Literature DB >> 2181232

Processes of genome evolution reflected by base frequency differences among Serratia marcescens genes.

P M Sharp1.   

Abstract

The G + C content of silent sites in codons varies greatly among Serratia marcescens genes; the value in any one gene seems to reflect a balance between mutation pressure towards high G + C content and natural selection constraining choice among synonymous codons. Interestingly, non-coding sequences have substantially lower G + C content than silent sites thought to be under little selective constraint.

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Year:  1990        PMID: 2181232     DOI: 10.1111/j.1365-2958.1990.tb02020.x

Source DB:  PubMed          Journal:  Mol Microbiol        ISSN: 0950-382X            Impact factor:   3.501


  11 in total

Review 1.  Switches in species-specific codon preferences: the influence of mutation biases.

Authors:  D C Shields
Journal:  J Mol Evol       Date:  1990-08       Impact factor: 2.395

2.  Site-specific codon bias in bacteria.

Authors:  J M Smith; N H Smith
Journal:  Genetics       Date:  1996-03       Impact factor: 4.562

3.  Codon usage bias and base composition of nuclear genes in Drosophila.

Authors:  E N Moriyama; D L Hartl
Journal:  Genetics       Date:  1993-07       Impact factor: 4.562

Review 4.  Organization of the bacterial chromosome.

Authors:  S Krawiec; M Riley
Journal:  Microbiol Rev       Date:  1990-12

5.  Compositional heterogeneity of the Escherichia coli genome: a role for VSP repair?

Authors:  G Gutiérrez; J Casadesús; J L Oliver; A Marín
Journal:  J Mol Evol       Date:  1994-10       Impact factor: 2.395

6.  Evolution of the recA gene and the molecular phylogeny of bacteria.

Authors:  A T Lloyd; P M Sharp
Journal:  J Mol Evol       Date:  1993-10       Impact factor: 2.395

Review 7.  Determinants of DNA sequence divergence between Escherichia coli and Salmonella typhimurium: codon usage, map position, and concerted evolution.

Authors:  P M Sharp
Journal:  J Mol Evol       Date:  1991-07       Impact factor: 2.395

8.  Molecular considerations in the evolution of bacterial genes.

Authors:  J G Lawrence; D L Hartl; H Ochman
Journal:  J Mol Evol       Date:  1991-09       Impact factor: 2.395

9.  An aromatic-dependent mutant of the fish pathogen Aeromonas salmonicida is attenuated in fish and is effective as a live vaccine against the salmonid disease furunculosis.

Authors:  L M Vaughan; P R Smith; T J Foster
Journal:  Infect Immun       Date:  1993-05       Impact factor: 3.441

10.  Regional base composition variation along yeast chromosome III: evolution of chromosome primary structure.

Authors:  P M Sharp; A T Lloyd
Journal:  Nucleic Acids Res       Date:  1993-01-25       Impact factor: 16.971

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