Literature DB >> 21582915

(S)-(+)-1-(1-Naphth-yl)-1-(2-thienylmethyl-ene)ethyl-amine.

Armando Espinosa Leija, Guadalupe Hernández, Roberto Portillo, René Gutiérrez, Sylvain Bernès.   

Abstract

The title chiral imine, C(17)H(15)NS, has been obtained via a direct synthesis route. The imine group displays the common E configuration, and is almost coplanar with the thio-phene heterocycle; the dihedral angle between the C=N-C group and the thio-phene ring is 5.1 (8)°. In contrast, the naphthyl group makes an angle of 83.79 (13)° with the thio-phene ring. The observed solid-state mol-ecular conformation is suitable for the use of this mol-ecule as an N,S-bidentate Schiff base ligand. The mol-ecular packing features double C-H⋯π inter-actions between naphthyl groups of neighboring mol-ecules, which form chains in the [100] direction. The crystal structure is further stabilized by a short C-H⋯π contact involving the methyl group and one ring of a naphthyl group. The resulting two-dimensional network is completed by a weak inter-molecular C-H(imine)⋯π(thio-phene) inter-action.

Entities:  

Year:  2009        PMID: 21582915      PMCID: PMC2969493          DOI: 10.1107/S1600536809022375

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For background to direct synthesis, see: Tanaka & Toda (2000 ▶); Jeon et al. (2005 ▶); Tovar et al. (2007 ▶). For the configuration and conformation of imines derived from thio­phene, see: Arjona et al. (1986 ▶).

Experimental

Crystal data

C17H15NS M = 265.36 Orthorhombic, a = 5.5274 (14) Å b = 7.990 (2) Å c = 31.517 (8) Å V = 1392.0 (6) Å3 Z = 4 Mo Kα radiation μ = 0.22 mm−1 T = 298 K 0.50 × 0.36 × 0.04 mm

Data collection

Siemens P4 diffractometer Absorption correction: ψ scan (XSCANS; Siemens, 1996 ▶) T min = 0.802, T max = 0.991 4462 measured reflections 2446 independent reflections 1280 reflections with I > 2σ(I) R int = 0.045 2 standard reflections every 48 reflections intensity decay: 1.8%

