| Literature DB >> 21754547 |
Sylvain Bernès, Guadalupe Hernández, Jaime Vázquez, Alejandra Tovar, René Gutiérrez.
Abstract
In the title chiral aldimine, C(19)H(17)N, the azomethine group is not fully conjugated with the phenyl substituent: the dihedral angle between phenyl and C(*)-N=C mean planes is ϕ(3) = 23.0 (2)°. Compared with the earlier DFT-B3LYP/6-31 G(d) computations from the literature, the C=N-C(*)-C(naph-thyl) torsion angle, found at ϕ(2) = -118.0 (2)° in the X-ray structure, does not match the angle calculated for the potential minimum energy at ϕ(2) = 0°. However, this angle is close to the second potential energy minimum at ϕ(2) = -120° which is ca. 8.5 kJ mol(-1) above the global energy minimum. Thus, the reported X-ray structure corresponds to the second most likely (according to DFT) conformer, allowing the existence of other polymorphs to be anti-cipated.Entities:
Year: 2011 PMID: 21754547 PMCID: PMC3089063 DOI: 10.1107/S1600536811012980
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C19H17N | |
| Monoclinic, | Melting point: 352 K |
| Hall symbol: P 2yb | Mo |
| Cell parameters from 80 reflections | |
| θ = 4.9–12.3° | |
| µ = 0.07 mm−1 | |
| β = 95.033 (7)° | |
| Irregular, colourless | |
| 0.4 × 0.2 × 0.2 mm |
| Siemens P4 diffractometer | |
| Radiation source: fine-focus sealed tube | θmax = 26.2°, θmin = 2.5° |
| graphite | |
| 2θ/ω scans | |
| 2470 measured reflections | |
| 1595 independent reflections | 3 standard reflections every 97 reflections |
| 1276 reflections with | intensity decay: 1% |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H-atom parameters constrained | |
| (Δ/σ)max < 0.001 | |
| 1595 reflections | Δρmax = 0.09 e Å−3 |
| 183 parameters | Δρmin = −0.08 e Å−3 |
| 1 restraint | Extinction correction: |
| 0 constraints | Extinction coefficient: 0.063 (8) |
| Primary atom site location: structure-invariant direct methods | Absolute structure: 223 Friedel pairs merged |
| N1 | 0.3971 (2) | 0.6059 (3) | 0.71942 (14) | 0.0646 (5) | |
| C2 | 0.4226 (3) | 0.6094 (3) | 0.61588 (18) | 0.0643 (6) | |
| H2A | 0.3363 | 0.6432 | 0.5631 | 0.077* | |
| C3 | 0.5833 (3) | 0.5624 (3) | 0.57416 (18) | 0.0662 (6) | |
| C4 | 0.6202 (4) | 0.6121 (4) | 0.4665 (2) | 0.0906 (8) | |
| H4A | 0.5440 | 0.6761 | 0.4203 | 0.109* | |
| C5 | 0.7722 (5) | 0.5659 (5) | 0.4274 (3) | 0.1090 (11) | |
