  2011        PMID: 21820065      PMCID: PMC3195864          DOI: 10.1016/j.neuroimage.2011.07.026

Source DB:  PubMed          Journal:  Neuroimage        ISSN: 1053-8119            Impact factor:   6.556


  43 in total

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Authors:  Susumu Mori; Peter C M van Zijl
Journal:  NMR Biomed       Date:  2002 Nov-Dec       Impact factor: 4.044

2.  Measuring temporal morphological changes robustly in brain MR images via 4-dimensional template warping.

Authors:  Dinggang Shen; Christos Davatzikos
Journal:  Neuroimage       Date:  2004-04       Impact factor: 6.556

3.  Nonrigid registration of dynamic medical imaging data using nD + t B-splines and a groupwise optimization approach.

Authors:  C T Metz; S Klein; M Schaap; T van Walsum; W J Niessen
Journal:  Med Image Anal       Date:  2010-10-28       Impact factor: 8.545

Review 4.  The current status of mild cognitive impairment--what do we tell our patients?

Authors:  Ronald C Petersen
Journal:  Nat Clin Pract Neurol       Date:  2007-02

5.  Non-rigid image registration with SalphaS filters.

Authors:  Shu Liao; Albert C S Chung
Journal:  Med Image Comput Comput Assist Interv       Date:  2008

6.  Spatiotemporal atlas estimation for developmental delay detection in longitudinal datasets.

Authors:  Stanley Durrleman; Xavier Pennec; Alain Trouvé; Guido Gerig; Nicholas Ayache
Journal:  Med Image Comput Comput Assist Interv       Date:  2009

7.  Bias in estimation of hippocampal atrophy using deformation-based morphometry arises from asymmetric global normalization: an illustration in ADNI 3 T MRI data.

Authors:  Paul A Yushkevich; Brian B Avants; Sandhitsu R Das; John Pluta; Murat Altinay; Caryne Craige
Journal:  Neuroimage       Date:  2009-12-31       Impact factor: 6.556

8.  Groupwise registration based on hierarchical image clustering and atlas synthesis.

Authors:  Qian Wang; Liya Chen; Pew-Thian Yap; Guorong Wu; Dinggang Shen
Journal:  Hum Brain Mapp       Date:  2010-08       Impact factor: 5.038

9.  Fully automatic hippocampus segmentation and classification in Alzheimer's disease and mild cognitive impairment applied on data from ADNI.

Authors:  Marie Chupin; Emilie Gérardin; Rémi Cuingnet; Claire Boutet; Louis Lemieux; Stéphane Lehéricy; Habib Benali; Line Garnero; Olivier Colliot
Journal:  Hippocampus       Date:  2009-06       Impact factor: 3.899

10.  Longitudinal progression of Alzheimer's-like patterns of atrophy in normal older adults: the SPARE-AD index.

Authors:  Christos Davatzikos; Feng Xu; Yang An; Yong Fan; Susan M Resnick
Journal:  Brain       Date:  2009-05-04       Impact factor: 13.501

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  16 in total

1.  Estimating the 4D respiratory lung motion by spatiotemporal registration and super-resolution image reconstruction.

Authors:  Guorong Wu; Qian Wang; Jun Lian; Dinggang Shen
Journal:  Med Phys       Date:  2013-03       Impact factor: 4.071

2.  iBEAT: A toolbox for infant brain magnetic resonance image processing.

Authors:  Yakang Dai; Feng Shi; Li Wang; Guorong Wu; Dinggang Shen
Journal:  Neuroinformatics       Date:  2013-04

3.  Quantitative analysis of hypertrophic myocardium using diffusion tensor magnetic resonance imaging.

Authors:  Nicholas Tran; Archontis Giannakidis; Grant T Gullberg; Youngho Seo
Journal:  J Med Imaging (Bellingham)       Date:  2016-11-03

4.  Hierarchical unbiased graph shrinkage (HUGS): a novel groupwise registration for large data set.

Authors:  Shihui Ying; Guorong Wu; Qian Wang; Dinggang Shen
Journal:  Neuroimage       Date:  2013-09-19       Impact factor: 6.556

5.  First-year development of modules and hubs in infant brain functional networks.

Authors:  Xuyun Wen; Han Zhang; Gang Li; Mingxia Liu; Weiyan Yin; Weili Lin; Jun Zhang; Dinggang Shen
Journal:  Neuroimage       Date:  2018-10-10       Impact factor: 6.556

6.  Dual-Layer Groupwise Registration for Consistent Labeling of Longitudinal Brain Images.

Authors:  Minjeong Kim; Guorong Wu; Isrem Rekik; Dinggang Shen
Journal:  Mach Learn Med Imaging       Date:  2016-10-01

7.  Scalable Joint Segmentation and Registration Framework for Infant Brain Images.

Authors:  Pei Dong; Li Wang; Weili Lin; Dinggang Shen; Guorong Wu
Journal:  Neurocomputing       Date:  2016-11-16       Impact factor: 5.719

8.  Consistent Multi-Atlas Hippocampus Segmentation for Longitudinal MR Brain Images with Temporal Sparse Representation.

Authors:  Lin Wang; Yanrong Guo; Xiaohuan Cao; Guorong Wu; Dinggang Shen
Journal:  Patch Based Tech Med Imaging (2016)       Date:  2016-09-22

9.  Longitudinal image registration with temporally-dependent image similarity measure.

Authors:  Istvan Csapo; Brad Davis; Yundi Shi; Mar Sanchez; Martin Styner; Marc Niethammer
Journal:  IEEE Trans Med Imaging       Date:  2013-07-03       Impact factor: 10.048

10.  Development of Dynamic Functional Architecture during Early Infancy.

Authors:  Xuyun Wen; Rifeng Wang; Weiyan Yin; Weili Lin; Han Zhang; Dinggang Shen
Journal:  Cereb Cortex       Date:  2020-10-01       Impact factor: 5.357

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