| Literature DB >> 21754901 |
Augusto Rivera, Diego Quiroga, Jaime Ríos-Motta, Michal Dušek, Karla Fejfarová.
Abstract
In the crystal structure of the title compound, C(21)H(24)F(2)N(2)O(2), the two N atoms of the imidazolidine moiety are linked to the hy-droxy groups by intra-molecular O-H⋯N hydrogen-bonding inter-actions. The crystal studied was a racemic mixture of RR and SS enatiomers. The cyclo-hexane ring adopts a chair conformation and the imidazolidine group to which it is fused has a twisted envelope conformation.Entities:
Year: 2011 PMID: 21754901 PMCID: PMC3120376 DOI: 10.1107/S1600536811019763
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C21H24F2N2O2 | |
| Triclinic, | |
| Hall symbol: -P 1 | Melting point: 445 K |
| Cu | |
| Cell parameters from 8506 reflections | |
| θ = 3.3–67° | |
| α = 108.053 (3)° | µ = 0.84 mm−1 |
| β = 91.319 (2)° | |
| γ = 97.437 (2)° | Prism, colourless |
| 0.36 × 0.23 × 0.09 mm |
| Oxford Diffraction Xcalibur diffractometer with an Atlas (Gemini ultra Cu) detector | 3248 independent reflections |
| Radiation source: Enhance Ultra (Cu) X-ray Source | 2819 reflections with |
| mirror | |
| Detector resolution: 10.3784 pixels mm-1 | θmax = 67.1°, θmin = 3.3° |
| Rotation method data acquisition using ω scans | |
| Absorption correction: multi-scan ( | |
| 15846 measured reflections |
| Refinement on | 90 constraints |
| H atoms treated by a mixture of independent and constrained refinement | |
| Weighting scheme based on measured s.u.'s | |
| (Δ/σ)max = 0.006 | |
| 3248 reflections | Δρmax = 0.25 e Å−3 |
| 250 parameters | Δρmin = −0.23 e Å−3 |
| 0 restraints |
| Experimental. CrysAlisPro, Oxford Diffraction (2009), Empirical absorption correction using spherical harmonics, implemented in SCALE3 ABSPACK scaling algorithm. |
| Refinement. The refinement was carried out against all reflections. The conventional
|
| F1 | 0.8539 (2) | 0.55112 (8) | 0.62051 (7) | 0.0546 (4) | |
| F2 | −0.07887 (18) | 0.52089 (7) | 0.14954 (7) | 0.0466 (4) | |
| O1 | 0.16405 (19) | 0.16846 (9) | 0.53377 (8) | 0.0378 (4) | |
| O2 | 0.43069 (19) | 0.15534 (9) | 0.05535 (8) | 0.0355 (4) | |
| N1 | 0.3641 (2) | 0.10643 (9) | 0.35698 (7) | 0.0241 (4) | |
| N2 | 0.1999 (2) | 0.09975 (9) | 0.20184 (7) | 0.0239 (4) | |
