Literature DB >> 21782790

Genetic-code evolution for protein synthesis with non-natural amino acids.

Takahito Mukai1, Tatsuo Yanagisawa, Kazumasa Ohtake, Masatoshi Wakamori, Jiro Adachi, Nobumasa Hino, Aya Sato, Takatsugu Kobayashi, Akiko Hayashi, Mikako Shirouzu, Takashi Umehara, Shigeyuki Yokoyama, Kensaku Sakamoto.   

Abstract

The genetic encoding of synthetic or "non-natural" amino acids promises to diversify the functions and structures of proteins. We applied rapid codon-reassignment for creating Escherichia coli strains unable to terminate translation at the UAG "stop" triplet, but efficiently decoding it as various tyrosine and lysine derivatives. This complete change in the UAG meaning enabled protein synthesis with these non-natural molecules at multiple defined sites, in addition to the 20 canonical amino acids. UAG was also redefined in the E. coli BL21 strain, suitable for the large-scale production of recombinant proteins, and its cell extract served the cell-free synthesis of an epigenetic protein, histone H4, fully acetylated at four specific lysine sites.
Copyright © 2011 Elsevier Inc. All rights reserved.

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Year:  2011        PMID: 21782790     DOI: 10.1016/j.bbrc.2011.07.020

Source DB:  PubMed          Journal:  Biochem Biophys Res Commun        ISSN: 0006-291X            Impact factor:   3.575


  30 in total

1.  Ubiquitin acetylation inhibits polyubiquitin chain elongation.

Authors:  Fumiaki Ohtake; Yasushi Saeki; Kensaku Sakamoto; Kazumasa Ohtake; Hiroyuki Nishikawa; Hikaru Tsuchiya; Tomohiko Ohta; Keiji Tanaka; Jun Kanno
Journal:  EMBO Rep       Date:  2014-12-19       Impact factor: 8.807

Review 2.  Histones: at the crossroads of peptide and protein chemistry.

Authors:  Manuel M Müller; Tom W Muir
Journal:  Chem Rev       Date:  2014-10-20       Impact factor: 60.622

3.  Efficient decoding of the UAG triplet as a full-fledged sense codon enhances the growth of a prfA-deficient strain of Escherichia coli.

Authors:  Kazumasa Ohtake; Aya Sato; Takahito Mukai; Nobumasa Hino; Shigeyuki Yokoyama; Kensaku Sakamoto
Journal:  J Bacteriol       Date:  2012-03-16       Impact factor: 3.490

4.  Expanding the amino acid repertoire of ribosomal polypeptide synthesis via the artificial division of codon boxes.

Authors:  Yoshihiko Iwane; Azusa Hitomi; Hiroshi Murakami; Takayuki Katoh; Yuki Goto; Hiroaki Suga
Journal:  Nat Chem       Date:  2016-02-01       Impact factor: 24.427

5.  Crystal structure of eukaryotic translation initiation factor 2B.

Authors:  Kazuhiro Kashiwagi; Mari Takahashi; Madoka Nishimoto; Takuya B Hiyama; Toshiaki Higo; Takashi Umehara; Kensaku Sakamoto; Takuhiro Ito; Shigeyuki Yokoyama
Journal:  Nature       Date:  2016-02-22       Impact factor: 49.962

Review 6.  Rewriting the Genetic Code.

Authors:  Takahito Mukai; Marc J Lajoie; Markus Englert; Dieter Söll
Journal:  Annu Rev Microbiol       Date:  2017-07-11       Impact factor: 15.500

7.  Multiple site-selective insertions of noncanonical amino acids into sequence-repetitive polypeptides.

Authors:  I-Lin Wu; Melissa A Patterson; Holly E Carpenter Desai; Ryan A Mehl; Gianluca Giorgi; Vincent P Conticello
Journal:  Chembiochem       Date:  2013-04-26       Impact factor: 3.164

8.  Quantification of the effect of site-specific histone acetylation on chromatin transcription rate.

Authors:  Masatoshi Wakamori; Kohki Okabe; Kiyoe Ura; Takashi Funatsu; Masahiro Takinoue; Takashi Umehara
Journal:  Nucleic Acids Res       Date:  2020-12-16       Impact factor: 16.971

9.  Polyspecific pyrrolysyl-tRNA synthetases from directed evolution.

Authors:  Li-Tao Guo; Yane-Shih Wang; Akiyoshi Nakamura; Daniel Eiler; Jennifer M Kavran; Margaret Wong; Laura L Kiessling; Thomas A Steitz; Patrick O'Donoghue; Dieter Söll
Journal:  Proc Natl Acad Sci U S A       Date:  2014-11-10       Impact factor: 11.205

10.  Enhanced phosphoserine insertion during Escherichia coli protein synthesis via partial UAG codon reassignment and release factor 1 deletion.

Authors:  Ilka U Heinemann; Alexis J Rovner; Hans R Aerni; Svetlana Rogulina; Laura Cheng; William Olds; Jonathan T Fischer; Dieter Söll; Farren J Isaacs; Jesse Rinehart
Journal:  FEBS Lett       Date:  2012-09-13       Impact factor: 4.124

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