Refinement

R[F 2 > 2σ(F 2)] = 0.059 wR(F 2) = 0.174 S = 1.56 2446 reflections 174 parameters H-atom parameters constrained Δρmax = 0.31 e Å−3 Δρmin = −0.39 e Å−3 Absolute structure: Flack (1983 ▶), 946 Friedel pairs Flack parameter: 0.2 (2) Data collection: XSCANS (Siemens, 1996 ▶); cell refinement: XSCANS; data reduction: XSCANS; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: Mercury (Macrae et al., 2006 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536809022375/wn2331sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809022375/wn2331Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C17H15NSDx = 1.266 Mg m3
Mr = 265.36Melting point: 345 K
Orthorhombic, P212121Mo Kα radiation, λ = 0.71073 Å
Hall symbol: P 2ac 2abCell parameters from 68 reflections
a = 5.5274 (14) Åθ = 4.9–11.5°
b = 7.990 (2) ŵ = 0.22 mm1
c = 31.517 (8) ÅT = 298 K
V = 1392.0 (6) Å3Plate, colourless
Z = 40.50 × 0.36 × 0.04 mm
F(000) = 560
Siemens P4 diffractometer1280 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.045
graphiteθmax = 25.0°, θmin = 2.6°
ω scansh = −6→6
Absorption correction: ψ scan (XSCANS; Siemens, 1996)k = −9→9
Tmin = 0.802, Tmax = 0.991l = −37→37
4462 measured reflections2 standard reflections every 48 reflections
2446 independent reflections intensity decay: 1.8%
Refinement on F2Hydrogen site location: inferred from neighbouring sites
Least-squares matrix: fullH-atom parameters constrained
R[F2 > 2σ(F2)] = 0.059w = 1/[σ2(Fo2) + (0.05P)2] where P = (Fo2 + 2Fc2)/3
wR(F2) = 0.174(Δ/σ)max < 0.001
S = 1.56Δρmax = 0.31 e Å3
2446 reflectionsΔρmin = −0.39 e Å3
174 parametersExtinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
0 restraintsExtinction coefficient: 0.046 (6)
0 constraintsAbsolute structure: Flack (1983), 946 Friedel pairs
Primary atom site location: structure-invariant direct methodsFlack parameter: 0.2 (2)
Secondary atom site location: difference Fourier map
xyzUiso*/Ueq
S10.0890 (3)0.77472 (18)0.23563 (4)0.0851 (5)
C20.0387 (11)0.7930 (7)0.28848 (16)0.0838 (16)
H2A−0.08520.73770.30270.101*
C30.1958 (10)0.8951 (7)0.30739 (17)0.0808 (16)
H3A0.19200.91890.33630.097*
C40.3675 (11)0.9631 (6)0.27948 (16)0.0765 (15)
H4A0.49061.03590.28750.092*
C50.3292 (8)0.9077 (6)0.23880 (16)0.0637 (12)
C60.4666 (10)0.9518 (6)0.20103 (16)0.0709 (14)
H6A0.58651.03310.20300.085*
N70.4278 (8)0.8830 (5)0.16565 (12)0.0732 (11)
C80.5830 (11)0.9318 (6)0.12949 (14)0.0743 (14)
H8A0.66481.03740.13620.089*
C90.7706 (10)0.7968 (8)0.12312 (17)0.0982 (19)
H9A0.88350.79890.14620.147*
H9B0.85500.81610.09700.147*
H9C0.69240.68960.12210.147*
C100.4174 (10)0.9587 (6)0.09162 (14)0.0679 (13)
C110.3745 (10)0.8354 (6)0.06322 (15)0.0771 (14)
H11A0.45640.73440.06620.093*
C120.2109 (10)0.8542 (7)0.02938 (16)0.0837 (17)
H12A0.18580.76620.01060.100*
C130.0910 (12)0.9986 (7)0.02414 (17)0.0835 (16)
H13A−0.01801.00990.00190.100*
C140.1289 (10)1.1329 (7)0.05212 (16)0.0757 (14)
C150.0159 (12)1.2883 (8)0.04640 (19)0.101 (2)
H15A−0.09131.30140.02390.121*