| H5A | 0.7989 | 0.6028 | 0.3561 | 0.131* | |
| C6 | 0.8809 (4) | 0.4676 (5) | 0.4930 (3) | 0.1058 (12) | |
| H6A | 0.9813 | 0.4356 | 0.4660 | 0.127* | |
| C7 | 0.8442 (3) | 0.4155 (5) | 0.5982 (3) | 0.0977 (10) | |
| H7A | 0.9188 | 0.3468 | 0.6423 | 0.117* | |
| C8 | 0.6973 (3) | 0.4640 (4) | 0.6394 (2) | 0.0748 (7) | |
| H8A | 0.6745 | 0.4301 | 0.7121 | 0.090* | |
| C9 | 0.2278 (2) | 0.6405 (3) | 0.74826 (16) | 0.0583 (5) | |
| H9A | 0.1547 | 0.6558 | 0.6781 | 0.070* | |
| C10 | 0.1713 (3) | 0.4844 (3) | 0.8128 (2) | 0.0747 (7) | |
| H10A | 0.1743 | 0.3844 | 0.7654 | 0.112* | |
| H10B | 0.0599 | 0.5025 | 0.8328 | 0.112* | |
| H10C | 0.2442 | 0.4681 | 0.8809 | 0.112* | |
| C11 | 0.2202 (3) | 0.7992 (3) | 0.82185 (16) | 0.0538 (5) | |
| C12 | 0.3561 (3) | 0.8538 (3) | 0.88883 (18) | 0.0648 (6) | |
| H12A | 0.4567 | 0.7968 | 0.8856 | 0.078* | |
| C13 | 0.3473 (3) | 0.9946 (3) | 0.9628 (2) | 0.0760 (7) | |
| H13A | 0.4412 | 1.0271 | 1.0092 | 0.091* | |
| C14 | 0.2046 (3) | 1.0830 (3) | 0.96724 (19) | 0.0729 (7) | |
| H14A | 0.2011 | 1.1765 | 1.0161 | 0.087* | |
| C15 | 0.0608 (3) | 1.0349 (3) | 0.89846 (17) | 0.0595 (5) | |
| C16 | −0.0910 (3) | 1.1256 (3) | 0.90111 (19) | 0.0729 (7) | |
| H16A | −0.0950 | 1.2215 | 0.9478 | 0.088* | |
| C17 | −0.2301 (3) | 1.0758 (4) | 0.8373 (2) | 0.0776 (7) | |
| H17A | −0.3285 | 1.1369 | 0.8407 | 0.093* | |
| C18 | −0.2257 (3) | 0.9330 (4) | 0.7667 (2) | 0.0731 (7) | |
| H18A | −0.3217 | 0.8987 | 0.7233 | 0.088* | |
| C19 | −0.0826 (2) | 0.8434 (3) | 0.76058 (18) | 0.0618 (6) | |
| H19A | −0.0822 | 0.7490 | 0.7122 | 0.074* | |
| C20 | 0.0660 (2) | 0.8899 (3) | 0.82582 (16) | 0.0529 (5) |
| N1 | 0.0602 (10) | 0.0696 (13) | 0.0646 (10) | 0.0073 (10) | 0.0089 (8) | −0.0043 (10) |
| C2 | 0.0694 (13) | 0.0571 (13) | 0.0670 (12) | 0.0072 (12) | 0.0095 (11) | −0.0043 (11) |
| C3 | 0.0726 (14) | 0.0565 (12) | 0.0718 (12) | −0.0021 (11) | 0.0185 (11) | −0.0127 (11) |
| C4 | 0.121 (2) | 0.0679 (16) | 0.0887 (16) | 0.0076 (18) | 0.0422 (16) | −0.0017 (14) |
| C5 | 0.139 (3) | 0.084 (2) | 0.116 (2) | −0.017 (2) | 0.074 (2) | −0.023 (2) |
| C6 | 0.0783 (18) | 0.100 (2) | 0.145 (3) | −0.0151 (19) | 0.0411 (19) | −0.059 (2) |
| C7 | 0.0638 (15) | 0.112 (3) | 0.117 (2) | 0.0058 (16) | 0.0057 (15) | −0.052 (2) |
