Literature DB >> 21754911

(E,E,E,E)-2,3,5,6-Tetra-kis{2-[4-(dimethyl-amino)-phen-yl]ethen-yl}pyrazine.

Volker Schmitt1, Dieter Schollmeyer, Heiner Detert.   

Abstract

In the title compound, C(44)H(48)N(6), the essentially planar mol-ecule [maximum deviation from the mean plane of the π system of 0.271 (3) Å] is located on a crystallographic centre of inversion. The almost planar (angle sums at N atoms = 357.6 and 357.1°) dimethyl-amino groups and short C-N bonds of the aniline groups [both 1.379 (4) Å] indicate strong electronic coupling between these groups and the central pyrazine ring.

Entities:  

Year:  2011        PMID: 21754911      PMCID: PMC3120474          DOI: 10.1107/S1600536811019714

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For similar tetra­styryl­pyrazines prepared by acid- or base-catalysed condensations, see: Takahashi & Satake (1952 ▶). For photochemical properties of tetra­styryl­pyrazines, see: Collette & Harper (2003 ▶); Rumi et al. (2008 ▶) For star-shaped chromo­phores, see: Detert et al. (2010 ▶); Detert & Sugiono (2005 ▶); Strehmel et al. (2003 ▶); Nemkovich et al. (2010 ▶). For a two-dimensional homologue of the linear distyryl­pyrazine, see: Fischer et al. (2011 ▶). For cruciforms with a central benzene ring and phenyl­ene­vinyl­ene arms, see: Niazimbetova et al. (2002 ▶), Hauck et al. (2007 ▶), Zucchero et al. (2010 ▶). For probes for thrombine detection, see: Yan et al. (2011 ▶).

Experimental

Crystal data

C44H48N6 M = 660.88 Monoclinic, a = 10.763 (2) Å b = 16.6751 (19) Å c = 10.755 (3) Å β = 101.109 (9)° V = 1894.1 (7) Å3 Z = 2 Cu Kα radiation μ = 0.53 mm−1 T = 193 K 0.30 × 0.20 × 0.10 mm

Data collection

Enraf–Nonius CAD-4 diffractometer 3778 measured reflections 3584 independent reflections 2384 reflections with I > 2σ(I) R int = 0.073 3 standard reflections every 60 min intensity decay: 2%

