Literature DB >> 21754853

2-(2-Iodo-phen-yl)-1,2,3,4-tetra-hydro-isoquinoline-1-carbonitrile.

Yanni Ma, Yifang Sun, Feng Zheng, Wenwen Sun, Le Zhou.   

Abstract

In the title compound, C(16)H(13)IN(2), the two benzene rings make a dihedral angle of 67.26 (5)°. The six-membered heterocycle of the tetra-hydro-isoquinoline unit adopts a half-chair conformation. In the crystal, adjacent mol-ecules are linked by pairs of weak inter-molecular C-H⋯N hydrogen bonds, forming inversion dimers. An intra-molecular C-H⋯I close contact is also observed.

Entities:  

Year:  2011        PMID: 21754853      PMCID: PMC3120457          DOI: 10.1107/S1600536811015212

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the synthesis of the title compound, see: Ishii et al. (1985 ▶). For the biological activity of tetra­hydro­isoquinoline derivatives, see: Abe et al. (2005 ▶); Kamal et al. (2011 ▶); Lane et al. (2006 ▶); Liu et al. (2009 ▶); Storch et al. (2002 ▶); Wright et al. (1990 ▶).

Experimental

Crystal data

C16H13IN2 M = 360.18 Monoclinic, a = 11.7607 (12) Å b = 8.4473 (9) Å c = 15.2601 (15) Å β = 107.662 (1)° V = 1444.6 (3) Å3 Z = 4 Mo Kα radiation μ = 2.20 mm−1 T = 296 K 0.42 × 0.32 × 0.26 mm

Data collection

Bruker APEXII CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.458, T max = 0.598 10311 measured reflections 2689 independent reflections 2359 reflections with I > 2σ(I) R int = 0.018

