Literature DB >> 21754848

5,8-Dimethyl-3-methyl-ene-2-oxo-3,3a,4,5,5a,6,8a,8b-octa-hydro-2H-1-oxa-s-indacene-5-carbaldehyde.

Mohamed Moumou, Ahmed Benharref, Moha Berraho, Jean-Claude Daran, Mohamed Akssira, Ahmed Elhakmaoui.   

Abstract

The title compound, C(15)H(18)O(3), was synthesized from 9α-hy-droxy-parthenolide (9α-hy-droxy-4,8-dimethyl-12-methyl-ene-3,14-dioxatricyclo-[9.3.0.0(2,4)]tetra-dec-7-en-13-one), which was isolated from the chloro-form extract of the aerial parts of Anvillea radiata. The five-membered lactone ring has a twisted conformation, while the six- and five-membered rings display chair and envelope conformations, respectively. The dihedral angle between the two five-membered rings is 50.57 (11)°.

Entities:  

Year:  2011        PMID: 21754848      PMCID: PMC3120451          DOI: 10.1107/S1600536811018344

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the isolation and biological activity of 9α-hy­droxy­parthenolide, see: Abdel Sattar et al. (1996 ▶); El Hassany et al. (2004 ▶). For the reactivity of this sesquiterpene, see: Castaneda-Acosta et al. (1993 ▶); Neukirch et al. (2003 ▶); Der-Ren et al. (2006 ▶); Neelakantan et al. (2009 ▶). For conformational analysis, see: Cremer & Pople (1975 ▶).

Experimental

Crystal data

C15H18O3 M = 246.29 Orthorhombic, a = 9.5293 (3) Å b = 9.7885 (3) Å c = 13.7524 (4) Å V = 1282.79 (7) Å3 Z = 4 Mo Kα radiation μ = 0.09 mm−1 T = 173 K 0.50 × 0.33 × 0.08 mm

Data collection

Bruker APEXII CCD area-detector diffractometer 22932 measured reflections 1517 independent reflections 1403 reflections with I > 2σ(I) R int = 0.026

