Literature DB >> 21754547

(S)-(+)-N-Benzyl-idene-1-(1-naphth-yl)ethyl-amine.

Sylvain Bernès, Guadalupe Hernández, Jaime Vázquez, Alejandra Tovar, René Gutiérrez.   

Abstract

In the title chiral aldimine, C(19)H(17)N, the azomethine group is not fully conjugated with the phenyl substituent: the dihedral angle between phenyl and C(*)-N=C mean planes is ϕ(3) = 23.0 (2)°. Compared with the earlier DFT-B3LYP/6-31 G(d) computations from the literature, the C=N-C(*)-C(naph-thyl) torsion angle, found at ϕ(2) = -118.0 (2)° in the X-ray structure, does not match the angle calculated for the potential minimum energy at ϕ(2) = 0°. However, this angle is close to the second potential energy minimum at ϕ(2) = -120° which is ca. 8.5 kJ mol(-1) above the global energy minimum. Thus, the reported X-ray structure corresponds to the second most likely (according to DFT) conformer, allowing the existence of other polymorphs to be anti-cipated.

Entities:  

Year:  2011        PMID: 21754547      PMCID: PMC3089063          DOI: 10.1107/S1600536811012980

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For a typical synthesis of the title compound, see: Lee & Ahn (2002 ▶). For general background to solvent-free synthesis, see: Tanaka & Toda (2000 ▶). For the structures of related imines, see: Espinosa Leija et al. (2009 ▶); Bernès et al. (2010 ▶). For the DFT study of the title compound (R enanti­omer), see: Fukuda et al. (2007 ▶).

Experimental

Crystal data

C19H17N M = 259.34 Monoclinic, a = 8.0761 (8) Å b = 7.7874 (8) Å c = 11.7760 (11) Å β = 95.033 (7)° V = 737.76 (13) Å3 Z = 2 Mo Kα radiation μ = 0.07 mm−1 T = 298 K 0.4 × 0.2 × 0.2 mm

Data collection

Siemens P4 diffractometer 2470 measured reflections 1595 independent reflections 1276 reflections with I > 2σ(I) R int = 0.017 3 standard reflections every 97 reflections intensity decay: 1%