| C8 | 0.0638 (14) | 0.0823 (17) | 0.0782 (13) | 0.0047 (14) | 0.0061 (11) | −0.0211 (13) |
| C9 | 0.0544 (11) | 0.0602 (12) | 0.0606 (11) | 0.0038 (11) | 0.0073 (9) | −0.0060 (11) |
| C10 | 0.0847 (16) | 0.0558 (14) | 0.0842 (15) | −0.0062 (13) | 0.0114 (12) | −0.0021 (13) |
| C11 | 0.0571 (11) | 0.0528 (12) | 0.0530 (10) | −0.0038 (10) | 0.0127 (9) | 0.0041 (9) |
| C12 | 0.0600 (13) | 0.0637 (13) | 0.0708 (12) | −0.0029 (12) | 0.0060 (11) | 0.0000 (12) |
| C13 | 0.0773 (17) | 0.0729 (17) | 0.0765 (14) | −0.0175 (15) | −0.0008 (12) | −0.0106 (14) |
| C14 | 0.0912 (17) | 0.0565 (14) | 0.0723 (13) | −0.0121 (13) | 0.0155 (12) | −0.0119 (11) |
| C15 | 0.0730 (14) | 0.0493 (11) | 0.0587 (11) | −0.0047 (11) | 0.0209 (10) | 0.0048 (10) |
| C16 | 0.0884 (18) | 0.0584 (13) | 0.0768 (14) | 0.0041 (14) | 0.0341 (13) | −0.0024 (13) |
| C17 | 0.0715 (16) | 0.0747 (17) | 0.0901 (15) | 0.0131 (14) | 0.0269 (13) | 0.0072 (14) |
| C18 | 0.0605 (13) | 0.0809 (17) | 0.0794 (14) | 0.0022 (13) | 0.0145 (11) | 0.0021 (13) |
| C19 | 0.0601 (13) | 0.0612 (13) | 0.0655 (11) | −0.0024 (11) | 0.0139 (10) | −0.0031 (11) |
| C20 | 0.0591 (11) | 0.0495 (11) | 0.0520 (9) | −0.0052 (9) | 0.0166 (8) | 0.0045 (9) |
| N1—C2 | 1.255 (2) | C10—H10C | 0.9600 |
| N1—C9 | 1.462 (3) | C11—C12 | 1.362 (3) |
| C2—C3 | 1.473 (3) | C11—C20 | 1.436 (3) |
| C2—H2A | 0.9300 | C12—C13 | 1.405 (3) |
| C3—C8 | 1.379 (3) | C12—H12A | 0.9300 |
| C3—C4 | 1.383 (3) | C13—C14 | 1.348 (3) |
| C4—C5 | 1.395 (4) | C13—H13A | 0.9300 |
| C4—H4A | 0.9300 | C14—C15 | 1.407 (3) |
| C5—C6 | 1.355 (5) | C14—H14A | 0.9300 |
| C5—H5A | 0.9300 | C15—C16 | 1.418 (3) |
| C6—C7 | 1.361 (5) | C15—C20 | 1.420 (3) |
| C6—H6A | 0.9300 | C16—C17 | 1.352 (3) |
| C7—C8 | 1.373 (3) | C16—H16A | 0.9300 |
| C7—H7A | 0.9300 | C17—C18 | 1.391 (4) |
| C8—H8A | 0.9300 | C17—H17A | 0.9300 |
| C9—C11 | 1.514 (3) | C18—C19 | 1.358 (3) |
| C9—C10 | 1.525 (3) | C18—H18A | 0.9300 |
| C9—H9A | 0.9800 | C19—C20 | 1.414 (3) |
| C10—H10A | 0.9600 | C19—H19A | 0.9300 |
| C10—H10B | 0.9600 | ||
| C2—N1—C9 | 117.30 (18) | H10A—C10—H10C | 109.5 |
| N1—C2—C3 | 122.9 (2) | H10B—C10—H10C | 109.5 |
| N1—C2—H2A | 118.5 | C12—C11—C20 | 118.99 (19) |
| C3—C2—H2A | 118.5 | C12—C11—C9 | 121.04 (19) |
| C8—C3—C4 | 118.6 (2) | C20—C11—C9 | 119.90 (18) |
| C8—C3—C2 | 121.2 (2) | C11—C12—C13 | 121.4 (2) |
| C4—C3—C2 | 120.2 (2) | C11—C12—H12A | 119.3 |
