Literature DB >> 21785810

Mutation pattern of paired immunoglobulin heavy and light variable domains in chronic lymphocytic leukemia B cells.

Fabio Ghiotto1, Paolo Marcatili, Claudya Tenca, Maria Grazia Calevo, Xiao-Jie Yan, Emilia Albesiano, Davide Bagnara, Monica Colombo, Giovanna Cutrona, Charles C Chu, Fortunato Morabito, Silvia Bruno, Manlio Ferrarini, Anna Tramontano, Franco Fais, Nicholas Chiorazzi.   

Abstract

B-cell chronic lymphocytic leukemia (CLL) patients display leukemic clones bearing either germline or somatically mutated immunoglobulin heavy variable (IGHV ) genes. Most information on CLL immunoglobulins (Igs), such as the definition of stereotyped B-cell receptors (BCRs), was derived from germline unmutated Igs. In particular, detailed studies on the distribution and nature of mutations in paired heavy- and light-chain domains of CLL clones bearing mutated Igs are lacking. To address the somatic hyper-mutation dynamics of CLL Igs, we analyzed the mutation pattern of paired IGHV-diversity-joining (IGHV-D-J ) and immunoglobulin kappa/lambda variable-joining (IGK/LV-J ) rearrangements of 193 leukemic clones that displayed ≥ 2% mutations in at least one of the two immunoglobulin variable (IGV ) genes (IGHV and/or IGK/LV ). The relationship between the mutation frequency in IGHV and IGK/LV complementarity determining regions (CDRs) and framework regions (FRs) was evaluated by correlation analysis. Replacement (R) mutation frequency within IGK/LV chain CDRs correlated significantly with mutation frequency of paired IGHV CDRs in λ but not κ isotype CLL clones. CDRs of IGKV-J rearrangements displayed a lower percentage of R mutations than IGHVs. The frequency/pattern of mutations in kappa CLL Igs differed also from that in κ-expressing normal B cells described in the literature. Instead, the mutation frequency within the FRs of IGHV and either IGKV or IGLV was correlated. Notably, the amount of diversity introduced by replaced amino acids was comparable between IGHVs and IGKVs. The data indicate a different mutation pattern between κ and λ isotype CLL clones and suggest an antigenic selection that, in κ samples, operates against CDR variation.

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Year:  2011        PMID: 21785810      PMCID: PMC3321824          DOI: 10.2119/molmed.2011.00104

Source DB:  PubMed          Journal:  Mol Med        ISSN: 1076-1551            Impact factor:   6.354


  26 in total

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Journal:  Best Pract Res Clin Haematol       Date:  2010-03       Impact factor: 3.020

3.  Differences in potential for amino acid change after mutation reveals distinct strategies for kappa and lambda light-chain variation.

Authors:  Uri Hershberg; Mark J Shlomchik
Journal:  Proc Natl Acad Sci U S A       Date:  2006-10-12       Impact factor: 11.205

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Journal:  Bioinformatics       Date:  2008-07-19       Impact factor: 6.937

5.  Evidence for the significant role of immunoglobulin light chains in antigen recognition and selection in chronic lymphocytic leukemia.

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6.  Gene expression profiling of B cell chronic lymphocytic leukemia reveals a homogeneous phenotype related to memory B cells.

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7.  Over 20% of patients with chronic lymphocytic leukemia carry stereotyped receptors: Pathogenetic implications and clinical correlations.

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Journal:  Blood       Date:  2006-09-19       Impact factor: 22.113

8.  Extensive intraclonal diversification in a subgroup of chronic lymphocytic leukemia patients with stereotyped IGHV4-34 receptors: implications for ongoing interactions with antigen.

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Journal:  Blood       Date:  2009-08-27       Impact factor: 22.113

9.  Receptor revision of immunoglobulin heavy chain variable region genes in normal human B lymphocytes.

Authors:  P C Wilson; K Wilson; Y J Liu; J Banchereau; V Pascual; J D Capra
Journal:  J Exp Med       Date:  2000-06-05       Impact factor: 14.307

10.  Immunoglobulin heavy chain variable region gene replacement As a mechanism for receptor revision in rheumatoid arthritis synovial tissue B lymphocytes.

Authors:  K Itoh; E Meffre; E Albesiano; A Farber; D Dines; P Stein; S E Asnis; R A Furie; R I Jain; N Chiorazzi
Journal:  J Exp Med       Date:  2000-10-16       Impact factor: 14.307

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2.  LYRA, a webserver for lymphocyte receptor structural modeling.

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Journal:  Bioinformatics       Date:  2014-06-13       Impact factor: 6.937

4.  Tabhu: tools for antibody humanization.

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Journal:  Bioinformatics       Date:  2014-10-09       Impact factor: 6.937

5.  Integrating multiple immunogenetic data sources for feature extraction and mining somatic hypermutation patterns: the case of "towards analysis" in chronic lymphocytic leukaemia.

Authors:  Ioannis Kavakiotis; Aliki Xochelli; Andreas Agathangelidis; Grigorios Tsoumakas; Nicos Maglaveras; Kostas Stamatopoulos; Anastasia Hadzidimitriou; Ioannis Vlahavas; Ioanna Chouvarda
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