Literature DB >> 21795730

Development of 12 genic microsatellite loci for a biofuel grass, Miscanthus sinensis (Poaceae).

Chuan-Wen Ho1, Tai-Han Wu, Tsai-Wen Hsu, Jao-Ching Huang, Chi-Chun Huang, Tzen-Yuh Chiang.   

Abstract

PREMISE OF THE STUDY: Miscanthus, a nonfood plant with high potential as a biofuel, has been used in Europe and the United States. The selection of a cultivar with high biomass, photosynthetic efficiency, and stress resistance from wild populations has become an important issue. New genic microsatellite markers will aid the assessment of genetic diversity for different strains. METHODS AND
RESULTS: Twelve polymorphic microsatellite markers derived from the transcriptome of Miscanthus sinensis fo. glaber were identified and screened on 80 individuals of M. sinensis. The number of alleles per locus ranged from 6 to 12, and the mean expected heterozygosity was 0.75. Cross-taxa transferability revealed that all loci can be applied to all varieties of M. sinensis, as well as the closely related species M. floridulus.
CONCLUSIONS: These new genic microsatellite markers are useful for characterizing different traits in breeding programs or to select genes useful for biofuel.

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Year:  2011        PMID: 21795730     DOI: 10.3732/ajb.1100071

Source DB:  PubMed          Journal:  Am J Bot        ISSN: 0002-9122            Impact factor:   3.844


  6 in total

1.  Marker-Trait Association for Biomass Yield of Potential Bio-fuel Feedstock Miscanthus sinensis from Southwest China.

Authors:  Gang Nie; Linkai Huang; Xinquan Zhang; Megan Taylor; Yiwei Jiang; Xiaoqing Yu; Xinchun Liu; Xinyu Wang; Yajie Zhang
Journal:  Front Plant Sci       Date:  2016-06-07       Impact factor: 5.753

2.  High resolution genetic mapping by genome sequencing reveals genome duplication and tetraploid genetic structure of the diploid Miscanthus sinensis.

Authors:  Xue-Feng Ma; Elaine Jensen; Nickolai Alexandrov; Maxim Troukhan; Liping Zhang; Sian Thomas-Jones; Kerrie Farrar; John Clifton-Brown; Iain Donnison; Timothy Swaller; Richard Flavell
Journal:  PLoS One       Date:  2012-03-16       Impact factor: 3.240

3.  Genome-wide distribution comparative and composition analysis of the SSRs in Poaceae.

Authors:  Yi Wang; Chao Yang; Qiaojun Jin; Dongjie Zhou; Shuangshuang Wang; Yuanjie Yu; Long Yang
Journal:  BMC Genet       Date:  2015-02-15       Impact factor: 2.797

4.  Development of SSR Markers Based on Transcriptome Sequencing and Association Analysis with Drought Tolerance in Perennial Grass Miscanthus from China.

Authors:  Gang Nie; Lu Tang; Yajie Zhang; Linkai Huang; Xiao Ma; Xin Cao; Ling Pan; Xu Zhang; Xinquan Zhang
Journal:  Front Plant Sci       Date:  2017-05-16       Impact factor: 5.753

5.  Isolation and characterization of microsatellite loci for a bioenergy grass, Miscanthus sacchariflorus (Poaceae).

Authors:  Hai-Fei Zhou; Shan-Shan Li; Song Ge
Journal:  Appl Plant Sci       Date:  2013-01-02       Impact factor: 1.936

6.  Nuclear SSR markers for Miscanthus, Saccharum, and related grasses (Saccharinae, Poaceae).

Authors:  Trevor R Hodkinson; Mariateresa de Cesare; Susanne Barth
Journal:  Appl Plant Sci       Date:  2013-11-07       Impact factor: 1.936

  6 in total

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