Refinement

R[F 2 > 2σ(F 2)] = 0.081 wR(F 2) = 0.239 S = 1.11 3584 reflections 230 parameters H-atom parameters constrained Δρmax = 0.44 e Å−3 Δρmin = −0.31 e Å−3 Data collection: CAD-4 Software (Enraf–Nonius, 1989 ▶); cell refinement: CAD-4 Software; data reduction: CORINC (Dräger & Gattow, 1971 ▶); program(s) used to solve structure: SIR97 (Altomare et al., 1999 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: PLATON (Spek, 2009 ▶); software used to prepare material for publication: PLATON. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536811019714/bt5556sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536811019714/bt5556Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536811019714/bt5556Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C44H48N6F(000) = 708
Mr = 660.88Dx = 1.159 Mg m3
Monoclinic, P21/cCu Kα radiation, λ = 1.54178 Å
Hall symbol: -P 2ybcCell parameters from 3 reflections
a = 10.763 (2) Åθ = 36–47°
b = 16.6751 (19) ŵ = 0.53 mm1
c = 10.755 (3) ÅT = 193 K
β = 101.109 (9)°Needle, red
V = 1894.1 (7) Å30.30 × 0.20 × 0.10 mm
Z = 2
Enraf–Nonius CAD-4 diffractometerRint = 0.073
Radiation source: rotating anodeθmax = 69.9°, θmin = 4.2°
graphiteh = 0→13
ω/2θ scansk = 0→20
3778 measured reflectionsl = −13→12
3584 independent reflections3 standard reflections every 60 min
2384 reflections with I > 2σ(I) intensity decay: 2%
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.081Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.239H-atom parameters constrained
S = 1.11w = 1/[σ2(Fo2) + (0.1104P)2 + 0.8327P] where P = (Fo2 + 2Fc2)/3
3584 reflections(Δ/σ)max < 0.001
230 parametersΔρmax = 0.44 e Å3
0 restraintsΔρmin = −0.31 e Å3
Experimental. 1H-NMR (CDCl3, 400 MHz): δ (ppm) = 7.88 (d, 3J = 15.4 Hz, 4H, 2-H ethenyl), 7.58 (d, 3J = 8.8 Hz, 8H, 2-H, 6-H phenyl), 7.38 (d, 3J = 15.4 Hz, 4H, 1-H ethenyl), 6.75 (d, 3J = 8.8 Hz, 8H, 3-H, 6-H phenyl), 3.03 (s, 24H, CH3). 13C-NMR (CDCl3, 75 MHz): δ (ppm) = 150.5 (C-4 phenyl), 144.8 (C-2, C-3, C-4, C-5 pyrazine), 134.8 (C-2 ethenyl), 128.6 (C-3, C-5 phenyl), 125.7 (C-1 phenyl), 118.5 (C-1 ethenyl), 112.2 (C-2, C-6 phenyl), 40.4 (CH3). FD-MS: m/z (g/mol) = 220.1 (1.3 %) [M3+], 330.2 (10.8 %) [M2+], 660.2 (100 %) [M+]. IR (ATR): ν = 2852, 1595, 1519, 1430, 1356, 1322, 1153, 965, 946, 799 cm-1. UV-Vis (CH2Cl2): λmax = 448 nm, ε = 41446 cm2/mmol. Fluorescence (CH2Cl2): λmax = 580 nm. HR-ESI-MS (g/mol): Calcd. for C44H48N6: 660.3940, found: 660.3915.
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
N10.4285 (2)0.53184 (16)0.5798 (2)0.0526 (7)
C20.4847 (3)0.57967 (17)0.5085 (3)0.0504 (7)
C30.4652 (3)0.66661 (19)0.5238 (3)0.0550 (8)
H30.50450.70230.47440.066*
C40.3983 (3)0.69750 (19)0.5996 (3)0.0546 (8)
H40.36250.66020.64940.066*
C50.3701 (3)0.78186 (17)0.6194 (3)0.0476 (7)
C60.2997 (3)0.80216 (18)0.7090 (3)0.0519 (8)
H60.27130.76040.75680.062*
C70.2687 (3)0.87950 (19)0.7326 (3)0.0524 (8)
H70.21960.89010.79530.063*
C80.3084 (3)0.94316 (17)0.6651 (3)0.0498 (7)
C90.3792 (3)0.92395 (18)0.5729 (3)0.0548 (8)
H90.40750.96560.52480.066*
C100.4085 (3)0.84511 (18)0.5509 (3)0.0504 (7)