Refinement

R[F 2 > 2σ(F 2)] = 0.034 wR(F 2) = 0.094 S = 1.02 1595 reflections 183 parameters 1 restraint H-atom parameters constrained Δρmax = 0.09 e Å−3 Δρmin = −0.08 e Å−3 Data collection: XSCANS (Siemens, 1996 ▶); cell refinement: XSCANS; data reduction: XSCANS; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: Mercury (Macrae et al., 2006 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536811012980/ld2008sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536811012980/ld2008Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C19H17NF(000) = 276
Mr = 259.34Dx = 1.167 Mg m3
Monoclinic, P21Melting point: 352 K
Hall symbol: P 2ybMo Kα radiation, λ = 0.71073 Å
a = 8.0761 (8) ÅCell parameters from 80 reflections
b = 7.7874 (8) Åθ = 4.9–12.3°
c = 11.7760 (11) ŵ = 0.07 mm1
β = 95.033 (7)°T = 298 K
V = 737.76 (13) Å3Irregular, colourless
Z = 20.4 × 0.2 × 0.2 mm
Siemens P4 diffractometerRint = 0.017
Radiation source: fine-focus sealed tubeθmax = 26.2°, θmin = 2.5°
graphiteh = −10→3
2θ/ω scansk = −1→9
2470 measured reflectionsl = −14→14
1595 independent reflections3 standard reflections every 97 reflections
1276 reflections with I > 2σ(I) intensity decay: 1%
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.034H-atom parameters constrained
wR(F2) = 0.094w = 1/[σ2(Fo2) + (0.0477P)2 + 0.0347P] where P = (Fo2 + 2Fc2)/3
S = 1.02(Δ/σ)max < 0.001
1595 reflectionsΔρmax = 0.09 e Å3
183 parametersΔρmin = −0.08 e Å3
1 restraintExtinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
0 constraintsExtinction coefficient: 0.063 (8)
Primary atom site location: structure-invariant direct methodsAbsolute structure: 223 Friedel pairs merged
xyzUiso*/Ueq
N10.3971 (2)0.6059 (3)0.71942 (14)0.0646 (5)
C20.4226 (3)0.6094 (3)0.61588 (18)0.0643 (6)
H2A0.33630.64320.56310.077*
C30.5833 (3)0.5624 (3)0.57416 (18)0.0662 (6)
C40.6202 (4)0.6121 (4)0.4665 (2)0.0906 (8)
H4A0.54400.67610.42030.109*
C50.7722 (5)0.5659 (5)0.4274 (3)0.1090 (11)
H5A0.79890.60280.35610.131*
C60.8809 (4)0.4676 (5)0.4930 (3)0.1058 (12)
H6A0.98130.43560.46600.127*
C70.8442 (3)0.4155 (5)0.5982 (3)0.0977 (10)
H7A0.91880.34680.64230.117*
C80.6973 (3)0.4640 (4)0.6394 (2)0.0748 (7)
H8A0.67450.43010.71210.090*
C90.2278 (2)0.6405 (3)0.74826 (16)0.0583 (5)
H9A0.15470.65580.67810.070*
C100.1713 (3)0.4844 (3)0.8128 (2)0.0747 (7)
H10A0.17430.38440.76540.112*
H10B0.05990.50250.83280.112*
H10C0.24420.46810.88090.112*
C110.2202 (3)0.7992 (3)0.82185 (16)0.0538 (5)
C120.3561 (3)0.8538 (3)0.88883 (18)0.0648 (6)
H12A0.45670.79680.88560.078*
C130.3473 (3)0.9946 (3)0.9628 (2)0.0760 (7)
H13A0.44121.02711.00920.091*
C140.2046 (3)1.0830 (3)0.96724 (19)0.0729 (7)
H14A0.20111.17651.01610.087*
C150.0608 (3)1.0349 (3)0.89846 (17)0.0595 (5)
C16−0.0910 (3)1.1256 (3)0.90111 (19)0.0729 (7)
H16A−0.09501.22150.94780.088*
C17−0.2301 (3)1.0758 (4)0.8373 (2)0.0776 (7)
H17A−0.32851.13690.84070.093*
C18−0.2257 (3)0.9330 (4)0.7667 (2)0.0731 (7)
H18A−0.32170.89870.72330.088*
C19−0.0826 (2)0.8434 (3)0.76058 (18)0.0618 (6)
H19A−0.08220.74900.71220.074*
C200.0660 (2)0.8899 (3)0.82582 (16)0.0529 (5)
U11U22U33U12U13U23
N10.0602 (10)0.0696 (13)0.0646 (10)0.0073 (10)0.0089 (8)−0.0043 (10)
C20.0694 (13)0.0571 (13)0.0670 (12)0.0072 (12)0.0095 (11)−0.0043 (11)
C30.0726 (14)0.0565 (12)0.0718 (12)−0.0021 (11)0.0185 (11)−0.0127 (11)
C40.121 (2)0.0679 (16)0.0887 (16)0.0076 (18)0.0422 (16)−0.0017 (14)
C50.139 (3)0.084 (2)0.116 (2)−0.017 (2)0.074 (2)−0.023 (2)
C60.0783 (18)0.100 (2)0.145 (3)−0.0151 (19)0.0411 (19)−0.059 (2)
C70.0638 (15)0.112 (3)0.117 (2)0.0058 (16)0.0057 (15)−0.052 (2)
C80.0638 (14)0.0823 (17)0.0782 (13)0.0047 (14)0.0061 (11)−0.0211 (13)
C90.0544 (11)0.0602 (12)0.0606 (11)0.0038 (11)0.0073 (9)−0.0060 (11)
C100.0847 (16)0.0558 (14)0.0842 (15)−0.0062 (13)0.0114 (12)−0.0021 (13)
C110.0571 (11)0.0528 (12)0.0530 (10)−0.0038 (10)0.0127 (9)0.0041 (9)
C120.0600 (13)0.0637 (13)0.0708 (12)−0.0029 (12)0.0060 (11)0.0000 (12)
