| Literature DB >> 21582915 |
Armando Espinosa Leija, Guadalupe Hernández, Roberto Portillo, René Gutiérrez, Sylvain Bernès.
Abstract
The title chiral imine, C(17)H(15)NS, has been obtained via a direct synthesis route. The imine group displays the common E configuration, and is almost coplanar with the thio-phene heterocycle; the dihedral angle between the C=N-C group and the thio-phene ring is 5.1 (8)°. In contrast, the naphthyl group makes an angle of 83.79 (13)° with the thio-phene ring. The observed solid-state mol-ecular conformation is suitable for the use of this mol-ecule as an N,S-bidentate Schiff base ligand. The mol-ecular packing features double C-H⋯π inter-actions between naphthyl groups of neighboring mol-ecules, which form chains in the [100] direction. The crystal structure is further stabilized by a short C-H⋯π contact involving the methyl group and one ring of a naphthyl group. The resulting two-dimensional network is completed by a weak inter-molecular C-H(imine)⋯π(thio-phene) inter-action.Entities:
Year: 2009 PMID: 21582915 PMCID: PMC2969493 DOI: 10.1107/S1600536809022375
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C17H15NS | |
| Melting point: 345 K | |
| Orthorhombic, | Mo |
| Hall symbol: P 2ac 2ab | Cell parameters from 68 reflections |
| θ = 4.9–11.5° | |
| µ = 0.22 mm−1 | |
| Plate, colourless | |
| 0.50 × 0.36 × 0.04 mm | |
| Siemens P4 diffractometer | 1280 reflections with |
| Radiation source: fine-focus sealed tube | |
| graphite | θmax = 25.0°, θmin = 2.6° |
| ω scans | |
| Absorption correction: ψ scan ( | |
| 4462 measured reflections | 2 standard reflections every 48 reflections |
| 2446 independent reflections | intensity decay: 1.8% |
| Refinement on | Hydrogen site location: inferred from neighbouring sites |
| Least-squares matrix: full | H-atom parameters constrained |
| (Δ/σ)max < 0.001 | |
| Δρmax = 0.31 e Å−3 | |
| 2446 reflections | Δρmin = −0.39 e Å−3 |
| 174 parameters | Extinction correction: |
| 0 restraints | Extinction coefficient: 0.046 (6) |
| 0 constraints | Absolute structure: Flack (1983), 946 Friedel pairs |
| Primary atom site location: structure-invariant direct methods | Flack parameter: 0.2 (2) |
| Secondary atom site location: difference Fourier map |
| S1 | 0.0890 (3) | 0.77472 (18) | 0.23563 (4) | 0.0851 (5) | |
| C2 | 0.0387 (11) | 0.7930 (7) | 0.28848 (16) | 0.0838 (16) | |