H100.45610.83370.48730.060*
N110.2801 (3)1.02172 (16)0.6882 (3)0.0671 (8)
C120.3545 (4)1.08608 (19)0.6484 (4)0.0746 (11)
H12A0.44421.07760.68460.112*
H12B0.32701.13750.67790.112*
H12C0.34241.08660.55570.112*
C130.2042 (3)1.0400 (2)0.7805 (4)0.0731 (11)
H13A0.12761.00680.76490.110*
H13B0.18041.09680.77420.110*
H13C0.25281.02890.86560.110*
C140.4417 (3)0.45242 (19)0.5724 (3)0.0506 (7)
C150.3762 (3)0.40327 (19)0.6534 (3)0.0556 (8)
H150.39380.34740.65850.067*
C160.2959 (3)0.4313 (2)0.7183 (3)0.0564 (8)
H160.28030.48740.71160.068*
C170.2262 (3)0.38681 (18)0.8010 (3)0.0490 (7)
C180.1360 (3)0.4262 (2)0.8539 (3)0.0553 (8)
H180.12270.48180.83700.066*
C190.0648 (3)0.3888 (2)0.9297 (3)0.0595 (8)
H190.00290.41840.96250.071*
C200.0826 (3)0.3074 (2)0.9590 (3)0.0596 (9)
C210.1750 (3)0.2668 (2)0.9072 (3)0.0590 (8)
H210.18970.21140.92530.071*
C220.2444 (3)0.30536 (19)0.8310 (3)0.0546 (8)
H220.30640.27610.79770.065*
N230.0169 (3)0.2693 (2)1.0401 (4)0.0948 (12)
C240.0001 (5)0.1823 (3)1.0311 (5)0.1053 (17)
H24A−0.04890.16830.94740.158*
H24B−0.04520.16401.09670.158*
H24C0.08310.15621.04330.158*
C25−0.0672 (4)0.3125 (3)1.1036 (4)0.0988 (16)
H25A−0.02530.36121.14160.148*
H25B−0.09040.27871.17020.148*
H25C−0.14380.32711.04260.148*
U11U22U33U12U13U23
N10.0507 (14)0.0585 (16)0.0480 (14)−0.0022 (12)0.0079 (12)−0.0034 (12)
C20.0549 (17)0.0391 (16)0.0507 (17)−0.0038 (13)−0.0061 (14)0.0016 (13)
C30.0572 (18)0.0496 (18)0.0590 (19)−0.0042 (14)0.0131 (15)0.0023 (15)
C40.0517 (17)0.0487 (18)0.0616 (19)0.0010 (13)0.0068 (15)−0.0002 (15)
C50.0466 (15)0.0420 (15)0.0532 (17)−0.0028 (12)0.0071 (13)−0.0003 (13)
C60.0524 (17)0.0450 (17)0.0604 (19)−0.0010 (13)0.0163 (15)0.0080 (14)
C70.0548 (17)0.0517 (17)0.0539 (18)0.0016 (14)0.0189 (14)−0.0023 (14)
C80.0513 (17)0.0402 (16)0.0555 (17)0.0021 (13)0.0045 (14)−0.0014 (13)
C90.0589 (18)0.0446 (17)0.0617 (19)−0.0071 (14)0.0134 (15)0.0078 (14)
C100.0514 (17)0.0476 (17)0.0551 (18)−0.0031 (13)0.0179 (14)−0.0038 (14)
N110.081 (2)0.0423 (15)0.078 (2)0.0051 (13)0.0160 (17)−0.0054 (14)
C120.097 (3)0.0389 (18)0.079 (2)−0.0035 (17)−0.006 (2)0.0002 (16)
C130.068 (2)0.063 (2)0.083 (3)0.0145 (17)0.002 (2)−0.0182 (19)
C140.0511 (16)0.0507 (18)0.0476 (16)−0.0105 (13)0.0033 (13)0.0066 (14)
C150.0636 (19)0.0481 (17)0.0553 (18)−0.0025 (15)0.0119 (15)0.0016 (14)
C160.0555 (18)0.0558 (19)0.0569 (19)−0.0053 (15)0.0086 (15)−0.0011 (15)
C170.0479 (16)0.0498 (17)0.0484 (16)−0.0038 (13)0.0071 (13)−0.0003 (13)
C180.0544 (18)0.0520 (18)0.0596 (19)0.0074 (14)0.0112 (15)0.0000 (15)
C190.0494 (17)0.071 (2)0.061 (2)0.0080 (15)0.0173 (15)−0.0014 (17)
C200.0519 (18)0.073 (2)0.0561 (19)−0.0061 (16)0.0153 (15)0.0104 (17)
C210.067 (2)0.0506 (18)0.061 (2)−0.0041 (15)0.0174 (17)0.0063 (15)
C220.0586 (18)0.0529 (18)0.0558 (18)0.0003 (14)0.0200 (15)−0.0054 (14)
N230.089 (2)0.107 (3)0.101 (3)−0.005 (2)0.049 (2)0.031 (2)
C240.091 (3)0.110 (4)0.114 (4)−0.020 (3)0.019 (3)0.057 (3)
C250.062 (2)0.168 (5)0.074 (3)−0.008 (3)0.031 (2)0.013 (3)
N1—C21.330 (4)C13—H13C0.9800
N1—C141.336 (4)C14—C2i1.392 (4)
C2—C14i1.392 (4)C14—C151.471 (4)
C2—C31.479 (4)C15—C161.299 (4)
C3—C41.294 (4)C15—H150.9500
