Literature DB >> 21812660

Molecular interaction studies using microscale thermophoresis.

Moran Jerabek-Willemsen1, Chistoph J Wienken, Dieter Braun, Philipp Baaske, Stefan Duhr.   

Abstract

Abstract The use of infrared laser sources for creation of localized temperature fields has opened new possibilities for basic research and drug discovery. A recently developed technology, Microscale Thermophoresis (MST), uses this temperature field to perform biomolecular interaction studies. Thermophoresis, the motion of molecules in temperature fields, is very sensitive to changes in size, charge, and solvation shell of a molecule and thus suited for bioanalytics. This review focuses on the theoretical background of MST and gives a detailed overview on various applications to demonstrate the broad applicability. Experiments range from the quantification of the affinity of low-molecular-weight binders using fluorescently labeled proteins, to interactions between macromolecules and multi-component complexes like receptor containing liposomes. Information regarding experiment and experimental setup is based on the Monolith NT.115 instrument (NanoTemper Technologies GmbH).

Entities:  

Mesh:

Substances:

Year:  2011        PMID: 21812660      PMCID: PMC3148787          DOI: 10.1089/adt.2011.0380

Source DB:  PubMed          Journal:  Assay Drug Dev Technol        ISSN: 1540-658X            Impact factor:   1.738


  27 in total

1.  Spectroscopic study and evaluation of red-absorbing fluorescent dyes.

Authors:  Volker Buschmann; Kenneth D Weston; Markus Sauer
Journal:  Bioconjug Chem       Date:  2003 Jan-Feb       Impact factor: 4.774

2.  Thermophoresis of DNA determined by microfluidic fluorescence.

Authors:  S Duhr; S Arduini; D Braun
Journal:  Eur Phys J E Soft Matter       Date:  2004-11-17       Impact factor: 1.890

3.  Thermodiffusion of charged colloids: single-particle diffusion.

Authors:  Jan K G Dhont; S Wiegand; S Duhr; D Braun
Journal:  Langmuir       Date:  2007-02-13       Impact factor: 3.882

Review 4.  MAP kinase p38 inhibitors: clinical results and an intimate look at their interactions with p38alpha protein.

Authors:  Matthew R Lee; Celia Dominguez
Journal:  Curr Med Chem       Date:  2005       Impact factor: 4.530

5.  Effect of metal ions on high-affinity binding of pseudosubstrate inhibitors to PKA.

Authors:  Bastian Zimmermann; Sonja Schweinsberg; Stephan Drewianka; Friedrich W Herberg
Journal:  Biochem J       Date:  2008-07-01       Impact factor: 3.857

6.  Rapid measurement of binding constants and heats of binding using a new titration calorimeter.

Authors:  T Wiseman; S Williston; J F Brandts; L N Lin
Journal:  Anal Biochem       Date:  1989-05-15       Impact factor: 3.365

Review 7.  Counting the calories to stay in the groove.

Authors:  J E Ladbury
Journal:  Structure       Date:  1995-07-15       Impact factor: 5.006

Review 8.  p38 MAP kinase inhibitors: many are made, but few are chosen.

Authors:  Celia Dominguez; David A Powers; Nuria Tamayo
Journal:  Curr Opin Drug Discov Devel       Date:  2005-07

9.  Fluorescence quenching of dyes by tryptophan: interactions at atomic detail from combination of experiment and computer simulation.

Authors:  Andrea C Vaiana; Hannes Neuweiler; Andreas Schulz; Jürgen Wolfrum; Markus Sauer; Jeremy C Smith
Journal:  J Am Chem Soc       Date:  2003-11-26       Impact factor: 15.419

10.  Inhibition of p38 MAP kinase by utilizing a novel allosteric binding site.

Authors:  Christopher Pargellis; Liang Tong; Laurie Churchill; Pier F Cirillo; Thomas Gilmore; Anne G Graham; Peter M Grob; Eugene R Hickey; Neil Moss; Susan Pav; John Regan
Journal:  Nat Struct Biol       Date:  2002-04
View more
  253 in total

1.  Modeling thermophoretic effects in solid-state nanopores.

Authors:  Maxim Belkin; Shu-Han Chao; Gino Giannetti; Aleksei Aksimentiev
Journal:  J Comput Electron       Date:  2014-12-01       Impact factor: 1.807

2.  Discovery, structure-activity relationship, and biological evaluation of noninhibitory small molecule chaperones of glucocerebrosidase.