Refinement

R[F 2 > 2σ(F 2)] = 0.031 wR(F 2) = 0.085 S = 1.09 1517 reflections 165 parameters H-atom parameters constrained Δρmax = 0.18 e Å−3 Δρmin = −0.16 e Å−3 Data collection: APEX2 (Bruker, 2005 ▶); cell refinement: APEX2 and SAINT (Bruker, 2005 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997 ▶); software used to prepare material for publication: WinGX (Farrugia, 1999 ▶). Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536811018344/sj5146sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536811018344/sj5146Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C15H18O3F(000) = 528
Mr = 246.29Dx = 1.275 Mg m3
Orthorhombic, P212121Mo Kα radiation, λ = 0.71073 Å
Hall symbol: P 2ac 2abCell parameters from 22932 reflections
a = 9.5293 (3) Åθ = 2.6–26.4°
b = 9.7885 (3) ŵ = 0.09 mm1
c = 13.7524 (4) ÅT = 173 K
V = 1282.79 (7) Å3Platelet, colourless
Z = 40.50 × 0.33 × 0.08 mm
Bruker APEXII CCD area-detector diffractometer1403 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.026
graphiteθmax = 26.4°, θmin = 2.6°
φ and ω scansh = −9→11
22932 measured reflectionsk = −12→12
1517 independent reflectionsl = −17→17
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.031Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.085H-atom parameters constrained
S = 1.09w = 1/[σ2(Fo2) + (0.0511P)2 + 0.1837P] where P = (Fo2 + 2Fc2)/3
1517 reflections(Δ/σ)max < 0.001
165 parametersΔρmax = 0.18 e Å3
0 restraintsΔρmin = −0.16 e Å3
Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes.
xyzUiso*/Ueq
C2−0.05168 (19)0.3323 (2)0.83535 (13)0.0323 (4)
C3−0.01615 (19)0.47821 (19)0.85677 (12)0.0307 (4)
C3A0.12071 (17)0.47296 (17)0.91013 (12)0.0267 (4)
H30.09960.45730.97900.032*
C40.22933 (18)0.58577 (18)0.90494 (13)0.0301 (4)
H4A0.19030.67010.93030.036*
H4B0.25680.60100.83790.036*
C50.3576 (2)0.54344 (18)0.96536 (13)0.0311 (4)
C5A0.40893 (18)0.39541 (18)0.94628 (13)0.0288 (4)
H5A0.46490.36981.00320.035*
C60.5034 (2)0.3693 (2)0.85704 (15)0.0382 (5)
H6A0.47000.41830.80030.046*
H6B0.60000.39500.86990.046*
C70.4886 (2)0.2173 (2)0.84457 (14)0.0377 (4)
H70.55140.16380.80950.045*
C80.3756 (2)0.16819 (18)0.88923 (12)0.0321 (4)
C8A0.29432 (17)0.28351 (16)0.93605 (11)0.0254 (3)
H8A0.25580.25680.99930.030*
C8B0.18260 (17)0.34167 (17)0.86986 (12)0.0252 (3)
H8B0.22530.36150.80660.030*
C9−0.0975 (2)0.5818 (2)0.83263 (14)0.0386 (4)
H9A−0.18190.56600.80060.046*
H9B−0.07050.67060.84770.046*
C100.3226 (2)0.55169 (19)1.07397 (14)0.0379 (4)
H100.38570.51041.11640.046*
C110.4789 (2)0.6450 (2)0.95088 (17)0.0439 (5)
H11A0.44870.73500.96910.066*
H11B0.50690.64510.88380.066*
H11C0.55700.61840.99070.066*
C120.3260 (2)0.02303 (19)0.89327 (14)0.0401 (5)
H12A0.3250−0.00750.95960.060*
H12B0.3882−0.03370.85600.060*
H12C0.23300.01730.86680.060*
O10.06185 (12)0.25263 (13)0.85447 (9)0.0302 (3)
O2−0.16069 (14)0.28443 (16)0.80758 (11)0.0455 (4)
O30.22305 (18)0.60552 (17)1.10965 (11)0.0531 (4)
U11U22U33U12U13U23
C20.0276 (9)0.0415 (10)0.0279 (8)0.0015 (8)0.0021 (7)−0.0003 (8)
C30.0266 (8)0.0389 (9)0.0266 (8)0.0034 (8)0.0031 (7)0.0002 (7)
C3A0.0255 (8)0.0299 (8)0.0249 (7)0.0042 (7)0.0017 (7)0.0012 (7)
C40.0310 (9)0.0268 (8)0.0324 (8)0.0032 (8)−0.0011 (7)0.0029 (7)
C50.0293 (9)0.0276 (8)0.0363 (9)−0.0007 (8)−0.0049 (7)0.0014 (7)
C5A0.0253 (8)0.0300 (8)0.0311 (8)0.0026 (7)−0.0042 (7)0.0048 (7)
C60.0260 (9)0.0436 (11)0.0450 (10)0.0037 (8)0.0069 (8)0.0072 (9)
C70.0337 (10)0.0403 (10)0.0391 (10)0.0121 (9)0.0021 (8)−0.0002 (8)
C80.0370 (9)0.0315 (8)0.0277 (8)0.0087 (8)−0.0050 (7)0.0024 (7)
C8A0.0284 (8)0.0252 (7)0.0224 (7)0.0017 (7)−0.0006 (6)0.0031 (6)
C8B0.0234 (8)0.0284 (8)0.0238 (7)0.0000 (7)0.0024 (6)0.0013 (6)
C90.0369 (10)0.0447 (10)0.0341 (9)0.0101 (9)−0.0045 (8)0.0023 (8)
C100.0452 (11)0.0324 (9)0.0361 (9)−0.0010 (9)−0.0088 (8)−0.0034 (7)
C110.0363 (10)0.0347 (10)0.0607 (13)−0.0060 (9)−0.0088 (10)0.0054 (9)
C120.0527 (12)0.0303 (9)0.0373 (9)0.0080 (9)−0.0072 (9)−0.0012 (8)
O10.0274 (6)0.0322 (6)0.0310 (6)−0.0012 (5)−0.0001 (5)−0.0018 (5)
O20.0287 (7)0.0547 (9)0.0530 (8)−0.0036 (7)−0.0043 (6)−0.0080 (7)
O30.0599 (10)0.0579 (9)0.0414 (8)0.0095 (9)0.0002 (7)−0.0130 (7)
C2—O21.202 (2)C6—H6B0.9700
C2—O11.360 (2)C7—C81.330 (3)
C2—C31.497 (3)C7—H70.9300
C3—C91.319 (3)C8—C121.499 (3)
C3—C3A1.497 (2)C8—C8A1.513 (2)
C3A—C41.515 (2)C8A—C8B1.512 (2)
C3A—C8B1.519 (2)C8A—H8A0.9800
C3A—H30.9800C8B—O11.459 (2)
C4—C51.535 (2)C8B—H8B0.9800
C4—H4A0.9700C9—H9A0.9300
C4—H4B0.9700C9—H9B0.9300
C5—C101.533 (3)C10—O31.191 (2)
C5—C111.538 (3)C10—H100.9300
C5—C5A1.552 (2)C11—H11A0.9600
C5A—C61.544 (3)C11—H11B0.9600
C5A—C8A1.553 (2)C11—H11C0.9600
C5A—H5A0.9800C12—H12A0.9600
C6—C71.504 (3)C12—H12B0.9600
C6—H6A0.9700C12—H12C0.9600
O2—C2—O1121.68 (18)C8—C7—H7123.8
O2—C2—C3129.07 (18)C6—C7—H7123.8
O1—C2—C3109.23 (15)C7—C8—C12128.02 (18)
C9—C3—C2123.43 (17)C7—C8—C8A109.96 (16)
C9—C3—C3A131.43 (18)C12—C8—C8A122.00 (16)
C2—C3—C3A105.12 (14)C8B—C8A—C8112.67 (13)
C3—C3A—C4123.15 (14)C8B—C8A—C5A106.51 (13)
C3—C3A—C8B100.87 (14)C8—C8A—C5A101.81 (14)
C4—C3A—C8B109.53 (13)C8B—C8A—H8A111.8
C3—C3A—H3107.4C8—C8A—H8A111.8
C4—C3A—H3107.4C5A—C8A—H8A111.8
C8B—C3A—H3107.4O1—C8B—C8A114.69 (13)
C3A—C4—C5108.77 (14)O1—C8B—C3A104.61 (13)
C3A—C4—H4A109.9C8A—C8B—C3A111.88 (13)
C5—C4—H4A109.9O1—C8B—H8B108.5
C3A—C4—H4B109.9C8A—C8B—H8B108.5
C5—C4—H4B109.9C3A—C8B—H8B108.5
H4A—C4—H4B108.3C3—C9—H9A120.0
C10—C5—C4109.89 (16)C3—C9—H9B120.0
C10—C5—C11104.81 (16)H9A—C9—H9B120.0
C4—C5—C11110.74 (15)O3—C10—C5126.73 (19)
C10—C5—C5A106.41 (14)O3—C10—H10116.6
C4—C5—C5A114.30 (15)C5—C10—H10116.6
C11—C5—C5A110.18 (15)C5—C11—H11A109.5
C6—C5A—C5118.22 (15)C5—C11—H11B109.5
C6—C5A—C8A102.79 (14)H11A—C11—H11B109.5
C5—C5A—C8A116.89 (14)C5—C11—H11C109.5
C6—C5A—H5A106.0H11A—C11—H11C109.5
C5—C5A—H5A106.0H11B—C11—H11C109.5
C8A—C5A—H5A106.0C8—C12—H12A109.5
C7—C6—C5A101.51 (16)C8—C12—H12B109.5
C7—C6—H6A111.5H12A—C12—H12B109.5
C5A—C6—H6A111.5C8—C12—H12C109.5
C7—C6—H6B111.5H12A—C12—H12C109.5
C5A—C6—H6B111.5H12B—C12—H12C109.5
H6A—C6—H6B109.3C2—O1—C8B108.23 (13)
C8—C7—C6112.41 (18)
  7 in total