| H2A | −0.0852 | 0.7377 | 0.3027 | 0.101* | |
| C3 | 0.1958 (10) | 0.8951 (7) | 0.30739 (17) | 0.0808 (16) | |
| H3A | 0.1920 | 0.9189 | 0.3363 | 0.097* | |
| C4 | 0.3675 (11) | 0.9631 (6) | 0.27948 (16) | 0.0765 (15) | |
| H4A | 0.4906 | 1.0359 | 0.2875 | 0.092* | |
| C5 | 0.3292 (8) | 0.9077 (6) | 0.23880 (16) | 0.0637 (12) | |
| C6 | 0.4666 (10) | 0.9518 (6) | 0.20103 (16) | 0.0709 (14) | |
| H6A | 0.5865 | 1.0331 | 0.2030 | 0.085* | |
| N7 | 0.4278 (8) | 0.8830 (5) | 0.16565 (12) | 0.0732 (11) | |
| C8 | 0.5830 (11) | 0.9318 (6) | 0.12949 (14) | 0.0743 (14) | |
| H8A | 0.6648 | 1.0374 | 0.1362 | 0.089* | |
| C9 | 0.7706 (10) | 0.7968 (8) | 0.12312 (17) | 0.0982 (19) | |
| H9A | 0.8835 | 0.7989 | 0.1462 | 0.147* | |
| H9B | 0.8550 | 0.8161 | 0.0970 | 0.147* | |
| H9C | 0.6924 | 0.6896 | 0.1221 | 0.147* | |
| C10 | 0.4174 (10) | 0.9587 (6) | 0.09162 (14) | 0.0679 (13) | |
| C11 | 0.3745 (10) | 0.8354 (6) | 0.06322 (15) | 0.0771 (14) | |
| H11A | 0.4564 | 0.7344 | 0.0662 | 0.093* | |
| C12 | 0.2109 (10) | 0.8542 (7) | 0.02938 (16) | 0.0837 (17) | |
| H12A | 0.1858 | 0.7662 | 0.0106 | 0.100* | |
| C13 | 0.0910 (12) | 0.9986 (7) | 0.02414 (17) | 0.0835 (16) | |
| H13A | −0.0180 | 1.0099 | 0.0019 | 0.100* | |
| C14 | 0.1289 (10) | 1.1329 (7) | 0.05212 (16) | 0.0757 (14) | |
| C15 | 0.0159 (12) | 1.2883 (8) | 0.04640 (19) | 0.101 (2) | |
| H15A | −0.0913 | 1.3014 | 0.0239 | 0.121* | |
| C16 | 0.0570 (16) | 1.4195 (9) | 0.0723 (2) | 0.110 (2) | |
| H16A | −0.0224 | 1.5205 | 0.0677 | 0.132* | |
| C17 | 0.2162 (13) | 1.4043 (8) | 0.1058 (2) | 0.0980 (19) | |
| H17A | 0.2446 | 1.4950 | 0.1236 | 0.118* | |
| C18 | 0.3321 (11) | 1.2564 (7) | 0.11269 (16) | 0.0850 (16) | |
| H18A | 0.4378 | 1.2477 | 0.1355 | 0.102* | |
| C19 | 0.2965 (10) | 1.1158 (6) | 0.08620 (14) | 0.0702 (14) |
| S1 | 0.0830 (9) | 0.0941 (10) | 0.0780 (9) | −0.0071 (9) | −0.0027 (8) | −0.0051 (8) |
| C2 | 0.092 (4) | 0.093 (4) | 0.066 (3) | 0.000 (4) | 0.010 (3) | 0.006 (3) |
| C3 | 0.093 (4) | 0.083 (4) | 0.067 (3) | 0.008 (4) | −0.008 (3) | −0.003 (3) |
| C4 | 0.085 (4) | 0.074 (3) | 0.071 (3) | −0.009 (3) | −0.001 (3) | −0.005 (3) |
| C5 | 0.058 (3) | 0.063 (3) | 0.070 (3) | −0.006 (2) | −0.003 (2) | −0.002 (3) |
| C6 | 0.069 (4) | 0.071 (3) | 0.073 (3) | −0.002 (3) | −0.005 (3) | 0.000 (3) |
| N7 | 0.075 (3) | 0.082 (3) | 0.062 (2) | 0.001 (3) | 0.003 (2) | 0.001 (2) |
