| Literature DB >> 21754554 |
Yan-Ling Zhang1, Xiao-Wei Zhang, Fu-Juan Zhang.
Abstract
In the title compound, C(14)H(19)N(3)S, the cyclo-hexane ring has a chair conformation. The almost planar amino-thio-urea unit (r.m.s. deviation = 0.0062 Å) is aligned at a dihedral angle of 45.23 (8)° with respect to the benzene ring. Inter-molecular N-H⋯N and N-H⋯S hydrogen bonding stabilizes the crystal structure.Entities:
Year: 2011 PMID: 21754554 PMCID: PMC3089110 DOI: 10.1107/S1600536811015510
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C14H19N3S | |
| Orthorhombic, | Cu |
| Hall symbol: -I 2b 2c | Cell parameters from 2807 reflections |
| θ = 3.2–70.3° | |
| µ = 1.87 mm−1 | |
| Prismatic, colorless | |
| 0.40 × 0.25 × 0.25 mm |
| Oxford Diffraction Xcalibur Eos Gemini diffractometer | 2583 independent reflections |
| Radiation source: fine-focus sealed tube | 2024 reflections with |
| graphite | |
| ω scans | θmax = 67.1°, θmin = 3.9° |
| Absorption correction: multi-scan ( | |
| 7202 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 2583 reflections | (Δ/σ)max < 0.001 |
| 172 parameters | Δρmax = 0.37 e Å−3 |
| 0 restraints | Δρmin = −0.25 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| S1 | 0.88952 (5) | 0.07068 (3) | 0.17935 (3) | 0.0599 (3) | |
| N1 | 0.84361 (13) | 0.02381 (8) | 0.04022 (10) | 0.0481 (5) | |
| N2 | 0.78485 (14) | −0.01953 (8) | 0.14881 (10) | 0.0498 (5) | |
| N3 | 0.74084 (15) | −0.05790 (8) | 0.09883 (10) | 0.0514 (5) | |
| C1 | 0.89252 (14) | 0.06343 (9) | −0.00784 (12) | 0.0450 (5) | |
| C2 | 0.89188 (19) | 0.12432 (11) | 0.00239 (14) | 0.0557 (6) | |
| H2A | 0.8572 | 0.1413 | 0.0414 | 0.067* | |
| C3 | 0.94341 (19) | 0.15961 (10) | −0.04609 (14) | 0.0597 (6) | |
| H3 | 0.9435 | 0.2004 | −0.0385 | 0.072* | |
| C4 | 0.99514 (19) | 0.13567 (10) | −0.10592 (13) | 0.0544 (6) | |
| C5 | 0.99072 (18) | 0.07526 (10) | −0.11773 (13) | 0.0520 (5) | |
| H5 | 1.0221 | 0.0585 | −0.1590 | 0.062* | |
| C6 | 0.94050 (17) | 0.03922 (10) | −0.06944 (12) | 0.0505 (5) | |
| H6 | 0.9388 | −0.0014 | −0.0782 | 0.061* | |
| C7 | 1.0565 (2) | 0.17332 (13) | −0.15541 (18) | 0.0741 (8) | |
| H7A | 1.0221 | 0.1928 | −0.1951 | 0.111* | |
| H7B | 1.1011 | 0.1486 | −0.1793 | 0.111* | |
| H7C | 1.0853 | 0.2025 | −0.1233 | 0.111* | |
| C8 | 0.83781 (15) | 0.02349 (9) | 0.11831 (12) | 0.0460 (5) | |
| C9 | 0.68926 (18) | −0.09724 (10) | 0.12732 (14) | 0.0538 (6) | |
| C10 | 0.6399 (2) | −0.13589 (14) | 0.07092 (18) | 0.0749 (8) | |
| H10A | 0.6617 | −0.1284 | 0.0186 | 0.090* | |
| H10B | 0.5765 | −0.1262 | 0.0723 | 0.090* | |