| C1 | 0.3018 (2) | 0.17945 (11) | 0.29872 (9) | 0.0268 (4) | |
| C2 | 0.3651 (2) | −0.00695 (11) | 0.28492 (9) | 0.0240 (4) | |
| C3 | 0.1458 (2) | −0.01205 (11) | 0.21678 (9) | 0.0239 (4) | |
| C4 | 0.1213 (3) | −0.11590 (11) | 0.12581 (10) | 0.0311 (5) | |
| C5 | 0.0996 (3) | −0.22171 (12) | 0.15961 (11) | 0.0358 (5) | |
| C6 | 0.3115 (3) | −0.21688 (12) | 0.23326 (11) | 0.0367 (5) | |
| C7 | 0.3397 (3) | −0.10836 (12) | 0.32279 (10) | 0.0312 (5) | |
| C8 | 0.5907 (2) | 0.15502 (11) | 0.42136 (9) | 0.0270 (4) | |
| C9 | 0.5514 (2) | 0.26236 (12) | 0.50104 (9) | 0.0267 (4) | |
| C10 | 0.3397 (3) | 0.26295 (12) | 0.55485 (10) | 0.0298 (5) | |
| C11 | 0.3077 (3) | 0.35923 (13) | 0.63185 (10) | 0.0375 (5) | |
| C12 | 0.4816 (3) | 0.45585 (13) | 0.65482 (11) | 0.0404 (5) | |
| C13 | 0.6831 (3) | 0.45507 (13) | 0.59942 (11) | 0.0374 (5) | |
| C14 | 0.7225 (3) | 0.36067 (12) | 0.52322 (10) | 0.0316 (5) | |
| C15 | −0.0045 (2) | 0.13892 (11) | 0.15950 (9) | 0.0262 (4) | |
| C16 | 0.0880 (2) | 0.24381 (11) | 0.13227 (9) | 0.0244 (4) | |
| C17 | 0.3020 (3) | 0.24648 (12) | 0.08027 (9) | 0.0279 (4) | |
| C18 | 0.3842 (3) | 0.34067 (13) | 0.05171 (10) | 0.0343 (5) | |
| C19 | 0.2565 (3) | 0.43379 (13) | 0.07452 (11) | 0.0363 (5) | |
| C20 | 0.0492 (3) | 0.43006 (12) | 0.12624 (10) | 0.0327 (5) | |
| C21 | −0.0371 (3) | 0.33780 (11) | 0.15580 (9) | 0.0282 (5) | |
| H1a | 0.449729 | 0.225399 | 0.290412 | 0.0321* | |
| H1b | 0.177063 | 0.223466 | 0.329659 | 0.0321* | |
| H2 | 0.522627 | −0.013546 | 0.256934 | 0.0288* | |
| H3 | −0.014925 | −0.022658 | 0.241089 | 0.0287* | |
| H4a | 0.266114 | −0.112776 | 0.089503 | 0.0374* | |
| H4b | −0.02548 | −0.118546 | 0.086507 | 0.0374* | |
| H5a | 0.095707 | −0.288587 | 0.103492 | 0.0429* | |
| H5b | −0.055536 | −0.230187 | 0.18856 | 0.0429* | |
| H6a | 0.463729 | −0.221271 | 0.200974 | 0.0441* | |
| H6b | 0.284387 | −0.282712 | 0.254988 | 0.0441* | |
| H7a | 0.194886 | −0.108455 | 0.359483 | 0.0375* | |
| H7b | 0.486083 | −0.104889 | 0.362647 | 0.0375* | |
| H8a | 0.723214 | 0.172323 | 0.383113 | 0.0324* | |
| H8b | 0.635885 | 0.100296 | 0.450802 | 0.0324* | |
| H11 | 0.164157 | 0.358531 | 0.669188 | 0.0449* | |
| H12 | 0.461937 | 0.522264 | 0.708518 | 0.0484* | |
| H14 | 0.86615 | 0.362995 | 0.486129 | 0.0379* | |