Refinement

R[F 2 > 2σ(F 2)] = 0.035 wR(F 2) = 0.101 S = 1.02 2689 reflections 172 parameters H-atom parameters constrained Δρmax = 1.16 e Å−3 Δρmin = −0.51 e Å−3 Data collection: APEX2 (Bruker, 2004 ▶); cell refinement: SAINT (Bruker, 2004 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536811015212/is2698sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536811015212/is2698Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536811015212/is2698Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C16H13IN2F(000) = 704
Mr = 360.18Dx = 1.656 Mg m3
Monoclinic, P21/nMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ynCell parameters from 5815 reflections
a = 11.7607 (12) Åθ = 2.6–28.1°
b = 8.4473 (9) ŵ = 2.20 mm1
c = 15.2601 (15) ÅT = 296 K
β = 107.662 (1)°Block, colourless
V = 1444.6 (3) Å30.42 × 0.32 × 0.26 mm
Z = 4
Bruker APEXII CCD area-detector diffractometer2689 independent reflections
Radiation source: fine-focus sealed tube2359 reflections with I > 2σ(I)
graphiteRint = 0.018
φ and ω scansθmax = 25.5°, θmin = 2.6°
Absorption correction: multi-scan (SADABS; Sheldrick, 1996)h = −14→14
Tmin = 0.458, Tmax = 0.598k = −10→10
10311 measured reflectionsl = −18→18
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.035Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.101H-atom parameters constrained
S = 1.01w = 1/[σ2(Fo2) + (0.0558P)2 + 2.5461P] where P = (Fo2 + 2Fc2)/3
2689 reflections(Δ/σ)max < 0.001
172 parametersΔρmax = 1.16 e Å3
0 restraintsΔρmin = −0.51 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes)are estimated using the full covariance matrix. The cell e.s.d.'s are takeninto account individually in the estimation of e.s.d.'s in distances, anglesand torsion angles; correlations between e.s.d.'s in cell parameters are onlyused when they are defined by crystal symmetry. An approximate (isotropic)treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C10.1617 (4)1.1100 (5)0.0837 (3)0.0552 (10)
C20.0577 (4)1.1981 (7)0.0437 (5)0.0757 (15)
H20.00561.21770.07780.091*
C30.0307 (5)1.2559 (7)−0.0439 (5)0.0821 (17)
H3−0.03801.3159−0.06820.098*
C40.1052 (5)1.2253 (7)−0.0962 (4)0.0785 (15)
H40.08671.2636−0.15600.094*
C50.2082 (4)1.1369 (6)−0.0589 (3)0.0612 (12)
H50.25941.1170−0.09360.073*
C60.2349 (4)1.0783 (5)0.0296 (3)0.0470 (9)
C70.3478 (4)0.9792 (5)0.0678 (3)0.0412 (8)
H70.35010.90040.02130.049*
C80.3220 (4)1.0020 (6)0.2187 (3)0.0535 (10)
H8A0.37211.09560.22820.064*
H8B0.33590.94880.27740.064*
C90.1920 (5)1.0483 (6)0.1804 (4)0.0655 (13)
H9A0.14260.95680.18150.079*
H9B0.17401.12910.21940.079*
C100.4559 (4)1.0835 (5)0.0839 (3)0.0457 (9)
C110.4559 (3)0.7998 (4)0.1851 (3)0.0417 (8)
C120.4616 (4)0.6511 (5)0.1462 (3)0.0440 (8)
C130.5645 (5)0.5622 (5)0.1734 (4)0.0588 (11)
H130.56770.46510.14540.071*
C140.6628 (4)0.6160 (6)0.2419 (3)0.0622 (12)
H140.73240.55590.25960.075*
C150.6579 (4)0.7576 (6)0.2839 (3)0.0615 (11)
H150.72300.79230.33170.074*
C160.5558 (4)0.8495 (5)0.2549 (3)0.0531 (10)
H160.55390.94690.28290.064*
I10.31094 (3)0.55223 (3)0.05008 (2)0.05981 (15)
N10.3511 (3)0.8951 (4)0.1520 (2)0.0425 (7)
N20.5385 (4)1.1593 (5)0.0987 (3)0.0632 (10)
U11U22U33U12U13U23
C10.051 (2)0.047 (2)0.071 (3)−0.0028 (19)0.024 (2)−0.013 (2)
C20.048 (3)0.070 (3)0.109 (4)0.011 (2)0.025 (3)−0.021 (3)
C30.061 (3)0.072 (4)0.099 (4)0.019 (3)0.004 (3)−0.011 (3)
C40.075 (3)0.070 (3)0.077 (3)0.013 (3)0.003 (3)0.002 (3)
C50.060 (3)0.060 (3)0.061 (3)0.005 (2)0.014 (2)−0.003 (2)