C3—H30.9500C16—C171.470 (4)
C4—C51.463 (4)C16—H160.9500
C4—H40.9500C17—C181.382 (4)
C5—C61.379 (4)C17—C221.401 (4)
C5—C101.393 (4)C18—C191.371 (4)
C6—C71.368 (4)C18—H180.9500
C6—H60.9500C19—C201.398 (5)
C7—C81.399 (4)C19—H190.9500
C7—H70.9500C20—N231.379 (4)
C8—N111.379 (4)C20—C211.404 (5)
C8—C91.399 (4)C21—C221.371 (4)
C9—C101.383 (4)C21—H210.9500
C9—H90.9500C22—H220.9500
C10—H100.9500N23—C251.430 (6)
N11—C131.434 (5)N23—C241.463 (6)
N11—C121.452 (4)C24—H24A0.9800
C12—H12A0.9800C24—H24B0.9800
C12—H12B0.9800C24—H24C0.9800
C12—H12C0.9800C25—H25A0.9800
C13—H13A0.9800C25—H25B0.9800
C13—H13B0.9800C25—H25C0.9800
C2—N1—C14119.6 (3)N1—C14—C2i119.9 (3)
N1—C2—C14i120.5 (3)N1—C14—C15116.7 (3)
N1—C2—C3115.7 (3)C2i—C14—C15123.5 (3)
C14i—C2—C3123.8 (3)C16—C15—C14124.2 (3)
C4—C3—C2124.6 (3)C16—C15—H15117.9
C4—C3—H3117.7C14—C15—H15117.9
C2—C3—H3117.7C15—C16—C17127.9 (3)
C3—C4—C5129.1 (3)C15—C16—H16116.1
C3—C4—H4115.5C17—C16—H16116.1
C5—C4—H4115.5C18—C17—C22116.4 (3)
C6—C5—C10116.2 (3)C18—C17—C16119.3 (3)
C6—C5—C4119.7 (3)C22—C17—C16124.3 (3)
C10—C5—C4124.1 (3)C19—C18—C17123.0 (3)
C7—C6—C5123.2 (3)C19—C18—H18118.5
C7—C6—H6118.4C17—C18—H18118.5
C5—C6—H6118.4C18—C19—C20120.5 (3)
C6—C7—C8120.6 (3)C18—C19—H19119.7
C6—C7—H7119.7C20—C19—H19119.7
C8—C7—H7119.7N23—C20—C19121.7 (3)
N11—C8—C9121.0 (3)N23—C20—C21121.2 (3)
N11—C8—C7121.8 (3)C19—C20—C21117.1 (3)
C9—C8—C7117.2 (3)C22—C21—C20121.3 (3)
C10—C9—C8120.8 (3)C22—C21—H21119.3
C10—C9—H9119.6C20—C21—H21119.3
C8—C9—H9119.6C21—C22—C17121.6 (3)
C9—C10—C5122.0 (3)C21—C22—H22119.2
C9—C10—H10119.0C17—C22—H22119.2
C5—C10—H10119.0C20—N23—C25121.3 (4)
C8—N11—C13120.2 (3)C20—N23—C24119.2 (4)
C8—N11—C12119.7 (3)C25—N23—C24116.7 (4)
C13—N11—C12117.8 (3)N23—C24—H24A109.5
N11—C12—H12A109.5N23—C24—H24B109.5
N11—C12—H12B109.5H24A—C24—H24B109.5
H12A—C12—H12B109.5N23—C24—H24C109.5
N11—C12—H12C109.5H24A—C24—H24C109.5
H12A—C12—H12C109.5H24B—C24—H24C109.5
H12B—C12—H12C109.5N23—C25—H25A109.5
N11—C13—H13A109.5N23—C25—H25B109.5
N11—C13—H13B109.5H25A—C25—H25B109.5
H13A—C13—H13B109.5N23—C25—H25C109.5
N11—C13—H13C109.5H25A—C25—H25C109.5
H13A—C13—H13C109.5H25B—C25—H25C109.5
H13B—C13—H13C109.5
C14—N1—C2—C14i−0.8 (5)C2—N1—C14—C2i0.7 (5)
C14—N1—C2—C3−179.7 (3)C2—N1—C14—C15−179.6 (3)
N1—C2—C3—C4−0.3 (5)N1—C14—C15—C168.6 (5)
C14i—C2—C3—C4−179.2 (3)C2i—C14—C15—C16−171.8 (3)
C2—C3—C4—C5−178.2 (3)C14—C15—C16—C17179.9 (3)
C3—C4—C5—C6−177.7 (3)C15—C16—C17—C18−174.4 (3)
C3—C4—C5—C103.4 (5)C15—C16—C17—C225.5 (5)
C10—C5—C6—C7−0.6 (5)C22—C17—C18—C19−1.4 (5)
C4—C5—C6—C7−179.5 (3)C16—C17—C18—C19178.5 (3)
C5—C6—C7—C8−0.2 (5)C17—C18—C19—C201.1 (5)
C6—C7—C8—N11−179.0 (3)C18—C19—C20—N23176.6 (3)
C6—C7—C8—C90.6 (4)C18—C19—C20—C21−0.3 (5)
N11—C8—C9—C10179.3 (3)N23—C20—C21—C22−177.1 (3)
C7—C8—C9—C10−0.3 (5)C19—C20—C21—C22−0.2 (5)
C8—C9—C10—C5−0.5 (5)C20—C21—C22—C17−0.2 (5)
C6—C5—C10—C90.9 (4)C18—C17—C22—C210.9 (5)
C4—C5—C10—C9179.8 (3)C16—C17—C22—C21−178.9 (3)
C9—C8—N11—C13178.2 (3)C19—C20—N23—C25−3.6 (6)
C7—C8—N11—C13−2.2 (5)C21—C20—N23—C25173.2 (4)
C9—C8—N11—C12−19.6 (5)C19—C20—N23—C24156.6 (4)
C7—C8—N11—C12160.1 (3)C21—C20—N23—C24−26.6 (6)
  7 in total