1.  Antitumor germacranolides from Anvillea garcinii.

Authors:  E Abdel Sattar; A M Galal; G S Mossa
Journal:  J Nat Prod       Date:  1996-04       Impact factor: 4.050

2.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

3.  Parthenolide and its photochemically synthesized 1(10)Z isomer: chemical reactivity and structure-activity relationship studies in human leucocyte chemotaxis.

Authors:  Hannes Neukirch; Nicole C Kaneider; Christian J Wiedermann; Antonio Guerriero; Michele D'Ambrosio
Journal:  Bioorg Med Chem       Date:  2003-04-03       Impact factor: 3.641

4.  Synthesis and anti-viral activity of a series of sesquiterpene lactones and analogues in the subgenomic HCV replicon system.

Authors:  Der-Ren Hwang; Yu-Shan Wu; Chun-Wei Chang; Tzu-Wen Lien; Wei-Cheng Chen; Uan-Kang Tan; John T A Hsu; Hsing-Pang Hsieh
Journal:  Bioorg Med Chem       Date:  2005-09-02       Impact factor: 3.641

5.  Biomimetic transformations of parthenolide.

Authors:  J Castañeda-Acosta; N H Fischer; D Vargas
Journal:  J Nat Prod       Date:  1993-01       Impact factor: 4.050

6.  Germacranolides from Anvillea radiata.

Authors:  B El Hassany; F El Hanbali; M Akssira; F Mellouki; A Haidour; A F Barrero
Journal:  Fitoterapia       Date:  2004-09       Impact factor: 2.882

7.  Aminoparthenolides as novel anti-leukemic agents: Discovery of the NF-kappaB inhibitor, DMAPT (LC-1).

Authors:  Sundar Neelakantan; Shama Nasim; Monica L Guzman; Craig T Jordan; Peter A Crooks
Journal:  Bioorg Med Chem Lett       Date:  2009-05-27       Impact factor: 2.823

  7 in total
  1 in total

1.  Comparison of the effects of alcoholic extract of aerial parts of Anvillea garcinii and atorvastatin on the lipid profile and thyroid hormones in hypercholesterolemic rats.

Authors:  Fatemeh Rasekh; Zohre Atashi-Nodoshan; Ali Zarei; Amir Abbas Minaeifar; Saeed Changizi-Ashtiyani; Zahra Afrasyabi
Journal:  Avicenna J Phytomed       Date:  2022 Mar-Apr
  1 in total

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