| H15a | −0.127904 | 0.156161 | 0.206435 | 0.0315* | |
| H15b | −0.078638 | 0.079531 | 0.101919 | 0.0315* | |
| H18 | 0.530423 | 0.341557 | 0.015894 | 0.0411* | |
| H19 | 0.311842 | 0.49916 | 0.054586 | 0.0435* | |
| H21 | −0.182407 | 0.338481 | 0.192316 | 0.0338* | |
| H1o | 0.188 (4) | 0.1244 (17) | 0.4743 (16) | 0.0566* | |
| H2o | 0.388 (4) | 0.1166 (17) | 0.0919 (14) | 0.0533* |
| F1 | 0.0699 (7) | 0.0323 (5) | 0.0487 (5) | −0.0063 (5) | −0.0012 (5) | 0.0002 (4) |
| F2 | 0.0580 (6) | 0.0287 (5) | 0.0574 (6) | 0.0137 (4) | 0.0065 (4) | 0.0169 (4) |
| O1 | 0.0320 (6) | 0.0477 (6) | 0.0311 (5) | 0.0010 (5) | 0.0061 (4) | 0.0104 (5) |
| O2 | 0.0357 (6) | 0.0400 (6) | 0.0377 (6) | 0.0126 (5) | 0.0115 (4) | 0.0187 (5) |
| N1 | 0.0253 (6) | 0.0246 (6) | 0.0216 (5) | 0.0030 (4) | −0.0016 (4) | 0.0067 (4) |
| N2 | 0.0263 (6) | 0.0227 (5) | 0.0227 (5) | 0.0023 (4) | −0.0016 (4) | 0.0079 (4) |
| C1 | 0.0307 (7) | 0.0248 (6) | 0.0243 (6) | 0.0026 (5) | −0.0018 (5) | 0.0077 (5) |
| C2 | 0.0243 (7) | 0.0240 (7) | 0.0236 (6) | 0.0034 (5) | 0.0025 (5) | 0.0072 (5) |
| C3 | 0.0237 (7) | 0.0244 (6) | 0.0244 (6) | 0.0018 (5) | 0.0020 (5) | 0.0095 (5) |
| C4 | 0.0357 (8) | 0.0267 (7) | 0.0279 (7) | 0.0034 (6) | −0.0030 (6) | 0.0051 (5) |
| C5 | 0.0387 (8) | 0.0245 (7) | 0.0404 (8) | 0.0016 (6) | −0.0034 (6) | 0.0065 (6) |
| C6 | 0.0394 (8) | 0.0248 (7) | 0.0470 (9) | 0.0048 (6) | −0.0028 (7) | 0.0130 (6) |
| C7 | 0.0327 (8) | 0.0297 (7) | 0.0344 (7) | 0.0031 (6) | −0.0031 (6) | 0.0155 (6) |
| C8 | 0.0249 (7) | 0.0313 (7) | 0.0230 (6) | 0.0037 (6) | −0.0011 (5) | 0.0063 (5) |
| C9 | 0.0278 (7) | 0.0305 (7) | 0.0212 (6) | 0.0063 (5) | −0.0023 (5) | 0.0068 (5) |
| C10 | 0.0287 (7) | 0.0364 (8) | 0.0255 (6) | 0.0070 (6) | −0.0009 (5) | 0.0106 (6) |
| C11 | 0.0373 (8) | 0.0492 (9) | 0.0266 (7) | 0.0171 (7) | 0.0046 (6) | 0.0085 (6) |
| C12 | 0.0507 (10) | 0.0369 (8) | 0.0306 (7) | 0.0187 (7) | −0.0013 (7) | 0.0018 (6) |
| C13 | 0.0448 (9) | 0.0291 (7) | 0.0339 (7) | 0.0023 (6) | −0.0048 (6) | 0.0056 (6) |
| C14 | 0.0330 (8) | 0.0332 (7) | 0.0266 (7) | 0.0040 (6) | −0.0007 (6) | 0.0072 (6) |
| C15 | 0.0246 (7) | 0.0282 (7) | 0.0273 (6) | 0.0030 (5) | −0.0013 (5) | 0.0114 (5) |
| C16 | 0.0258 (7) | 0.0272 (7) | 0.0197 (6) | 0.0011 (5) | −0.0041 (5) | 0.0080 (5) |
