Literature DB >> 21771634

Pervasive transcription - Lessons from yeast.

Mathieu Tisseur1, Marta Kwapisz, Antonin Morillon.   

Abstract

Pervasive transcription is now accepted to be a general feature of eukaryotic genomes, generating short and long non-coding RNAs (ncRNAs). Growing number of examples have shown that regulatory ncRNAs can control gene expression and chromatin domain formation. In this review, we discuss recent reports that show that Saccharomyces cerevisiae's genome also supports pervasive transcription, which is strongly controlled by RNA decay pathways and nucleosome positioning. We therefore propose that S. cerevisiae is an excellent model for studying large ncRNAs, which has already provided important examples of antisense-mediated transcriptional silencing.
Copyright © 2011 Elsevier Masson SAS. All rights reserved.

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Year:  2011        PMID: 21771634     DOI: 10.1016/j.biochi.2011.07.001

Source DB:  PubMed          Journal:  Biochimie        ISSN: 0300-9084            Impact factor:   4.079


  36 in total

1.  "Hypothesis for the modern RNA world": a pervasive non-coding RNA-based genetic regulation is a prerequisite for the emergence of multicellular complexity.

Authors:  Irma Lozada-Chávez; Peter F Stadler; Sonja J Prohaska
Journal:  Orig Life Evol Biosph       Date:  2012-02-10       Impact factor: 1.950

2.  Regulation of Antisense Transcription by NuA4 Histone Acetyltransferase and Other Chromatin Regulatory Factors.

Authors:  Bhawana Uprety; Amala Kaja; Jannatul Ferdoush; Rwik Sen; Sukesh R Bhaumik
Journal:  Mol Cell Biol       Date:  2016-01-11       Impact factor: 4.272

3.  Mechanisms of antisense transcription initiation from the 3' end of the GAL10 coding sequence in vivo.

Authors:  Shivani Malik; Geetha Durairaj; Sukesh R Bhaumik
Journal:  Mol Cell Biol       Date:  2013-07-08       Impact factor: 4.272

Review 4.  Epigenetics and bacterial infections.

Authors:  Hélène Bierne; Mélanie Hamon; Pascale Cossart
Journal:  Cold Spring Harb Perspect Med       Date:  2012-12-01       Impact factor: 6.915

Review 5.  LncRNAs, lost in translation or licence to regulate?

Authors:  Alvaro de Andres-Pablo; Antonin Morillon; Maxime Wery
Journal:  Curr Genet       Date:  2016-05-26       Impact factor: 3.886

6.  Readthrough Errors Purge Deleterious Cryptic Sequences, Facilitating the Birth of Coding Sequences.

Authors:  Luke J Kosinski; Joanna Masel
Journal:  Mol Biol Evol       Date:  2020-06-01       Impact factor: 16.240

Review 7.  The INO80 remodeller in transcription, replication and repair.

Authors:  Jérôme Poli; Susan M Gasser; Manolis Papamichos-Chronakis
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2017-10-05       Impact factor: 6.237

Review 8.  Encoding activities of non-coding RNAs.

Authors:  Yanan Pang; Chuanbin Mao; Shanrong Liu
Journal:  Theranostics       Date:  2018-03-28       Impact factor: 11.556

Review 9.  The roles of non-coding RNAs in Parkinson's disease.

Authors:  Maryam Majidinia; Aynaz Mihanfar; Reza Rahbarghazi; Alireza Nourazarian; BakiyeGoker Bagca; Çığır Biray Avci
Journal:  Mol Biol Rep       Date:  2016-08-05       Impact factor: 2.316

Review 10.  The persistent contributions of RNA to eukaryotic gen(om)e architecture and cellular function.

Authors:  Jürgen Brosius
Journal:  Cold Spring Harb Perspect Biol       Date:  2014-07-31       Impact factor: 10.005

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