Literature DB >> 21811849

Characterization of a novel flooding stress-responsive alcohol dehydrogenase expressed in soybean roots.

Setsuko Komatsu1, Thibaut Deschamps, Deschamps Thibaut, Susumu Hiraga, Mikio Kato, Mitsuru Chiba, Akiko Hashiguchi, Makoto Tougou, Satoshi Shimamura, Hiroshi Yasue.   

Abstract

Alcohol dehydrogenase (Adh) is the key enzyme in alcohol fermentation. We analyzed Adh expression in order to clarify the role of Adh of soybeans (Glycine max) to flooding stress. Proteome analysis confirmed that expression of Adh is significantly upregulated in 4-day-old soybean seedlings subjected to 2 days of flooding. Southern hybridization analysis and soybean genome database search revealed that soybean has at least 6 Adh genes. The GmAdh2 gene that responded to flooding was isolated from soybean cultivar Enrei. Adh2 expression was markedly increased 6 h after flooding and decreased 24 h after floodwater drainage. In situ hybridization and Western blot indicated that flooding strongly induces Adh2 expression in RNA and protein levels in the root apical meristem. Osmotic, cold, or drought stress did not induce expression of Adh2. These results indicate that Adh2 is a flooding-response specific soybean gene expressed in root tissue.

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Year:  2011        PMID: 21811849     DOI: 10.1007/s11103-011-9812-y

Source DB:  PubMed          Journal:  Plant Mol Biol        ISSN: 0167-4412            Impact factor:   4.076


  40 in total

1.  Comparative proteomic analysis of early-stage soybean seedlings responses to flooding by using gel and gel-free techniques.

Authors:  Yohei Nanjo; Ludovit Skultety; Yahya Ashraf; Setsuko Komatsu
Journal:  J Proteome Res       Date:  2010-08-06       Impact factor: 4.466

2.  Response and adaptation by plants to flooding stress.

Authors:  M B Jackson; T D Colmer
Journal:  Ann Bot       Date:  2005-09       Impact factor: 4.357

Review 3.  Relating protein motion to catalysis.

Authors:  Sharon Hammes-Schiffer; Stephen J Benkovic
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Journal:  Nature       Date:  2009-08-20       Impact factor: 49.962

Review 5.  Structural classification of proteins: new superfamilies.

Authors:  A G Murzin
Journal:  Curr Opin Struct Biol       Date:  1996-06       Impact factor: 6.809

6.  Peptide mapping by limited proteolysis in sodium dodecyl sulfate and analysis by gel electrophoresis.

Authors:  D W Cleveland; S G Fischer; M W Kirschner; U K Laemmli
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7.  Stem hypertrophic lenticels and secondary aerenchyma enable oxygen transport to roots of soybean in flooded soil.

Authors:  Satoshi Shimamura; Ryo Yamamoto; Takuji Nakamura; Shinji Shimada; Setsuko Komatsu
Journal:  Ann Bot       Date:  2010-08       Impact factor: 4.357

8.  A flooding-induced xyloglucan endo-transglycosylase homolog in maize is responsive to ethylene and associated with aerenchyma.

Authors:  I N Saab; M M Sachs
Journal:  Plant Physiol       Date:  1996-09       Impact factor: 8.340

9.  Transgenic AEQUORIN reveals organ-specific cytosolic Ca2+ responses to anoxia and Arabidopsis thaliana seedlings.

Authors:  J C Sedbrook; P J Kronebusch; G G Borisy; A J Trewavas; P H Masson
Journal:  Plant Physiol       Date:  1996-05       Impact factor: 8.340

Review 10.  Soybean proteomics and its application to functional analysis.

Authors:  Setsuko Komatsu; Nagib Ahsan
Journal:  J Proteomics       Date:  2008-11-05       Impact factor: 4.044

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  20 in total

1.  Analysis of flooding-responsive proteins localized in the nucleus of soybean root tips.

Authors:  Setsuko Komatsu; Susumu Hiraga; Mohammad Zaman Nouri
Journal:  Mol Biol Rep       Date:  2014-01-03       Impact factor: 2.316

2.  Analysis of response mechanism in soybean under low oxygen and flooding stresses using gel-base proteomics technique.

Authors:  Amana Khatoon; Shafiq Rehman; Myeong-Won Oh; Sun-Hee Woo; Setsuko Komatsu
Journal:  Mol Biol Rep       Date:  2012-10-07       Impact factor: 2.316

3.  CbADH1 improves plant cold tolerance.

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Journal:  Plant Signal Behav       Date:  2019-05-06

4.  Ectopic expression of CaRLK1 enhances hypoxia tolerance with increasing alanine production in Nicotiana spp.

Authors:  Dong Ju Lee; Youn-Tae Chi; Dong Min Kim; Seung-Hyun Choi; Ji Young Lee; Go-Woo Choi
Journal:  Plant Mol Biol       Date:  2014-07-17       Impact factor: 4.076

5.  The sunflower transcription factor HaWRKY76 confers drought and flood tolerance to Arabidopsis thaliana plants without yield penalty.

Authors:  Jesica Raineri; Karina F Ribichich; Raquel L Chan
Journal:  Plant Cell Rep       Date:  2015-08-06       Impact factor: 4.570

6.  Genome-wide identification of alcohol dehydrogenase (ADH) gene family under waterlogging stress in wheat (Triticum aestivum).

Authors:  Changwei Shen; Jingping Yuan; Xingqi Ou; Xiujuan Ren; Xinhua Li
Journal:  PeerJ       Date:  2021-07-23       Impact factor: 2.984

7.  Proteomic and biochemical analyses of the cotyledon and root of flooding-stressed soybean plants.

Authors:  Setsuko Komatsu; Takahiro Makino; Hiroshi Yasue
Journal:  PLoS One       Date:  2013-06-14       Impact factor: 3.240

8.  Gel-free proteomic analysis of soybean root proteins affected by calcium under flooding stress.

Authors:  MyeongWon Oh; Yohei Nanjo; Setsuko Komatsu
Journal:  Front Plant Sci       Date:  2014-10-20       Impact factor: 5.753

9.  The Alcohol Dehydrogenase Gene Family in Melon (Cucumis melo L.): Bioinformatic Analysis and Expression Patterns.

Authors:  Yazhong Jin; Chong Zhang; Wei Liu; Yufan Tang; Hongyan Qi; Hao Chen; Songxiao Cao
Journal:  Front Plant Sci       Date:  2016-05-18       Impact factor: 5.753

10.  Screening of Key Proteins Affecting Floral Initiation of Saffron Under Cold Stress Using iTRAQ-Based Proteomics.

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Journal:  Front Plant Sci       Date:  2021-05-11       Impact factor: 5.753

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