C60.043 (2)0.038 (2)0.059 (2)−0.0019 (16)0.0148 (18)−0.0094 (18)
C70.0452 (19)0.0354 (18)0.047 (2)−0.0025 (16)0.0204 (16)−0.0058 (16)
C80.069 (3)0.049 (2)0.051 (2)0.000 (2)0.031 (2)−0.010 (2)
C90.065 (3)0.066 (3)0.082 (3)0.008 (2)0.046 (3)−0.009 (2)
C100.046 (2)0.042 (2)0.054 (2)0.0030 (18)0.0218 (18)0.0005 (17)
C110.051 (2)0.0360 (19)0.0430 (19)−0.0035 (16)0.0223 (17)0.0000 (15)
C120.053 (2)0.0389 (19)0.046 (2)−0.0035 (17)0.0227 (17)−0.0019 (16)
C130.073 (3)0.042 (2)0.067 (3)0.008 (2)0.030 (2)0.001 (2)
C140.058 (3)0.058 (3)0.069 (3)0.014 (2)0.017 (2)0.012 (2)
C150.057 (3)0.066 (3)0.056 (3)−0.003 (2)0.010 (2)0.007 (2)
C160.062 (3)0.048 (2)0.050 (2)−0.002 (2)0.0191 (19)−0.0051 (19)
I10.0717 (2)0.0453 (2)0.0607 (2)−0.01053 (13)0.01746 (16)−0.01147 (12)
N10.0493 (18)0.0375 (16)0.0474 (17)0.0006 (14)0.0246 (15)−0.0060 (14)
N20.058 (2)0.054 (2)0.082 (3)−0.010 (2)0.028 (2)−0.004 (2)
C1—C61.387 (6)C8—H8A0.9700
C1—C21.403 (7)C8—H8B0.9700
C1—C91.503 (7)C9—H9A0.9700
C2—C31.368 (9)C9—H9B0.9700
C2—H20.9300C10—N21.128 (5)
C3—C41.376 (9)C11—C161.390 (6)
C3—H30.9300C11—C121.400 (5)
C4—C51.390 (7)C11—N11.430 (5)
C4—H40.9300C12—C131.377 (6)
C5—C61.382 (6)C12—I12.100 (4)
C5—H50.9300C13—C141.380 (7)
C6—C71.528 (6)C13—H130.9300
C7—N11.458 (5)C14—C151.367 (7)
C7—C101.505 (6)C14—H140.9300
C7—H70.9800C15—C161.386 (7)
C8—N11.477 (5)C15—H150.9300
C8—C91.513 (7)C16—H160.9300
C6—C1—C2117.4 (5)H8A—C8—H8B108.4
C6—C1—C9120.8 (4)C1—C9—C8112.3 (4)
C2—C1—C9121.7 (4)C1—C9—H9A109.1
C3—C2—C1121.8 (5)C8—C9—H9A109.1
C3—C2—H2119.1C1—C9—H9B109.1
C1—C2—H2119.1C8—C9—H9B109.1
C2—C3—C4120.0 (5)H9A—C9—H9B107.9
C2—C3—H3120.0N2—C10—C7177.7 (5)
C4—C3—H3120.0C16—C11—C12117.3 (4)
C3—C4—C5119.5 (5)C16—C11—N1122.6 (3)
C3—C4—H4120.3C12—C11—N1120.2 (3)
C5—C4—H4120.3C13—C12—C11120.8 (4)
C6—C5—C4120.3 (5)C13—C12—I1118.1 (3)
C6—C5—H5119.9C11—C12—I1120.9 (3)
C4—C5—H5119.9C12—C13—C14120.5 (4)
C5—C6—C1121.0 (4)C12—C13—H13119.8
C5—C6—C7118.8 (4)C14—C13—H13119.8
C1—C6—C7120.2 (4)C15—C14—C13119.9 (4)
N1—C7—C10110.3 (3)C15—C14—H14120.1
N1—C7—C6113.0 (3)C13—C14—H14120.1
C10—C7—C6109.6 (3)C14—C15—C16119.8 (4)
N1—C7—H7107.9C14—C15—H15120.1
C10—C7—H7107.9C16—C15—H15120.1
C6—C7—H7107.9C15—C16—C11121.6 (4)
N1—C8—C9108.0 (4)C15—C16—H16119.2
N1—C8—H8A110.1C11—C16—H16119.2
C9—C8—H8A110.1C11—N1—C7112.0 (3)
N1—C8—H8B110.1C11—N1—C8117.1 (3)
C9—C8—H8B110.1C7—N1—C8111.1 (3)
C6—C1—C2—C3−2.3 (8)C16—C11—C12—I1173.5 (3)
C9—C1—C2—C3179.2 (5)N1—C11—C12—I1−7.4 (5)
C1—C2—C3—C41.4 (9)C11—C12—C13—C142.1 (7)
C2—C3—C4—C5−0.6 (9)I1—C12—C13—C14−174.6 (4)
C3—C4—C5—C60.8 (8)C12—C13—C14—C150.7 (7)
C4—C5—C6—C1−1.8 (7)C13—C14—C15—C16−2.5 (7)
C4—C5—C6—C7179.0 (4)C14—C15—C16—C111.5 (7)
C2—C1—C6—C52.5 (7)C12—C11—C16—C151.3 (6)
C9—C1—C6—C5−179.0 (4)N1—C11—C16—C15−177.8 (4)
C2—C1—C6—C7−178.3 (4)C16—C11—N1—C798.6 (4)
C9—C1—C6—C70.2 (6)C12—C11—N1—C7−80.4 (4)
C5—C6—C7—N1−166.6 (4)C16—C11—N1—C8−31.4 (5)
C1—C6—C7—N114.2 (5)C12—C11—N1—C8149.5 (4)
C5—C6—C7—C1070.0 (5)C10—C7—N1—C11−58.6 (4)
C1—C6—C7—C10−109.2 (4)C6—C7—N1—C11178.4 (3)
C6—C1—C9—C819.0 (6)C10—C7—N1—C874.5 (4)
C2—C1—C9—C8−162.6 (4)C6—C7—N1—C8−48.5 (4)
N1—C8—C9—C1−51.5 (5)C9—C8—N1—C11−161.5 (4)
C16—C11—C12—C13−3.1 (6)C9—C8—N1—C768.1 (4)
N1—C11—C12—C13176.0 (4)
D—H···AD—HH···AD···AD—H···A
C7—H7···N2i0.982.603.418 (5)141
C7—H7···I10.983.033.633 (4)121
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C7—H7⋯N2i0.982.603.418 (5)141
C7—H7⋯I10.983.033.633 (4)121

