Literature DB >> 21754692

N,N'-Dibenzyl-N,N'-dimethyl-N''-(methyl-sulfon-yl)phospho-ric triamide.

Mehrdad Pourayoubi, Sepideh Sadeghi Seraji, Giuseppe Bruno, Hadi Amiri Rudbari.   

Abstract

In the title compound, C(17)H(24)N(3)O(3)PS, the P and the S atoms are each in a distorted <span class="Species">tetra-hedral environment and the N atoms display sp(2) character. The phosphoryl group and the NH unit are anti with respect to one another. The dihedral angle between the mean planes of the benzene rings is 31.08 (8)°. The crystal packing is stabilized by N-H⋯O hydrogen bonds, forming an extended chain parallel to the b axis.

Entities:  

Year:  2011        PMID: 21754692      PMCID: PMC3120462          DOI: 10.1107/S1600536811015832

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For phospho­ramidates having a P(O)[N(CH3)(CH2C6H5)]2 moiety, see: Pourayoubi et al. (2010 ▶); Gholivand et al. (2005 ▶). For bond lengths in a <span class="Chemical">sulfonamide compound, see: Ibrahim et al. (2011 ▶) and references cited therein.

Experimental

Crystal data

C17H24N3O3PS M = 381.42 Orthorhombic, a = 8.5343 (4) Å b = 10.1800 (5) Å c = 22.0455 (10) Å V = 1915.29 (16) Å3 Z = 4 Mo Kα radiation μ = 0.27 mm−1 T = 296 K 0.47 × 0.38 × 0.30 mm

Data collection

Bruker APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 2004 ▶) T min = 0.700, T max = 0.746 65627 measured reflections 4155 independent reflections 3937 reflections with I > 2σ(I) R int = 0.060