| C3—C4—C5 | 119.8 (3) | C13—C12—H12A | 119.3 |
| C3—C4—H4A | 120.1 | C14—C13—C12 | 120.8 (2) |
| C5—C4—H4A | 120.1 | C14—C13—H13A | 119.6 |
| C6—C5—C4 | 120.2 (3) | C12—C13—H13A | 119.6 |
| C6—C5—H5A | 119.9 | C13—C14—C15 | 120.5 (2) |
| C4—C5—H5A | 119.9 | C13—C14—H14A | 119.8 |
| C5—C6—C7 | 120.4 (3) | C15—C14—H14A | 119.8 |
| C5—C6—H6A | 119.8 | C14—C15—C16 | 121.8 (2) |
| C7—C6—H6A | 119.8 | C14—C15—C20 | 119.5 (2) |
| C6—C7—C8 | 120.2 (3) | C16—C15—C20 | 118.7 (2) |
| C6—C7—H7A | 119.9 | C17—C16—C15 | 121.5 (2) |
| C8—C7—H7A | 119.9 | C17—C16—H16A | 119.2 |
| C7—C8—C3 | 120.8 (3) | C15—C16—H16A | 119.2 |
| C7—C8—H8A | 119.6 | C16—C17—C18 | 119.9 (2) |
| C3—C8—H8A | 119.6 | C16—C17—H17A | 120.1 |
| N1—C9—C11 | 111.65 (18) | C18—C17—H17A | 120.1 |
| N1—C9—C10 | 107.2 (2) | C19—C18—C17 | 120.6 (2) |
| C11—C9—C10 | 109.68 (15) | C19—C18—H18A | 119.7 |
| N1—C9—H9A | 109.4 | C17—C18—H18A | 119.7 |
| C11—C9—H9A | 109.4 | C18—C19—C20 | 121.7 (2) |
| C10—C9—H9A | 109.4 | C18—C19—H19A | 119.2 |
| C9—C10—H10A | 109.5 | C20—C19—H19A | 119.2 |
| C9—C10—H10B | 109.5 | C19—C20—C15 | 117.57 (19) |
| H10A—C10—H10B | 109.5 | C19—C20—C11 | 123.62 (18) |
| C9—C10—H10C | 109.5 | C15—C20—C11 | 118.81 (18) |
| C9—N1—C2—C3 | −174.6 (2) | C11—C12—C13—C14 | −1.9 (4) |
| N1—C2—C3—C8 | 19.9 (4) | C12—C13—C14—C15 | 0.6 (4) |
| N1—C2—C3—C4 | −162.2 (3) | C13—C14—C15—C16 | −179.9 (2) |
| C8—C3—C4—C5 | −1.6 (4) | C13—C14—C15—C20 | 1.4 (3) |
| C2—C3—C4—C5 | −179.5 (2) | C14—C15—C16—C17 | −178.0 (2) |
| C3—C4—C5—C6 | 2.3 (5) | C20—C15—C16—C17 | 0.7 (3) |
| C4—C5—C6—C7 | −1.1 (5) | C15—C16—C17—C18 | −0.3 (4) |
| C5—C6—C7—C8 | −0.8 (5) | C16—C17—C18—C19 | −0.4 (4) |
| C6—C7—C8—C3 | 1.6 (4) | C17—C18—C19—C20 | 0.6 (3) |
| C4—C3—C8—C7 | −0.3 (4) | C18—C19—C20—C15 | −0.1 (3) |
| C2—C3—C8—C7 | 177.6 (3) | C18—C19—C20—C11 | −179.8 (2) |
| C2—N1—C9—C11 | −118.0 (2) | C14—C15—C20—C19 | 178.3 (2) |
| C2—N1—C9—C10 | 121.9 (2) | C16—C15—C20—C19 | −0.5 (3) |
| N1—C9—C11—C12 | −25.3 (3) | C14—C15—C20—C11 | −2.0 (3) |
| C10—C9—C11—C12 | 93.4 (2) | C16—C15—C20—C11 | 179.16 (18) |
| N1—C9—C11—C20 | 157.71 (17) | C12—C11—C20—C19 | −179.5 (2) |
| C10—C9—C11—C20 | −83.6 (2) | C9—C11—C20—C19 | −2.5 (3) |
| C20—C11—C12—C13 | 1.1 (3) | C12—C11—C20—C15 | 0.8 (3) |
| C9—C11—C12—C13 | −175.92 (19) | C9—C11—C20—C15 | 177.88 (17) |