Symmetry code: (i) .

  7 in total

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Authors:  Jonathan W Lane; Alberto Estevez; Kyle Mortara; Ondine Callan; Jeffrey R Spencer; Robert M Williams
Journal:  Bioorg Med Chem Lett       Date:  2006-05-02       Impact factor: 2.823

2.  Synthesis and biological activity of pyrazolothienotetrahydroisoquinoline and [1,2,4]triazolo[3,4-a]thienotetrahydroisoquinoline derivatives.

Authors:  Adel M Kamal; Shaban M Radwan; Remon M Zaki
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3.  A short history of SHELX.

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Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

4.  Selective dopaminergic neurotoxicity of isoquinoline derivatives related to Parkinson's disease: studies using heterologous expression systems of the dopamine transporter.

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Journal:  Biochem Pharmacol       Date:  2002-03-01       Impact factor: 5.858

Review 5.  Synthesis and neurotoxicity of tetrahydroisoquinoline derivatives for studying Parkinson's disease.

Authors:  Kenji Abe; Toshiaki Saitoh; Yoshie Horiguchi; Iku Utsunomiya; Kyoji Taguchi
Journal:  Biol Pharm Bull       Date:  2005-08       Impact factor: 2.233

6.  Synthesis, structure and antibacterial activity of new 2-(1-(2-(substituted-phenyl)-5-methyloxazol-4-yl)-3-(2-substitued-phenyl)-4,5-dihydro-1H-pyrazol-5-yl)-7-substitued-1,2,3,4-tetrahydroisoquinoline derivatives.

Authors:  Xin-Hua Liu; Jing Zhu; An-na Zhou; Bao-An Song; Hai-Liang Zhu; Lin-Shan Bai; Pinaki S Bhadury; Chun-Xiu Pan
Journal:  Bioorg Med Chem       Date:  2008-12-24       Impact factor: 3.641

7.  Studies on the chemical constituents of rutaceous plants. LX. Development of a versatile method for syntheses of the antitumor benzo[c]phenanthridine alkaloids. (9). Efficient syntheses and antitumor activities of nitidine and related nonphenolic benzo[c]phenanthridine alkaloids.

Authors:  H Ishii; Y Ichikawa; E Kawanabe; M Ishikawa; T Ishikawa; K Kuretani; M Inomata; A Hoshi
Journal:  Chem Pharm Bull (Tokyo)       Date:  1985-10       Impact factor: 1.645

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