Literature DB >> 21756105

Synthetic poliovirus and other designer viruses: what have we learned from them?

Eckard Wimmer1, Aniko V Paul.   

Abstract

Owing to known genome sequences, modern strategies of DNA synthesis have made it possible to recreate in principle all known viruses independent of natural templates. We describe the first synthesis of a virus (poliovirus) in 2002 that was accomplished outside living cells. We comment on the reaction of laypeople and scientists to the work, which shaped the response to de novo syntheses of other viruses. We discuss those viruses that have been synthesized since 2002, among them viruses whose precise genome sequence had to be established by painstakingly stitching together pieces of sequence information, and viruses involved in zoonosis. Synthesizing viral genomes provides a powerful tool for studying gene function and the pathogenic potential of these organisms. It also allows modification of viral genomes to an extent hitherto unthinkable. Recoding of poliovirus and influenza virus to develop new vaccine candidates and refactoring the phage T7 DNA genome are discussed as examples.

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Year:  2011        PMID: 21756105     DOI: 10.1146/annurev-micro-090110-102957

Source DB:  PubMed          Journal:  Annu Rev Microbiol        ISSN: 0066-4227            Impact factor:   15.500


  12 in total

1.  Profile of Eckard Wimmer. Interview by Sujata Gupta.

Authors:  Eckard Wimmer
Journal:  Proc Natl Acad Sci U S A       Date:  2012-12-31       Impact factor: 11.205

2.  Computational reconstruction of Bole1a, a representative synthetic hepatitis C virus subtype 1a genome.

Authors:  Supriya Munshaw; Justin R Bailey; Lin Liu; William O Osburn; Kelly P Burke; Andrea L Cox; Stuart C Ray
Journal:  J Virol       Date:  2012-03-21       Impact factor: 5.103

3.  Limits of variation, specific infectivity, and genome packaging of massively recoded poliovirus genomes.

Authors:  Yutong Song; Oleksandr Gorbatsevych; Ying Liu; JoAnn Mugavero; Sam H Shen; Charles B Ward; Emmanuel Asare; Ping Jiang; Aniko V Paul; Steffen Mueller; Eckard Wimmer
Journal:  Proc Natl Acad Sci U S A       Date:  2017-09-25       Impact factor: 11.205

4.  Codon usage determines the mutational robustness, evolutionary capacity, and virulence of an RNA virus.

Authors:  Adam S Lauring; Ashley Acevedo; Samantha B Cooper; Raul Andino
Journal:  Cell Host Microbe       Date:  2012-11-15       Impact factor: 21.023

5.  Identification of two functionally redundant RNA elements in the coding sequence of poliovirus using computer-generated design.

Authors:  Yutong Song; Ying Liu; Charles B Ward; Steffen Mueller; Bruce Futcher; Steven Skiena; Aniko V Paul; Eckard Wimmer
Journal:  Proc Natl Acad Sci U S A       Date:  2012-08-10       Impact factor: 11.205

6.  Generation of an infectious Negev virus cDNA clone.

Authors:  Rodion V Gorchakov; Robert B Tesh; Scott C Weaver; Farooq Nasar
Journal:  J Gen Virol       Date:  2014-05-30       Impact factor: 3.891

7.  Construction of a synthetic infectious cDNA clone of Grapevine Algerian latent virus (GALV-Nf) and its biological activity in Nicotiana benthamiana and grapevine plants.

Authors:  Arianna Lovato; Franco Faoro; Giorgio Gambino; Dario Maffi; Marcella Bracale; Annalisa Polverari; Luca Santi
Journal:  Virol J       Date:  2014-11-03       Impact factor: 4.099

8.  CodonShuffle: a tool for generating and analyzing synonymously mutated sequences.

Authors:  Daniel Macedo de Melo Jorge; Ryan E Mills; Adam S Lauring
Journal:  Virus Evol       Date:  2015-10-02

9.  Pandemic influenza A virus codon usage revisited: biases, adaptation and implications for vaccine strain development.

Authors:  Natalia Goñi; Andrés Iriarte; Victoria Comas; Martín Soñora; Pilar Moreno; Gonzalo Moratorio; Héctor Musto; Juan Cristina
Journal:  Virol J       Date:  2012-11-08       Impact factor: 4.099

10.  Proof by synthesis of Tobacco mosaic virus.

Authors:  Bret Cooper
Journal:  Genome Biol       Date:  2014-04-30       Impact factor: 13.583

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