Refinement

R[F 2 > 2σ(F 2)] = 0.032 wR(F 2) = 0.094 S = 1.08 4155 reflections 226 parameters H-atom parameters constrained Δρmax = 0.30 e Å−3 Δρmin = −0.22 e Å−3 Absolute structure: Flack (1983 ▶), 1769 Friedel pairs Flack parameter: 0.02 (7) Data collection: APEX2 (Bruker, 2005 ▶); cell refinement: SAINT (Bruker, 2005 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: Mercury (Macrae et al., 2008 ▶); software used to prepare material for publication: SHELXTL (Sheldrick, 2008 ▶) and enCIFer (Allen et al., 2004 ▶). Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536811015832/jj2084sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536811015832/jj2084Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C17H24N3O3PSF(000) = 808
Mr = 381.42Dx = 1.323 Mg m3
Orthorhombic, P212121Mo Kα radiation, λ = 0.71073 Å
Hall symbol: P 2ac 2abCell parameters from 9705 reflections
a = 8.5343 (4) Åθ = 2.6–29.5°
b = 10.1800 (5) ŵ = 0.27 mm1
c = 22.0455 (10) ÅT = 296 K
V = 1915.29 (16) Å3Irregular, colourless
Z = 40.47 × 0.38 × 0.30 mm
Bruker APEXII CCD diffractometer4155 independent reflections
Radiation source: fine-focus sealed tube3937 reflections with I > 2σ(I)
graphiteRint = 0.060
φ and ω scansθmax = 27.0°, θmin = 2.2°
Absorption correction: multi-scan (SADABS; Sheldrick, 2004)h = −10→10
Tmin = 0.700, Tmax = 0.746k = −13→13
65627 measured reflectionsl = −28→28
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.032H-atom parameters constrained
wR(F2) = 0.094w = 1/[σ2(Fo2) + (0.0564P)2 + 0.4498P] where P = (Fo2 + 2Fc2)/3
S = 1.08(Δ/σ)max = 0.001
4155 reflectionsΔρmax = 0.30 e Å3
226 parametersΔρmin = −0.22 e Å3
0 restraintsAbsolute structure: Flack (1983), 1769 Friedel pairs
Primary atom site location: structure-invariant direct methodsFlack parameter: 0.02 (7)
Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
S−0.14987 (6)0.66473 (5)0.33606 (2)0.03622 (13)
P0.01450 (6)0.58351 (4)0.22593 (2)0.02755 (11)
O2−0.1835 (2)0.78944 (16)0.36311 (8)0.0531 (5)
O3−0.2779 (2)0.58363 (18)0.31763 (9)0.0548 (4)
O10.0074 (2)0.45080 (12)0.25313 (7)0.0376 (3)
N2−0.1005 (2)0.61222 (17)0.16850 (8)0.0374 (4)
N10.19197 (19)0.61606 (16)0.20271 (8)0.0357 (4)
C16−0.2309 (3)0.7047 (3)0.16690 (14)0.0598 (7)
H16A−0.23670.75060.20490.090*
H16B−0.32680.65770.16010.090*
H16C−0.21490.76660.13460.090*
C11−0.4106 (4)0.2282 (3)0.07992 (17)0.0756 (10)
H11−0.48170.16090.07240.091*
C10−0.3104 (4)0.2678 (3)0.03513 (15)0.0733 (9)
H10−0.31230.2269−0.00260.088*
C9−0.2056 (3)0.3697 (3)0.04626 (12)0.0551 (6)
H9−0.14020.39890.01540.066*
C14−0.1979 (2)0.4282 (2)0.10302 (9)0.0377 (4)
C15−0.0776 (3)0.5341 (2)0.11360 (10)0.0420 (5)
H15A0.02510.49350.11550.050*
H15B−0.07800.59280.07890.050*
C70.2255 (3)0.7384 (2)0.17023 (13)0.0479 (6)
H7A0.27140.80070.19840.058*
H7B0.12770.77530.15580.058*
C60.3355 (2)0.7211 (2)0.11683 (10)0.0370 (4)
C10.4198 (3)0.8292 (2)0.09625 (11)0.0451 (5)
H10.41060.90940.11610.054*
C20.5174 (3)0.8180 (3)0.04622 (12)0.0553 (6)
H20.57290.89070.03240.066*
C30.5322 (3)0.6990 (3)0.01694 (11)0.0621 (7)
H30.59800.6912−0.01650.074*
N3−0.0373 (2)0.69410 (14)0.27825 (7)0.0313 (3)
H−0.00160.77260.27420.038*
C17−0.0341 (4)0.5731 (3)0.38565 (11)0.0583 (7)
