Literature DB >> 21768339

Synthetic analogues of [Fe4S4(Cys)3(His)] in hydrogenases and [Fe4S4(Cys)4] in HiPIP derived from all-ferric [Fe4S4{N(SiMe3)2}4].

Yasuhiro Ohki1, Kazuki Tanifuji, Norihiro Yamada, Motosuke Imada, Tomoyuki Tajima, Kazuyuki Tatsumi.   

Abstract

The all-ferric [Fe(4)S(4)](4+) cluster [Fe(4)S(4){N(SiMe(3))(2)}(4)] 1 and its one-electron reduced form [1](-) serve as convenient precursors for the synthesis of 31-site differentiated [Fe(4)S(4)] clusters and high-potential iron-sulfur protein (HiPIP) model clusters. The reaction of 1 with four equivalents (equiv) of the bulky thiol HSDmp (Dmp = 2,6-(mesityl)(2)C(6)H(3), mesityl = 2,4,6-Me(3)C(6)H(2)) followed by treatment with tetrahydrofuran (THF) resulted in the isolation of [Fe(4)S(4)(SDmp)(3)(THF)(3)] 2. Cluster 2 contains an octahedral iron atom with three THF ligands, and its Fe(S)(3)(O)(3) coordination environment is relevant to that in the active site of substrate-bound aconitase. An analogous reaction of [1](-) with four equiv of HSDmp gave [Fe(4)S(4)(SDmp)(4)](-) 3, which models the oxidized form of HiPIP. The THF ligands in 2 can be replaced by tetramethyl-imidazole (Me(4)Im) to give [Fe(4)S(4)(SDmp)(3)(Me(4)Im)] 4 modeling the [Fe(4)S(4)(Cys)(3)(His)] cluster in hydrogenases, and its one-electron reduced form [4](-) was synthesized from the reaction of 3 with Me(4)Im. The reversible redox couple between 3 and [3](-) was observed at E(1/2) = -820 mV vs. Ag/Ag(+), and the corresponding reversible couple for 4 and [4](-) is positively shifted by +440 mV. The cyclic voltammogram of 3 also exhibited a reversible oxidation couple, which indicates generation of the all-ferric [Fe(4)S(4)](4+) cluster, [Fe(4)S(4)(SDmp)(4)].

Entities:  

Mesh:

Substances:

Year:  2011        PMID: 21768339      PMCID: PMC3150945          DOI: 10.1073/pnas.1106472108

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  27 in total

Review 1.  Synthetic analogues of the active sites of iron-sulfur proteins.

Authors:  P Venkateswara Rao; R H Holm
Journal:  Chem Rev       Date:  2004-02       Impact factor: 60.622

2.  Stabilization of 3:1 site-differentiated cubane-type clusters in the [Fe(4)S(4)](1+) core oxidation state by tertiary phosphine ligation: synthesis, core structural diversity, and S = 1/2 ground states.

Authors:  Liang Deng; Amit Majumdar; Wayne Lo; R H Holm
Journal:  Inorg Chem       Date:  2010-11-01       Impact factor: 5.165

3.  Synthesis of new [8Fe-7S] clusters: a topological link between the core structures of P-cluster, FeMo-co, and FeFe-co of nitrogenases.

Authors:  Yasuhiro Ohki; Yohei Ikagawa; Kazuyuki Tatsumi
Journal:  J Am Chem Soc       Date:  2007-08-03       Impact factor: 15.419

4.  An all-ferrous state of the Fe protein of nitrogenase. Interaction with nucleotides and electron transfer to the MoFe protein.

Authors:  H C Angove; S J Yoo; E Münck; B K Burgess
Journal:  J Biol Chem       Date:  1998-10-09       Impact factor: 5.157

5.  Noncysteinyl coordination to the [4Fe-4S]2+ cluster of the DNA repair adenine glycosylase MutY introduced via site-directed mutagenesis. Structural characterization of an unusual histidinyl-coordinated cluster.

Authors:  Troy E Messick; Nikolas H Chmiel; Marie-Pierre Golinelli; Michael R Langer; Leemor Joshua-Tor; Sheila S David
Journal:  Biochemistry       Date:  2002-03-26       Impact factor: 3.162

6.  [Fe(4)S(4)](q) cubane clusters (q = 4+, 3+, 2+) with terminal amide ligands.