Authors:  Samarjit Patnaik; Wei Zheng; Jae H Choi; Omid Motabar; Noel Southall; Wendy Westbroek; Wendy A Lea; Arash Velayati; Ehud Goldin; Ellen Sidransky; William Leister; Juan J Marugan
Journal:  J Med Chem       Date:  2012-06-08       Impact factor: 7.446

3.  Erythropoietin Stimulates Tumor Growth via EphB4.

Authors:  Sunila Pradeep; Jie Huang; Edna M Mora; Alpa M Nick; Min Soon Cho; Sherry Y Wu; Kyunghee Noh; Chad V Pecot; Rajesha Rupaimoole; Martin A Stein; Stephan Brock; Yunfei Wen; Chiyi Xiong; Kshipra Gharpure; Jean M Hansen; Archana S Nagaraja; Rebecca A Previs; Pablo Vivas-Mejia; Hee Dong Han; Wei Hu; Lingegowda S Mangala; Behrouz Zand; Loren J Stagg; John E Ladbury; Bulent Ozpolat; S Neslihan Alpay; Masato Nishimura; Rebecca L Stone; Koji Matsuo; Guillermo N Armaiz-Peña; Heather J Dalton; Christopher Danes; Blake Goodman; Cristian Rodriguez-Aguayo; Carola Kruger; Armin Schneider; Shyon Haghpeykar; Padmavathi Jaladurgam; Mien-Chie Hung; Robert L Coleman; Jinsong Liu; Chun Li; Diana Urbauer; Gabriel Lopez-Berestein; David B Jackson; Anil K Sood
Journal:  Cancer Cell       Date:  2015-10-17       Impact factor: 31.743

4.  An isoform-specific C/EBPβ inhibitor targets acute myeloid leukemia cells.

Authors:  A Jakobs; S Uttarkar; C Schomburg; S Steinmann; A Coulibaly; P Schlenke; W E Berdel; C Müller-Tidow; T J Schmidt; K-H Klempnauer
Journal:  Leukemia       Date:  2016-02-08       Impact factor: 11.528

5.  The two paralogous kiwellin proteins KWL1 and KWL1-b from maize are structurally related and have overlapping functions in plant defense.

Authors:  Florian Altegoer; Paul Weiland; Pietro Ivan Giammarinaro; Sven-Andreas Freibert; Lynn Binnebesel; Xiaowei Han; Alexander Lepak; Regine Kahmann; Marcus Lechner; Gert Bange
Journal:  J Biol Chem       Date:  2020-04-28       Impact factor: 5.157

6.  Thermodynamic origins of protein folding, allostery, and capsid formation in the human hepatitis B virus core protein.

Authors:  Crispin G Alexander; Maike C Jürgens; Dale A Shepherd; Stefan M V Freund; Alison E Ashcroft; Neil Ferguson
Journal:  Proc Natl Acad Sci U S A       Date:  2013-07-03       Impact factor: 11.205

7.  Novel dengue virus NS2B/NS3 protease inhibitors.

Authors:  Hongmei Wu; Stefanie Bock; Mariya Snitko; Thilo Berger; Thomas Weidner; Steven Holloway; Manuel Kanitz; Wibke E Diederich; Holger Steuber; Christof Walter; Daniela Hofmann; Benedikt Weißbrich; Ralf Spannaus; Eliana G Acosta; Ralf Bartenschlager; Bernd Engels; Tanja Schirmeister; Jochen Bodem
Journal:  Antimicrob Agents Chemother       Date:  2014-12-08       Impact factor: 5.191

8.  The BADC and BCCP subunits of chloroplast acetyl-CoA carboxylase sense the pH changes of the light-dark cycle.

Authors:  Yajin Ye; Yan G Fulcher; David J Sliman; Mizani T Day; Mark J Schroeder; Rama K Koppisetti; Philip D Bates; Jay J Thelen; Steven R Van Doren
Journal:  J Biol Chem       Date:  2020-05-27       Impact factor: 5.157

Review 9.  Functional protein nanostructures: a chemical toolbox.

Authors:  Seah Ling Kuan; Fernando R G Bergamini; Tanja Weil
Journal:  Chem Soc Rev       Date:  2018-11-19       Impact factor: 54.564

10.  Basic Residues of β-Sheet A Contribute to Heparin Binding and Activation of Vaspin (Serpin A12).

Authors:  David Ulbricht; Kathrin Oertwig; Kristin Arnsburg; Anja Saalbach; Jan Pippel; Norbert Sträter; John T Heiker
Journal:  J Biol Chem       Date:  2016-12-09       Impact factor: 5.157

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.