H17A0.05360.62510.39860.087*
H17B0.00310.49580.36530.087*
H17C−0.09520.54800.42030.087*
C80.3248 (3)0.5572 (3)0.23501 (12)0.0588 (7)
H8A0.29150.47780.25460.088*
H8B0.36310.61790.26490.088*
H8C0.40690.53750.20670.088*
C50.3510 (3)0.6022 (2)0.08697 (10)0.0448 (5)
H50.29520.52920.10020.054*
C40.4499 (3)0.5922 (3)0.03725 (11)0.0578 (6)
H40.46040.51200.01750.069*
C13−0.2991 (3)0.3855 (2)0.14752 (11)0.0478 (5)
H13−0.29510.42330.18590.057*
C12−0.4069 (3)0.2868 (3)0.13576 (15)0.0633 (8)
H12−0.47660.26040.16580.076*
U11U22U33U12U13U23
S0.0438 (3)0.0249 (2)0.0400 (2)−0.0002 (2)0.0118 (2)0.00027 (19)
P0.0334 (2)0.01673 (19)0.0325 (2)−0.00014 (17)0.00382 (18)−0.00090 (16)
O20.0683 (12)0.0342 (8)0.0568 (9)0.0053 (8)0.0255 (9)−0.0081 (7)
O30.0429 (8)0.0435 (9)0.0780 (12)−0.0137 (8)0.0150 (8)−0.0002 (8)
O10.0544 (8)0.0169 (6)0.0414 (7)−0.0007 (6)0.0042 (7)−0.0001 (5)
N20.0398 (9)0.0332 (9)0.0393 (8)0.0046 (7)−0.0017 (7)−0.0013 (7)
N10.0336 (8)0.0301 (8)0.0433 (9)0.0012 (7)0.0082 (7)−0.0015 (7)
C160.0598 (15)0.0479 (13)0.0715 (17)0.0193 (12)−0.0217 (14)−0.0054 (13)
C110.083 (2)0.0558 (17)0.088 (2)−0.0198 (16)−0.0378 (19)0.0022 (16)
C100.092 (2)0.0602 (17)0.0673 (18)0.0035 (17)−0.0323 (18)−0.0242 (15)
C90.0606 (15)0.0588 (15)0.0460 (12)0.0044 (12)−0.0048 (11)−0.0095 (11)
C140.0360 (10)0.0378 (10)0.0394 (10)0.0035 (9)−0.0055 (8)−0.0014 (8)
C150.0426 (11)0.0498 (12)0.0335 (10)−0.0064 (10)0.0038 (9)−0.0025 (9)
C70.0481 (12)0.0276 (10)0.0681 (15)−0.0014 (9)0.0255 (12)−0.0040 (10)
C60.0321 (10)0.0344 (10)0.0445 (11)0.0045 (8)0.0053 (9)0.0037 (8)
C10.0411 (11)0.0380 (11)0.0562 (13)0.0045 (10)0.0081 (10)0.0102 (10)
C20.0521 (13)0.0568 (14)0.0572 (14)0.0027 (12)0.0138 (12)0.0231 (12)
C30.0648 (17)0.0809 (19)0.0404 (12)0.0116 (15)0.0189 (12)0.0099 (13)
N30.0405 (8)0.0157 (6)0.0376 (8)−0.0018 (6)0.0083 (7)−0.0012 (6)
C170.090 (2)0.0473 (13)0.0379 (11)0.0056 (14)−0.0010 (12)0.0081 (10)
C80.0402 (12)0.0805 (19)0.0558 (14)0.0078 (13)−0.0026 (11)−0.0025 (13)
C50.0418 (11)0.0420 (12)0.0505 (12)0.0027 (10)0.0077 (10)−0.0021 (9)
C40.0680 (16)0.0596 (16)0.0456 (12)0.0113 (13)0.0119 (11)−0.0092 (12)
C130.0491 (12)0.0486 (13)0.0456 (12)−0.0100 (10)−0.0059 (9)0.0022 (10)
C120.0523 (15)0.0623 (17)0.0751 (18)−0.0195 (13)−0.0145 (13)0.0149 (14)
S—O31.4287 (18)C15—H15B0.9700
S—O21.4317 (16)C7—C61.516 (3)
S—N31.6236 (16)C7—H7A0.9700
S—C171.744 (3)C7—H7B0.9700
P—O11.4794 (13)C6—C51.384 (3)
P—N21.6285 (18)C6—C11.390 (3)
P—N11.6326 (17)C1—C21.387 (3)
P—N31.6714 (15)C1—H10.9300
N2—C161.458 (3)C2—C31.378 (4)
N2—C151.461 (3)C2—H20.9300
N1—C71.465 (3)C3—C41.369 (4)
N1—C81.467 (3)C3—H30.9300
C16—H16A0.9600N3—H0.8600
C16—H16B0.9600C17—H17A0.9600
C16—H16C0.9600C17—H17B0.9600
C11—C121.368 (5)C17—H17C0.9600
C11—C101.367 (5)C8—H8A0.9600
C11—H110.9300C8—H8B0.9600
C10—C91.392 (4)C8—H8C0.9600
C10—H100.9300C5—C41.387 (3)
C9—C141.387 (3)C5—H50.9300
C9—H90.9300C4—H40.9300
C14—C131.378 (3)C13—C121.387 (4)
C14—C151.507 (3)C13—H130.9300
C15—H15A0.9700C12—H120.9300
O3—S—O2118.53 (12)C6—C7—H7A108.8
O3—S—N3109.61 (10)N1—C7—H7B108.8
O2—S—N3106.39 (9)C6—C7—H7B108.8
O3—S—C17107.61 (13)H7A—C7—H7B107.7
O2—S—C17109.08 (12)C5—C6—C1119.2 (2)