| C8 | 0.078 (3) | 0.079 (3) | 0.066 (3) | 0.000 (3) | 0.003 (3) | 0.008 (3) |
| C9 | 0.086 (4) | 0.119 (5) | 0.090 (4) | 0.029 (4) | 0.004 (3) | 0.007 (4) |
| C10 | 0.073 (3) | 0.069 (3) | 0.062 (3) | 0.002 (3) | 0.001 (3) | 0.003 (3) |
| C11 | 0.089 (4) | 0.073 (3) | 0.070 (3) | 0.004 (3) | 0.001 (3) | −0.001 (3) |
| C12 | 0.091 (4) | 0.085 (4) | 0.076 (4) | −0.002 (4) | −0.003 (3) | −0.010 (3) |
| C13 | 0.088 (4) | 0.093 (4) | 0.070 (3) | −0.002 (4) | −0.007 (3) | 0.003 (3) |
| C14 | 0.077 (4) | 0.078 (3) | 0.072 (3) | 0.006 (3) | 0.002 (3) | 0.008 (3) |
| C15 | 0.117 (5) | 0.096 (4) | 0.090 (4) | 0.026 (4) | −0.006 (4) | 0.018 (4) |
| C16 | 0.134 (6) | 0.083 (4) | 0.112 (5) | 0.024 (5) | 0.014 (5) | 0.013 (4) |
| C17 | 0.117 (5) | 0.078 (4) | 0.099 (4) | 0.007 (4) | 0.017 (4) | −0.005 (4) |
| C18 | 0.097 (4) | 0.077 (4) | 0.081 (3) | −0.006 (4) | 0.009 (3) | −0.007 (3) |
| C19 | 0.077 (3) | 0.072 (3) | 0.062 (3) | −0.001 (3) | 0.006 (3) | 0.003 (3) |
| S1—C2 | 1.695 (5) | C10—C11 | 1.352 (6) |
| S1—C5 | 1.703 (5) | C10—C19 | 1.432 (6) |
| C2—C3 | 1.332 (7) | C11—C12 | 1.407 (7) |
| C2—H2A | 0.9300 | C11—H11A | 0.9300 |
| C3—C4 | 1.404 (7) | C12—C13 | 1.341 (7) |
| C3—H3A | 0.9300 | C12—H12A | 0.9300 |
| C4—C5 | 1.373 (6) | C13—C14 | 1.405 (7) |
| C4—H4A | 0.9300 | C13—H13A | 0.9300 |
| C5—C6 | 1.455 (6) | C14—C15 | 1.401 (7) |
| C6—N7 | 1.261 (5) | C14—C19 | 1.425 (7) |
| C6—H6A | 0.9300 | C15—C16 | 1.349 (7) |
| N7—C8 | 1.479 (6) | C15—H15A | 0.9300 |
| C8—C9 | 1.509 (7) | C16—C17 | 1.378 (9) |
| C8—C10 | 1.519 (7) | C16—H16A | 0.9300 |
| C8—H8A | 0.9800 | C17—C18 | 1.361 (8) |
| C9—H9A | 0.9600 | C17—H17A | 0.9300 |
| C9—H9B | 0.9600 | C18—C19 | 1.414 (6) |
| C9—H9C | 0.9600 | C18—H18A | 0.9300 |
| C2—S1—C5 | 91.0 (3) | C11—C10—C8 | 121.5 (5) |
| C3—C2—S1 | 112.7 (5) | C19—C10—C8 | 119.9 (4) |
| C3—C2—H2A | 123.7 | C10—C11—C12 | 122.5 (5) |
| S1—C2—H2A | 123.7 | C10—C11—H11A | 118.8 |
| C2—C3—C4 | 113.4 (5) | C12—C11—H11A | 118.8 |
| C2—C3—H3A | 123.3 | C13—C12—C11 | 120.2 (5) |
| C4—C3—H3A | 123.3 | C13—C12—H12A | 119.9 |
| C5—C4—C3 | 110.8 (5) | C11—C12—H12A | 119.9 |
| C5—C4—H4A | 124.6 | C12—C13—C14 | 120.4 (6) |
| C3—C4—H4A | 124.6 | C12—C13—H13A | 119.8 |
| C4—C5—C6 | 127.2 (4) | C14—C13—H13A | 119.8 |
| C4—C5—S1 | 112.1 (4) | C15—C14—C13 | 122.0 (5) |
| C6—C5—S1 | 120.6 (4) | C15—C14—C19 | 118.1 (5) |
| N7—C6—C5 | 121.9 (5) | C13—C14—C19 | 119.8 (5) |