C130.0773 (17)0.0729 (17)0.0765 (14)−0.0175 (15)−0.0008 (12)−0.0106 (14)
C140.0912 (17)0.0565 (14)0.0723 (13)−0.0121 (13)0.0155 (12)−0.0119 (11)
C150.0730 (14)0.0493 (11)0.0587 (11)−0.0047 (11)0.0209 (10)0.0048 (10)
C160.0884 (18)0.0584 (13)0.0768 (14)0.0041 (14)0.0341 (13)−0.0024 (13)
C170.0715 (16)0.0747 (17)0.0901 (15)0.0131 (14)0.0269 (13)0.0072 (14)
C180.0605 (13)0.0809 (17)0.0794 (14)0.0022 (13)0.0145 (11)0.0021 (13)
C190.0601 (13)0.0612 (13)0.0655 (11)−0.0024 (11)0.0139 (10)−0.0031 (11)
C200.0591 (11)0.0495 (11)0.0520 (9)−0.0052 (9)0.0166 (8)0.0045 (9)
N1—C21.255 (2)C10—H10C0.9600
N1—C91.462 (3)C11—C121.362 (3)
C2—C31.473 (3)C11—C201.436 (3)
C2—H2A0.9300C12—C131.405 (3)
C3—C81.379 (3)C12—H12A0.9300
C3—C41.383 (3)C13—C141.348 (3)
C4—C51.395 (4)C13—H13A0.9300
C4—H4A0.9300C14—C151.407 (3)
C5—C61.355 (5)C14—H14A0.9300
C5—H5A0.9300C15—C161.418 (3)
C6—C71.361 (5)C15—C201.420 (3)
C6—H6A0.9300C16—C171.352 (3)
C7—C81.373 (3)C16—H16A0.9300
C7—H7A0.9300C17—C181.391 (4)
C8—H8A0.9300C17—H17A0.9300
C9—C111.514 (3)C18—C191.358 (3)
C9—C101.525 (3)C18—H18A0.9300
C9—H9A0.9800C19—C201.414 (3)
C10—H10A0.9600C19—H19A0.9300
C10—H10B0.9600
C2—N1—C9117.30 (18)H10A—C10—H10C109.5
N1—C2—C3122.9 (2)H10B—C10—H10C109.5
N1—C2—H2A118.5C12—C11—C20118.99 (19)
C3—C2—H2A118.5C12—C11—C9121.04 (19)
C8—C3—C4118.6 (2)C20—C11—C9119.90 (18)
C8—C3—C2121.2 (2)C11—C12—C13121.4 (2)
C4—C3—C2120.2 (2)C11—C12—H12A119.3
C3—C4—C5119.8 (3)C13—C12—H12A119.3
C3—C4—H4A120.1C14—C13—C12120.8 (2)
C5—C4—H4A120.1C14—C13—H13A119.6
C6—C5—C4120.2 (3)C12—C13—H13A119.6
C6—C5—H5A119.9C13—C14—C15120.5 (2)
C4—C5—H5A119.9C13—C14—H14A119.8
C5—C6—C7120.4 (3)C15—C14—H14A119.8
C5—C6—H6A119.8C14—C15—C16121.8 (2)
C7—C6—H6A119.8C14—C15—C20119.5 (2)
C6—C7—C8120.2 (3)C16—C15—C20118.7 (2)
C6—C7—H7A119.9C17—C16—C15121.5 (2)
C8—C7—H7A119.9C17—C16—H16A119.2
C7—C8—C3120.8 (3)C15—C16—H16A119.2
C7—C8—H8A119.6C16—C17—C18119.9 (2)
C3—C8—H8A119.6C16—C17—H17A120.1
N1—C9—C11111.65 (18)C18—C17—H17A120.1
N1—C9—C10107.2 (2)C19—C18—C17120.6 (2)
C11—C9—C10109.68 (15)C19—C18—H18A119.7
N1—C9—H9A109.4C17—C18—H18A119.7
C11—C9—H9A109.4C18—C19—C20121.7 (2)
C10—C9—H9A109.4C18—C19—H19A119.2
C9—C10—H10A109.5C20—C19—H19A119.2
C9—C10—H10B109.5C19—C20—C15117.57 (19)
H10A—C10—H10B109.5C19—C20—C11123.62 (18)
C9—C10—H10C109.5C15—C20—C11118.81 (18)
C9—N1—C2—C3−174.6 (2)C11—C12—C13—C14−1.9 (4)
N1—C2—C3—C819.9 (4)C12—C13—C14—C150.6 (4)
N1—C2—C3—C4−162.2 (3)C13—C14—C15—C16−179.9 (2)
C8—C3—C4—C5−1.6 (4)C13—C14—C15—C201.4 (3)
C2—C3—C4—C5−179.5 (2)C14—C15—C16—C17−178.0 (2)
C3—C4—C5—C62.3 (5)C20—C15—C16—C170.7 (3)
C4—C5—C6—C7−1.1 (5)C15—C16—C17—C18−0.3 (4)
C5—C6—C7—C8−0.8 (5)C16—C17—C18—C19−0.4 (4)
C6—C7—C8—C31.6 (4)C17—C18—C19—C200.6 (3)
C4—C3—C8—C7−0.3 (4)C18—C19—C20—C15−0.1 (3)
C2—C3—C8—C7177.6 (3)C18—C19—C20—C11−179.8 (2)
C2—N1—C9—C11−118.0 (2)C14—C15—C20—C19178.3 (2)
C2—N1—C9—C10121.9 (2)C16—C15—C20—C19−0.5 (3)
N1—C9—C11—C12−25.3 (3)C14—C15—C20—C11−2.0 (3)
C10—C9—C11—C1293.4 (2)C16—C15—C20—C11179.16 (18)
N1—C9—C11—C20157.71 (17)C12—C11—C20—C19−179.5 (2)
C10—C9—C11—C20−83.6 (2)C9—C11—C20—C19−2.5 (3)
C20—C11—C12—C131.1 (3)C12—C11—C20—C150.8 (3)
C9—C11—C12—C13−175.92 (19)C9—C11—C20—C15177.88 (17)
  4 in total

1.  Solvent-free organic synthesis.

Authors:  K Tanaka; F Toda
Journal:  Chem Rev       Date:  2000-03-08       Impact factor: 60.622

2.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

3.  (S)-(+)-1-(1-Naphth-yl)-1-(2-thienylmethyl-ene)ethyl-amine.

Authors:  Armando Espinosa Leija; Guadalupe Hernández; Roberto Portillo; René Gutiérrez; Sylvain Bernès
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-06-20

4.  Bis[4-(diphenyl-methyl-eneamino)phen-yl]methanone.

Authors:  Sylvain Bernès; Guadalupe Hernández; Roberto Portillo; Sandra Cruz; René Gutiérrez
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-05-12
  4 in total

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