N3—S—C17104.79 (12)C5—C6—C7121.98 (19)
O1—P—N2117.02 (9)C1—C6—C7118.82 (19)
O1—P—N1110.51 (9)C2—C1—C6120.3 (2)
N2—P—N1106.20 (9)C2—C1—H1119.8
O1—P—N3108.94 (8)C6—C1—H1119.8
N2—P—N3104.84 (9)C3—C2—C1120.0 (2)
N1—P—N3108.98 (8)C3—C2—H2120.0
C16—N2—C15115.69 (19)C1—C2—H2120.0
C16—N2—P126.49 (17)C4—C3—C2119.8 (2)
C15—N2—P117.76 (15)C4—C3—H3120.1
C7—N1—C8115.7 (2)C2—C3—H3120.1
C7—N1—P120.48 (14)S—N3—P125.05 (9)
C8—N1—P118.83 (16)S—N3—H117.5
N2—C16—H16A109.5P—N3—H117.5
N2—C16—H16B109.5S—C17—H17A109.5
H16A—C16—H16B109.5S—C17—H17B109.5
N2—C16—H16C109.5H17A—C17—H17B109.5
H16A—C16—H16C109.5S—C17—H17C109.5
H16B—C16—H16C109.5H17A—C17—H17C109.5
C12—C11—C10120.5 (3)H17B—C17—H17C109.5
C12—C11—H11119.8N1—C8—H8A109.5
C10—C11—H11119.8N1—C8—H8B109.5
C11—C10—C9119.6 (3)H8A—C8—H8B109.5
C11—C10—H10120.2N1—C8—H8C109.5
C9—C10—H10120.2H8A—C8—H8C109.5
C14—C9—C10120.6 (3)H8B—C8—H8C109.5
C14—C9—H9119.7C6—C5—C4119.9 (2)
C10—C9—H9119.7C6—C5—H5120.1
C13—C14—C9118.5 (2)C4—C5—H5120.1
C13—C14—C15122.87 (19)C3—C4—C5120.8 (2)
C9—C14—C15118.6 (2)C3—C4—H4119.6
N2—C15—C14115.23 (18)C5—C4—H4119.6
N2—C15—H15A108.5C14—C13—C12120.8 (2)
C14—C15—H15A108.5C14—C13—H13119.6
N2—C15—H15B108.5C12—C13—H13119.6
C14—C15—H15B108.5C11—C12—C13119.9 (3)
H15A—C15—H15B107.5C11—C12—H12120.0
N1—C7—C6113.73 (16)C13—C12—H12120.0
N1—C7—H7A108.8
O1—P—N2—C16114.6 (2)P—N1—C7—C6−138.44 (18)
N1—P—N2—C16−121.5 (2)N1—C7—C6—C524.7 (3)
N3—P—N2—C16−6.2 (2)N1—C7—C6—C1−157.2 (2)
O1—P—N2—C15−62.24 (18)C5—C6—C1—C20.3 (3)
N1—P—N2—C1561.66 (17)C7—C6—C1—C2−177.8 (2)
N3—P—N2—C15176.96 (15)C6—C1—C2—C3−0.5 (4)
O1—P—N1—C7175.63 (16)C1—C2—C3—C40.3 (4)
N2—P—N1—C747.76 (19)O3—S—N3—P−41.70 (16)
N3—P—N1—C7−64.70 (18)O2—S—N3—P−170.99 (13)
O1—P—N1—C8−30.5 (2)C17—S—N3—P73.54 (16)
N2—P—N1—C8−158.39 (18)O1—P—N3—S−25.84 (16)
N3—P—N1—C889.15 (19)N2—P—N3—S100.16 (13)
C12—C11—C10—C9−0.9 (5)N1—P—N3—S−146.48 (13)
C11—C10—C9—C142.4 (5)C1—C6—C5—C40.1 (4)
C10—C9—C14—C13−1.7 (4)C7—C6—C5—C4178.2 (2)
C10—C9—C14—C15177.4 (2)C2—C3—C4—C50.2 (4)
C16—N2—C15—C14−72.4 (3)C6—C5—C4—C3−0.4 (4)
P—N2—C15—C14104.8 (2)C9—C14—C13—C12−0.3 (4)
C13—C14—C15—N2−15.1 (3)C15—C14—C13—C12−179.4 (2)
C9—C14—C15—N2165.9 (2)C10—C11—C12—C13−1.2 (5)
C8—N1—C7—C666.9 (3)C14—C13—C12—C111.8 (4)
D—H···AD—HH···AD···AD—H···A
N3—H···O1i0.861.912.7152 (19)155
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N3—H⋯O1i0.861.912.7152 (19)155

Symmetry code: (i) .

  3 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  N,N'-Dibenzyl-N''-(2,6-difluoro-benzo-yl)-N,N'-dimethyl-phospho-ric triamide.

Authors:  Mehrdad Pourayoubi; Atekeh Tarahhomi; Arnold L Rheingold; James A Golen
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-09-11

3.  N-(4-Meth-oxy-phen-yl)benzene-sulfonamide.

Authors:  Saba Ibrahim; M Nawaz Tahir; Nadeem Iqbal; Durre Shahwar; Muhammad Asam Raza
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-01-08
  3 in total
  1 in total

1.  Cyclo-hex-yl(meth-yl)ammonium {bis-[cyclo-hex-yl(meth-yl)amino]-phosphor-yl}(4-methyl-phenyl-sulfon-yl)aza-nide.

Authors:  Mehrdad Pourayoubi; Hassan Fadaei; Atekeh Tarahhomi; Masood Parvez
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-09-30
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