| N7—C6—H6A | 119.0 | C16—C15—C14 | 122.4 (6) |
| C5—C6—H6A | 119.0 | C16—C15—H15A | 118.8 |
| C6—N7—C8 | 117.9 (4) | C14—C15—H15A | 118.8 |
| N7—C8—C9 | 108.2 (4) | C15—C16—C17 | 120.1 (6) |
| N7—C8—C10 | 107.0 (4) | C15—C16—H16A | 119.9 |
| C9—C8—C10 | 114.2 (4) | C17—C16—H16A | 119.9 |
| N7—C8—H8A | 109.1 | C18—C17—C16 | 119.9 (6) |
| C9—C8—H8A | 109.1 | C18—C17—H17A | 120.0 |
| C10—C8—H8A | 109.1 | C16—C17—H17A | 120.0 |
| C8—C9—H9A | 109.5 | C17—C18—C19 | 122.0 (6) |
| C8—C9—H9B | 109.5 | C17—C18—H18A | 119.0 |
| H9A—C9—H9B | 109.5 | C19—C18—H18A | 119.0 |
| C8—C9—H9C | 109.5 | C18—C19—C14 | 117.3 (5) |
| H9A—C9—H9C | 109.5 | C18—C19—C10 | 124.1 (5) |
| H9B—C9—H9C | 109.5 | C14—C19—C10 | 118.5 (5) |
| C11—C10—C19 | 118.5 (5) | ||
| C5—S1—C2—C3 | 0.2 (4) | C11—C12—C13—C14 | 0.6 (9) |
| S1—C2—C3—C4 | −0.4 (6) | C12—C13—C14—C15 | 176.8 (5) |
| C2—C3—C4—C5 | 0.5 (7) | C12—C13—C14—C19 | 0.2 (9) |
| C3—C4—C5—C6 | 179.1 (5) | C13—C14—C15—C16 | −177.9 (6) |
| C3—C4—C5—S1 | −0.4 (6) | C19—C14—C15—C16 | −1.3 (9) |
| C2—S1—C5—C4 | 0.1 (4) | C14—C15—C16—C17 | 0.5 (11) |
| C2—S1—C5—C6 | −179.4 (4) | C15—C16—C17—C18 | −0.1 (10) |
| C4—C5—C6—N7 | 174.2 (5) | C16—C17—C18—C19 | 0.6 (9) |
| S1—C5—C6—N7 | −6.4 (6) | C17—C18—C19—C14 | −1.4 (8) |
| C5—C6—N7—C8 | −177.8 (4) | C17—C18—C19—C10 | 178.7 (5) |
| C6—N7—C8—C9 | 101.4 (5) | C15—C14—C19—C18 | 1.7 (7) |
| C6—N7—C8—C10 | −135.0 (5) | C13—C14—C19—C18 | 178.4 (5) |
| N7—C8—C10—C11 | −94.5 (6) | C15—C14—C19—C10 | −178.5 (5) |
| C9—C8—C10—C11 | 25.3 (7) | C13—C14—C19—C10 | −1.7 (7) |
| N7—C8—C10—C19 | 83.5 (6) | C11—C10—C19—C18 | −177.6 (5) |
| C9—C8—C10—C19 | −156.7 (5) | C8—C10—C19—C18 | 4.3 (8) |
| C19—C10—C11—C12 | −1.9 (8) | C11—C10—C19—C14 | 2.5 (7) |
| C8—C10—C11—C12 | 176.1 (5) | C8—C10—C19—C14 | −175.5 (5) |
| C10—C11—C12—C13 | 0.3 (8) |
| H··· | ||||
| C9—H9B···CgAi | 0.96 | 2.85 | 3.682 (6) | 145 |
| C6—H6A···CgBii | 0.93 | 3.03 | 3.891 (5) | 155 |
| C13—H13A···CgCiii | 0.93 | 3.54 | 4.399 (6) | 155 |
| C15—H15A···CgAiii | 0.93 | 3.22 | 4.030 (6) | 147 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| C9—H9 | 0.96 | 2.85 | 3.682 (6) | 145 |
| C6—H6 | 0.93 | 3.03 | 3.891 (5) | 155 |
| C13—H13 | 0.93 | 3.54 | 4.399 (6) | 155 |
| C15—H15 | 0.93 | 3.22 | 4.030 (6) | 147 |
Symmetry codes: (i) ; (ii) ; (iii) . CgA is the centroid of ring C10–C14/C19, CgB is the centroid of the thiophene ring and CgC is the centroid of ring C14–C19.