Authors:  Christopher R Sharp; Jeremiah S Duncan; Sonny C Lee
Journal:  Inorg Chem       Date:  2010-07-19       Impact factor: 5.165

7.  Crystal structure of 4-hydroxybutyryl-CoA dehydratase: radical catalysis involving a [4Fe-4S] cluster and flavin.

Authors:  Berta M Martins; Holger Dobbek; Irfan Cinkaya; Wolfgang Buckel; Albrecht Messerschmidt
Journal:  Proc Natl Acad Sci U S A       Date:  2004-10-20       Impact factor: 11.205

8.  Crystal structures of aconitase with isocitrate and nitroisocitrate bound.

Authors:  H Lauble; M C Kennedy; H Beinert; C D Stout
Journal:  Biochemistry       Date:  1992-03-17       Impact factor: 3.162

9.  Synthetic analogs of the active sites of iron-sulfur proteins. VII. Ligand substitution reactions of the tetranuclear clusters (Fe4S4(SR)4)2- and the structure of ((CH3)4N)2(Fe4S4(SC6H5)4).

Authors:  L Que; M A Bobrik; J A Ibers; R H Holm
Journal:  J Am Chem Soc       Date:  1974-06-26       Impact factor: 15.419

10.  Solvent tuning of electrochemical potentials in the active sites of HiPIP versus ferredoxin.

Authors:  Abhishek Dey; Francis E Jenney; Michael W W Adams; Elena Babini; Yasuhiro Takahashi; Keiichi Fukuyama; Keith O Hodgson; Britt Hedman; Edward I Solomon
Journal:  Science       Date:  2007-11-30       Impact factor: 47.728

View more
  8 in total

Review 1.  Developments in the biomimetic chemistry of cubane-type and higher nuclearity iron-sulfur clusters.

Authors:  Sonny C Lee; Wayne Lo; R H Holm
Journal:  Chem Rev       Date:  2014-01-13       Impact factor: 60.622

2.  A [2Fe-1S] Complex That Affords Access to Bimetallic and Higher-Nuclearity Iron-Sulfur Clusters.

Authors:  Daniel E DeRosha; Nicholas A Arnet; Brandon Q Mercado; Patrick L Holland
Journal:  Inorg Chem       Date:  2019-06-19       Impact factor: 5.165

3.  A complete biomimetic iron-sulfur cubane redox series.

Authors:  Liam Grunwald; Martin Clémancey; Daniel Klose; Lionel Dubois; Serge Gambarelli; Gunnar Jeschke; Michael Wörle; Geneviève Blondin; Victor Mougel
Journal:  Proc Natl Acad Sci U S A       Date:  2022-07-26       Impact factor: 12.779

4.  An [Fe4S4]3+-Alkyl Cluster Stabilized by an Expanded Scorpionate Ligand.

Authors:  Alex McSkimming; Arun Sridharan; Niklas B Thompson; Peter Müller; Daniel L M Suess
Journal:  J Am Chem Soc       Date:  2020-08-06       Impact factor: 15.419

Review 5.  The Spectroscopy of Nitrogenases.

Authors:  Casey Van Stappen; Laure Decamps; George E Cutsail; Ragnar Bjornsson; Justin T Henthorn; James A Birrell; Serena DeBeer
Journal:  Chem Rev       Date:  2020-04-02       Impact factor: 60.622

6.  Resolving the structure of the E1 state of Mo nitrogenase through Mo and Fe K-edge EXAFS and QM/MM calculations.

Authors:  Casey Van Stappen; Albert Thor Thorhallsson; Laure Decamps; Ragnar Bjornsson; Serena DeBeer
Journal:  Chem Sci       Date:  2019-09-04       Impact factor: 9.825

7.  A conformational role for NifW in the maturation of molybdenum nitrogenase P-cluster.

Authors:  Casey Van Stappen; Emilio Jiménez-Vicente; Ana Pérez-González; Zhi-Yong Yang; Lance C Seefeldt; Serena DeBeer; Dennis R Dean; Laure Decamps
Journal:  Chem Sci       Date:  2022-02-28       Impact factor: 9.825

8.  Interactive Regulation of Formate Dehydrogenase during CO2 Fixation in Gas-Fermenting Bacteria.

Authors:  Lu Zhang; Yanqiang Liu; Ran Zhao; Can Zhang; Weihong Jiang; Yang Gu
Journal:  mBio       Date:  2020-08-18       Impact factor: 7.867

  8 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.