| C17 | 0.0295 (7) | 0.0315 (7) | 0.0234 (6) | 0.0042 (6) | −0.0005 (5) | 0.0099 (5) |
| C18 | 0.0308 (8) | 0.0423 (8) | 0.0331 (7) | 0.0003 (6) | 0.0026 (6) | 0.0189 (6) |
| C19 | 0.0409 (9) | 0.0331 (8) | 0.0377 (8) | −0.0027 (6) | −0.0031 (6) | 0.0188 (6) |
| C20 | 0.0391 (8) | 0.0259 (7) | 0.0329 (7) | 0.0053 (6) | −0.0039 (6) | 0.0094 (6) |
| C21 | 0.0299 (7) | 0.0294 (7) | 0.0252 (6) | 0.0040 (6) | −0.0005 (5) | 0.0088 (5) |
| F1—C13 | 1.3668 (17) | C6—H6b | 0.96 |
| F2—C20 | 1.3654 (18) | C7—H7a | 0.96 |
| O1—C10 | 1.3682 (17) | C7—H7b | 0.96 |
| O1—H1o | 0.88 (2) | C8—C9 | 1.5100 (17) |
| O2—C17 | 1.3706 (18) | C8—H8a | 0.96 |
| O2—H2o | 0.83 (2) | C8—H8b | 0.96 |
| N1—C1 | 1.477 (2) | C9—C10 | 1.4041 (19) |
| N1—C2 | 1.4704 (15) | C9—C14 | 1.3873 (19) |
| N1—C8 | 1.4686 (16) | C10—C11 | 1.3897 (18) |
| N2—C1 | 1.4805 (14) | C11—C12 | 1.380 (2) |
| N2—C3 | 1.4686 (18) | C11—H11 | 0.96 |
| N2—C15 | 1.4652 (19) | C12—C13 | 1.371 (2) |
| C1—H1a | 0.96 | C12—H12 | 0.96 |
| C1—H1b | 0.96 | C13—C14 | 1.3799 (18) |
| C2—C3 | 1.5100 (19) | C14—H14 | 0.96 |
| C2—C7 | 1.515 (2) | C15—C16 | 1.507 (2) |
| C2—H2 | 0.96 | C15—H15a | 0.96 |
| C3—C4 | 1.5151 (16) | C15—H15b | 0.96 |
| C3—H3 | 0.96 | C16—C17 | 1.4032 (19) |
| C4—C5 | 1.532 (2) | C16—C21 | 1.388 (2) |
| C4—H4a | 0.96 | C17—C18 | 1.385 (2) |
| C4—H4b | 0.96 | C18—C19 | 1.388 (2) |
| C5—C6 | 1.531 (2) | C18—H18 | 0.96 |
| C5—H5a | 0.96 | C19—C20 | 1.371 (2) |
| C5—H5b | 0.96 | C19—H19 | 0.96 |
| C6—C7 | 1.5369 (17) | C20—C21 | 1.377 (2) |
| C6—H6a | 0.96 | C21—H21 | 0.96 |
| C10—O1—H1o | 106.9 (13) | H7a—C7—H7b | 111.1929 |
| C17—O2—H2o | 106.8 (14) | N1—C8—C9 | 110.50 (11) |
| C1—N1—C2 | 105.24 (9) | N1—C8—H8a | 109.471 |
| C1—N1—C8 | 112.56 (10) | N1—C8—H8b | 109.471 |
| C2—N1—C8 | 116.09 (11) | C9—C8—H8a | 109.4713 |
| C1—N2—C3 | 105.27 (10) | C9—C8—H8b | 109.4715 |
| C1—N2—C15 | 113.08 (10) | H8a—C8—H8b | 108.4269 |
| C3—N2—C15 | 116.39 (10) | C8—C9—C10 | 119.74 (11) |
| N1—C1—N2 | 105.37 (10) | C8—C9—C14 | 121.22 (12) |
| N1—C1—H1a | 109.4709 | C10—C9—C14 | 119.04 (11) |
| N1—C1—H1b | 109.4714 | O1—C10—C9 | 120.76 (11) |
| N2—C1—H1a | 109.4715 | O1—C10—C11 | 118.91 (13) |
| N2—C1—H1b | 109.4707 | C9—C10—C11 | 120.31 (12) |
| H1a—C1—H1b | 113.2798 | C10—C11—C12 | 120.24 (14) |
