Literature DB >> 21797671

Contribution of disulfide bonds to stability, folding, and amyloid fibril formation: the PI3-SH3 domain case.

Ricardo Graña-Montes1, Natalia S de Groot, Virginia Castillo, Javier Sancho, Adrian Velazquez-Campoy, Salvador Ventura.   

Abstract

AIMS: The failure of proteins to fold or to remain folded very often leads to their deposition into amyloid fibrils and is the origin of a variety of human diseases. Accordingly, mutations that destabilize the native conformation are associated with pathological phenotypes in several protein models. Protein backbone cyclization by disulfide bond crosslinking strongly reduces the entropy of the unfolded state and, usually, increases protein stability. The effect of protein cyclization on the thermodynamic and kinetics of folding has been extensively studied, but little is know on its effect on aggregation reactions.
RESULTS: The SRC homology 3 domain (SH3) of p85α subunit of bovine phosphatidyl-inositol-3'-kinase (PI3-SH3) domain is a small globular protein, whose folding and amyloid properties are well characterized. Here we describe the effect of polypeptide backbone cyclization on both processes. INNOVATION: We show that a cyclized PI3-SH3 variant is more stable, folds faster, aggregates slower, and forms conformationally and functionally different amyloid fibrils than the wild-type domain.
CONCLUSION: Disulfide bridges may act as key molecular determinants of both productive protein folding and deleterious aggregation reactions.

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Year:  2011        PMID: 21797671     DOI: 10.1089/ars.2011.3936

Source DB:  PubMed          Journal:  Antioxid Redox Signal        ISSN: 1523-0864            Impact factor:   8.401


  10 in total

1.  Association between foldability and aggregation propensity in small disulfide-rich proteins.

Authors:  Hugo Fraga; Ricardo Graña-Montes; Ricard Illa; Giovanni Covaleda; Salvador Ventura
Journal:  Antioxid Redox Signal       Date:  2014-05-05       Impact factor: 8.401

2.  Functional analysis of the accessory protein TapA in Bacillus subtilis amyloid fiber assembly.

Authors:  Diego Romero; Hera Vlamakis; Richard Losick; Roberto Kolter
Journal:  J Bacteriol       Date:  2014-01-31       Impact factor: 3.490

3.  A Single-Molecule Strategy to Capture Non-native Intramolecular and Intermolecular Protein Disulfide Bridges.

Authors:  Marc Mora; Stephanie Board; Olivier Languin-Cattoën; Laura Masino; Guillaume Stirnemann; Sergi Garcia-Manyes
Journal:  Nano Lett       Date:  2022-05-12       Impact factor: 12.262

4.  Ordered self-assembly mechanism of a spherical oncoprotein oligomer triggered by zinc removal and stabilized by an intrinsically disordered domain.

Authors:  Clara Smal; Leonardo G Alonso; Diana E Wetzler; Angeles Heer; Gonzalo de Prat Gay
Journal:  PLoS One       Date:  2012-05-09       Impact factor: 3.240

5.  Rational stabilization of complex proteins: a divide and combine approach.

Authors:  Emilio Lamazares; Isabel Clemente; Marta Bueno; Adrián Velázquez-Campoy; Javier Sancho
Journal:  Sci Rep       Date:  2015-03-16       Impact factor: 4.379

6.  The structural basis of nanobody unfolding reversibility and thermoresistance.

Authors:  Patrick Kunz; Katinka Zinner; Norbert Mücke; Tanja Bartoschik; Serge Muyldermans; Jörg D Hoheisel
Journal:  Sci Rep       Date:  2018-05-21       Impact factor: 4.379

7.  Biasing the native α-synuclein conformational ensemble towards compact states abolishes aggregation and neurotoxicity.

Authors:  Anita Carija; Francisca Pinheiro; Jordi Pujols; Inês C Brás; Diana Fernandes Lázaro; Carlo Santambrogio; Rita Grandori; Tiago F Outeiro; Susanna Navarro; Salvador Ventura
Journal:  Redox Biol       Date:  2019-02-05       Impact factor: 11.799

8.  Mechanism of protein kinetic stabilization by engineered disulfide crosslinks.

Authors:  Inmaculada Sanchez-Romero; Antonio Ariza; Keith S Wilson; Michael Skjøt; Jesper Vind; Leonardo De Maria; Lars K Skov; Jose M Sanchez-Ruiz
Journal:  PLoS One       Date:  2013-07-30       Impact factor: 3.240

9.  Preventing disulfide bond formation weakens non-covalent forces among lysozyme aggregates.

Authors:  Vijay Kumar Ravi; Mohit Goel; Hema Chandra Kotamarthi; Sri Rama Koti Ainavarapu; Rajaram Swaminathan
Journal:  PLoS One       Date:  2014-02-14       Impact factor: 3.240

10.  Intrinsic Disorder-Based Design of Stable Globular Proteins.

Authors:  Galina S Nagibina; Ksenia A Glukhova; Vladimir N Uversky; Tatiana N Melnik; Bogdan S Melnik
Journal:  Biomolecules       Date:  2019-12-30
  10 in total

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