| C11 | 0.6526 (3) | −0.20137 (15) | 0.0908 (2) | 0.0911 (11) | |
| H11A | 0.6166 | −0.2254 | 0.0559 | 0.109* | |
| H11B | 0.7149 | −0.2122 | 0.0835 | 0.109* | |
| C12 | 0.6250 (3) | −0.21354 (16) | 0.1747 (2) | 0.0961 (11) | |
| H12A | 0.5615 | −0.2058 | 0.1808 | 0.115* | |
| H12B | 0.6358 | −0.2549 | 0.1869 | 0.115* | |
| C13 | 0.6773 (2) | −0.17499 (16) | 0.2301 (2) | 0.0873 (10) | |
| H13A | 0.7401 | −0.1861 | 0.2279 | 0.105* | |
| H13B | 0.6563 | −0.1820 | 0.2827 | 0.105* | |
| C14 | 0.6686 (2) | −0.10938 (14) | 0.21164 (16) | 0.0694 (7) | |
| H14A | 0.6081 | −0.0963 | 0.2232 | 0.083* | |
| H14B | 0.7096 | −0.0870 | 0.2443 | 0.083* | |
| H1 | 0.8188 (16) | −0.0081 (12) | 0.0192 (16) | 0.052 (7)* | |
| H2 | 0.799 (2) | −0.0305 (14) | 0.195 (2) | 0.075 (9)* |
| S1 | 0.0824 (5) | 0.0632 (4) | 0.0341 (3) | −0.0172 (3) | −0.0022 (3) | −0.0052 (2) |
| N1 | 0.0605 (11) | 0.0528 (9) | 0.0309 (8) | −0.0072 (9) | −0.0017 (8) | −0.0002 (7) |
| N2 | 0.0634 (11) | 0.0556 (10) | 0.0305 (8) | −0.0083 (9) | 0.0003 (9) | 0.0003 (7) |
| N3 | 0.0674 (12) | 0.0519 (9) | 0.0349 (9) | −0.0070 (9) | −0.0031 (9) | −0.0016 (7) |
| C1 | 0.0521 (12) | 0.0514 (11) | 0.0316 (10) | −0.0003 (9) | −0.0032 (9) | 0.0030 (8) |
| C2 | 0.0735 (15) | 0.0532 (11) | 0.0403 (11) | 0.0110 (11) | 0.0104 (11) | 0.0009 (9) |
| C3 | 0.0864 (17) | 0.0448 (11) | 0.0478 (12) | 0.0051 (11) | 0.0066 (13) | 0.0030 (9) |
| C4 | 0.0675 (14) | 0.0561 (12) | 0.0395 (11) | 0.0009 (11) | 0.0037 (11) | 0.0078 (9) |
| C5 | 0.0638 (13) | 0.0580 (12) | 0.0344 (10) | 0.0066 (11) | 0.0062 (10) | 0.0002 (9) |
| C6 | 0.0673 (14) | 0.0482 (10) | 0.0358 (10) | 0.0004 (10) | −0.0008 (10) | −0.0013 (8) |
| C7 | 0.094 (2) | 0.0640 (14) | 0.0641 (16) | −0.0064 (15) | 0.0204 (16) | 0.0083 (13) |
| C8 | 0.0529 (12) | 0.0526 (11) | 0.0323 (10) | 0.0015 (9) | 0.0001 (9) | −0.0013 (8) |
| C9 | 0.0626 (14) | 0.0548 (11) | 0.0441 (12) | −0.0055 (11) | −0.0049 (11) | 0.0044 (9) |
| C10 | 0.092 (2) | 0.0761 (16) | 0.0568 (15) | −0.0252 (16) | −0.0137 (15) | 0.0025 (13) |
| C11 | 0.114 (3) | 0.0713 (17) | 0.088 (2) | −0.0287 (19) | 0.002 (2) | −0.0052 (16) |
| C12 | 0.109 (3) | 0.0764 (19) | 0.103 (3) | −0.0260 (19) | 0.007 (2) | 0.0240 (19) |
| C13 | 0.088 (2) | 0.102 (2) | 0.0714 (19) | −0.0172 (19) | 0.0029 (17) | 0.0367 (18) |
| C14 | 0.0722 (16) | 0.0869 (18) | 0.0490 (14) | −0.0193 (15) | 0.0081 (13) | 0.0049 (13) |
| S1—C8 | 1.681 (2) | C7—H7A | 0.9600 |
| N1—C8 | 1.343 (3) | C7—H7B | 0.9600 |
| N1—C1 | 1.418 (3) | C7—H7C | 0.9600 |
| N1—H1 | 0.89 (3) | C9—C10 | 1.497 (4) |