| N1—C2—C3 | 100.30 (10) | C10—C11—H11 | 119.8818 |
| N1—C2—C7 | 117.55 (11) | C12—C11—H11 | 119.8816 |
| N1—C2—H2 | 111.2215 | C11—C12—C13 | 118.67 (13) |
| C3—C2—C7 | 111.58 (10) | C11—C12—H12 | 120.6647 |
| C3—C2—H2 | 117.2277 | C13—C12—H12 | 120.6649 |
| C7—C2—H2 | 99.8589 | F1—C13—C12 | 119.05 (12) |
| N2—C3—C2 | 100.48 (9) | F1—C13—C14 | 118.23 (14) |
| N2—C3—C4 | 116.86 (11) | C12—C13—C14 | 122.72 (14) |
| N2—C3—H3 | 111.6886 | C9—C14—C13 | 118.97 (13) |
| C2—C3—C4 | 112.03 (11) | C9—C14—H14 | 120.5126 |
| C2—C3—H3 | 116.5452 | C13—C14—H14 | 120.5134 |
| C4—C3—H3 | 100.0584 | N2—C15—C16 | 110.43 (10) |
| C3—C4—C5 | 107.76 (12) | N2—C15—H15a | 109.4707 |
| C3—C4—H4a | 109.4714 | N2—C15—H15b | 109.4709 |
| C3—C4—H4b | 109.4705 | C16—C15—H15a | 109.4714 |
| C5—C4—H4a | 109.4712 | C16—C15—H15b | 109.4718 |
| C5—C4—H4b | 109.4712 | H15a—C15—H15b | 108.497 |
| H4a—C4—H4b | 111.1273 | C15—C16—C17 | 119.77 (12) |
| C4—C5—C6 | 112.74 (11) | C15—C16—C21 | 121.39 (12) |
| C4—C5—H5a | 109.4709 | C17—C16—C21 | 118.82 (13) |
| C4—C5—H5b | 109.4714 | O2—C17—C16 | 120.69 (13) |
| C6—C5—H5a | 109.4711 | O2—C17—C18 | 118.90 (13) |
| C6—C5—H5b | 109.4715 | C16—C17—C18 | 120.40 (14) |
| H5a—C5—H5b | 105.995 | C17—C18—C19 | 120.43 (14) |
| C5—C6—C7 | 112.66 (13) | C17—C18—H18 | 119.7837 |
| C5—C6—H6a | 109.471 | C19—C18—H18 | 119.7831 |
| C5—C6—H6b | 109.4713 | C18—C19—C20 | 118.30 (15) |
| C7—C6—H6a | 109.4711 | C18—C19—H19 | 120.8492 |
| C7—C6—H6b | 109.4714 | C20—C19—H19 | 120.8486 |
| H6a—C6—H6b | 106.0781 | F2—C20—C19 | 119.22 (14) |
| C2—C7—C6 | 107.69 (12) | F2—C20—C21 | 118.08 (13) |
| C2—C7—H7a | 109.4718 | C19—C20—C21 | 122.70 (14) |
| C2—C7—H7b | 109.4711 | C16—C21—C20 | 119.33 (13) |
| C6—C7—H7a | 109.4711 | C16—C21—H21 | 120.3339 |
| C6—C7—H7b | 109.4711 | C20—C21—H21 | 120.3327 |
| ?—?—?—? | ? |
| H··· | ||||
| O1—H1o···N1 | 0.88 (2) | 1.92 (2) | 2.7105 (15) | 147.6 (19) |
| O1—H1o···C8 | 0.88 (2) | 2.37 (2) | 2.8566 (17) | 115.3 (15) |
| O2—H2o···N2 | 0.83 (2) | 1.95 (2) | 2.6975 (16) | 148 (2) |
| O2—H2o···C15 | 0.83 (2) | 2.39 (2) | 2.8541 (17) | 116.0 (18) |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| O1—H1 | 0.88 (2) | 1.92 (2) | 2.7105 (15) | 147.6 (19) |
| O2—H2 | 0.83 (2) | 1.95 (2) | 2.6975 (16) | 148 (2) |