1.  The influence of sigma and pi acceptors on two-photon absorption and solvatochromism of dipolar and quadrupolar unsaturated organic compounds.

Authors:  Bernd Strehmel; Ananda M Sarker; Heiner Detert
Journal:  Chemphyschem       Date:  2003-03-17       Impact factor: 3.102

2.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

3.  Aptamer-based turn-on fluorescent four-branched quaternary ammonium pyrazine probe for selective thrombin detection.

Authors:  Shengyong Yan; Rong Huang; Yangyang Zhou; Ming Zhang; Minggang Deng; Xiaolin Wang; Xiaocheng Weng; Xiang Zhou
Journal:  Chem Commun (Camb)       Date:  2010-11-22       Impact factor: 6.222

4.  Cross-conjugated cruciform fluorophores.

Authors:  Anthony J Zucchero; Psaras L McGrier; Uwe H F Bunz
Journal:  Acc Chem Res       Date:  2010-03-16       Impact factor: 22.384

5.  Phenothiazine cruciforms: synthesis and metallochromic properties.

Authors:  Martina Hauck; Jan Schönhaber; Anthony J Zucchero; Kenneth I Hardcastle; Thomas J J Müller; Uwe H F Bunz
Journal:  J Org Chem       Date:  2007-08-10       Impact factor: 4.354

6.  Monoclinic polymorph of 2,5-bis[4-(dimethyl-amino)-styr-yl]-3,6-dimethyl-pyrazine.

Authors:  Janina Fischer; Volker Schmitt; Dieter Schollmeyer; Heiner Detert
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-03-12

7.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
  7 in total
  2 in total

1.  On the evolutionary significance of the size and planarity of the proline ring.

Authors:  Jörn Behre; Roland Voigt; Ingo Althöfer; Stefan Schuster
Journal:  Naturwissenschaften       Date:  2012-09-15

2.  3,7,11-Tris{4-[(1R,3S,4S)-neomenth-yl-oxy]phen-yl}tri[1,2,4]triazolo[4,3-a:4',3'-c:4'',3''-e][1,3,5]triazine-chloro-form-ethanol (1/1/1).

Authors:  Karoline Herget; Dieter Schollmeyer; Heiner Detert
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2013-02-09
  2 in total

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