| N2—C8 | 1.356 (3) | C9—C14 | 1.505 (3) |
| N2—N3 | 1.384 (3) | C10—C11 | 1.528 (5) |
| N2—H2 | 0.86 (3) | C10—H10A | 0.9700 |
| N3—C9 | 1.272 (3) | C10—H10B | 0.9700 |
| C1—C2 | 1.385 (3) | C11—C12 | 1.523 (5) |
| C1—C6 | 1.389 (3) | C11—H11A | 0.9700 |
| C2—C3 | 1.385 (4) | C11—H11B | 0.9700 |
| C2—H2A | 0.9300 | C12—C13 | 1.506 (5) |
| C3—C4 | 1.393 (4) | C12—H12A | 0.9700 |
| C3—H3 | 0.9300 | C12—H12B | 0.9700 |
| C4—C5 | 1.379 (3) | C13—C14 | 1.519 (5) |
| C4—C7 | 1.510 (4) | C13—H13A | 0.9700 |
| C5—C6 | 1.382 (3) | C13—H13B | 0.9700 |
| C5—H5 | 0.9300 | C14—H14A | 0.9700 |
| C6—H6 | 0.9300 | C14—H14B | 0.9700 |
| C8—N1—C1 | 128.10 (19) | N3—C9—C10 | 117.1 (2) |
| C8—N1—H1 | 112.0 (17) | N3—C9—C14 | 128.3 (2) |
| C1—N1—H1 | 119.4 (17) | C10—C9—C14 | 114.6 (2) |
| C8—N2—N3 | 118.98 (17) | C9—C10—C11 | 111.0 (3) |
| C8—N2—H2 | 115 (2) | C9—C10—H10A | 109.4 |
| N3—N2—H2 | 121 (2) | C11—C10—H10A | 109.4 |
| C9—N3—N2 | 119.01 (19) | C9—C10—H10B | 109.4 |
| C2—C1—C6 | 119.4 (2) | C11—C10—H10B | 109.4 |
| C2—C1—N1 | 123.2 (2) | H10A—C10—H10B | 108.0 |
| C6—C1—N1 | 117.39 (19) | C12—C11—C10 | 110.6 (3) |
| C3—C2—C1 | 119.4 (2) | C12—C11—H11A | 109.5 |
| C3—C2—H2A | 120.3 | C10—C11—H11A | 109.5 |
| C1—C2—H2A | 120.3 | C12—C11—H11B | 109.5 |
| C2—C3—C4 | 121.8 (2) | C10—C11—H11B | 109.5 |
| C2—C3—H3 | 119.1 | H11A—C11—H11B | 108.1 |
| C4—C3—H3 | 119.1 | C13—C12—C11 | 110.7 (3) |
| C5—C4—C3 | 117.7 (2) | C13—C12—H12A | 109.5 |
| C5—C4—C7 | 120.1 (2) | C11—C12—H12A | 109.5 |
| C3—C4—C7 | 122.1 (2) | C13—C12—H12B | 109.5 |
| C4—C5—C6 | 121.3 (2) | C11—C12—H12B | 109.5 |
| C4—C5—H5 | 119.4 | H12A—C12—H12B | 108.1 |
| C6—C5—H5 | 119.4 | C12—C13—C14 | 112.8 (3) |
| C5—C6—C1 | 120.3 (2) | C12—C13—H13A | 109.0 |
| C5—C6—H6 | 119.8 | C14—C13—H13A | 109.0 |
| C1—C6—H6 | 119.8 | C12—C13—H13B | 109.0 |
| C4—C7—H7A | 109.5 | C14—C13—H13B | 109.0 |
| C4—C7—H7B | 109.5 | H13A—C13—H13B | 107.8 |
| H7A—C7—H7B | 109.5 | C9—C14—C13 | 111.1 (3) |
| C4—C7—H7C | 109.5 | C9—C14—H14A | 109.4 |
| H7A—C7—H7C | 109.5 | C13—C14—H14A | 109.4 |
| H7B—C7—H7C | 109.5 | C9—C14—H14B | 109.4 |
| N1—C8—N2 | 115.25 (19) | C13—C14—H14B | 109.4 |
| N1—C8—S1 | 126.08 (17) | H14A—C14—H14B | 108.0 |
| N2—C8—S1 | 118.67 (16) |
| H··· | ||||
| N1—H1···N3i | 0.89 (3) | 2.48 (3) | 3.268 (3) | 148 (2) |
| N2—H2···S1ii | 0.86 (3) | 2.70 (3) | 3.531 (2) | 164 (3) |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N1—H1⋯N3i | 0.89 (3) | 2.48 (3) | 3.268 (3) | 148 (2) |
| N2—H2⋯S1ii | 0.86 (3) | 2.70 (3) | 3.531 (2) | 164 (3) |
Symmetry codes: (i) ; (ii) .