C160.0570 (16)1.4195 (9)0.0723 (2)0.110 (2)
H16A−0.02241.52050.06770.132*
C170.2162 (13)1.4043 (8)0.1058 (2)0.0980 (19)
H17A0.24461.49500.12360.118*
C180.3321 (11)1.2564 (7)0.11269 (16)0.0850 (16)
H18A0.43781.24770.13550.102*
C190.2965 (10)1.1158 (6)0.08620 (14)0.0702 (14)
U11U22U33U12U13U23
S10.0830 (9)0.0941 (10)0.0780 (9)−0.0071 (9)−0.0027 (8)−0.0051 (8)
C20.092 (4)0.093 (4)0.066 (3)0.000 (4)0.010 (3)0.006 (3)
C30.093 (4)0.083 (4)0.067 (3)0.008 (4)−0.008 (3)−0.003 (3)
C40.085 (4)0.074 (3)0.071 (3)−0.009 (3)−0.001 (3)−0.005 (3)
C50.058 (3)0.063 (3)0.070 (3)−0.006 (2)−0.003 (2)−0.002 (3)
C60.069 (4)0.071 (3)0.073 (3)−0.002 (3)−0.005 (3)0.000 (3)
N70.075 (3)0.082 (3)0.062 (2)0.001 (3)0.003 (2)0.001 (2)
C80.078 (3)0.079 (3)0.066 (3)0.000 (3)0.003 (3)0.008 (3)
C90.086 (4)0.119 (5)0.090 (4)0.029 (4)0.004 (3)0.007 (4)
C100.073 (3)0.069 (3)0.062 (3)0.002 (3)0.001 (3)0.003 (3)
C110.089 (4)0.073 (3)0.070 (3)0.004 (3)0.001 (3)−0.001 (3)
C120.091 (4)0.085 (4)0.076 (4)−0.002 (4)−0.003 (3)−0.010 (3)
C130.088 (4)0.093 (4)0.070 (3)−0.002 (4)−0.007 (3)0.003 (3)
C140.077 (4)0.078 (3)0.072 (3)0.006 (3)0.002 (3)0.008 (3)
C150.117 (5)0.096 (4)0.090 (4)0.026 (4)−0.006 (4)0.018 (4)
C160.134 (6)0.083 (4)0.112 (5)0.024 (5)0.014 (5)0.013 (4)
C170.117 (5)0.078 (4)0.099 (4)0.007 (4)0.017 (4)−0.005 (4)
C180.097 (4)0.077 (4)0.081 (3)−0.006 (4)0.009 (3)−0.007 (3)
C190.077 (3)0.072 (3)0.062 (3)−0.001 (3)0.006 (3)0.003 (3)
S1—C21.695 (5)C10—C111.352 (6)
S1—C51.703 (5)C10—C191.432 (6)
C2—C31.332 (7)C11—C121.407 (7)
C2—H2A0.9300C11—H11A0.9300
C3—C41.404 (7)C12—C131.341 (7)
C3—H3A0.9300C12—H12A0.9300
C4—C51.373 (6)C13—C141.405 (7)
C4—H4A0.9300C13—H13A0.9300
C5—C61.455 (6)C14—C151.401 (7)
C6—N71.261 (5)C14—C191.425 (7)
C6—H6A0.9300C15—C161.349 (7)
N7—C81.479 (6)C15—H15A0.9300
C8—C91.509 (7)C16—C171.378 (9)
C8—C101.519 (7)C16—H16A0.9300
C8—H8A0.9800C17—C181.361 (8)
C9—H9A0.9600C17—H17A0.9300
C9—H9B0.9600C18—C191.414 (6)
C9—H9C0.9600C18—H18A0.9300
C2—S1—C591.0 (3)C11—C10—C8121.5 (5)
C3—C2—S1112.7 (5)C19—C10—C8119.9 (4)
C3—C2—H2A123.7C10—C11—C12122.5 (5)
S1—C2—H2A123.7C10—C11—H11A118.8
C2—C3—C4113.4 (5)C12—C11—H11A118.8
C2—C3—H3A123.3C13—C12—C11120.2 (5)
C4—C3—H3A123.3C13—C12—H12A119.9
C5—C4—C3110.8 (5)C11—C12—H12A119.9
C5—C4—H4A124.6C12—C13—C14120.4 (6)
C3—C4—H4A124.6C12—C13—H13A119.8
C4—C5—C6127.2 (4)C14—C13—H13A119.8
C4—C5—S1112.1 (4)C15—C14—C13122.0 (5)
C6—C5—S1120.6 (4)C15—C14—C19118.1 (5)
N7—C6—C5121.9 (5)C13—C14—C19119.8 (5)
N7—C6—H6A119.0C16—C15—C14122.4 (6)
C5—C6—H6A119.0C16—C15—H15A118.8
C6—N7—C8117.9 (4)C14—C15—H15A118.8
N7—C8—C9108.2 (4)C15—C16—C17120.1 (6)
N7—C8—C10107.0 (4)C15—C16—H16A119.9
C9—C8—C10114.2 (4)C17—C16—H16A119.9
N7—C8—H8A109.1C18—C17—C16119.9 (6)
C9—C8—H8A109.1C18—C17—H17A120.0
C10—C8—H8A109.1C16—C17—H17A120.0
C8—C9—H9A109.5C17—C18—C19122.0 (6)
C8—C9—H9B109.5C17—C18—H18A119.0
H9A—C9—H9B109.5C19—C18—H18A119.0
C8—C9—H9C109.5C18—C19—C14117.3 (5)
H9A—C9—H9C109.5C18—C19—C10124.1 (5)
H9B—C9—H9C109.5C14—C19—C10118.5 (5)
C11—C10—C19118.5 (5)
C5—S1—C2—C30.2 (4)C11—C12—C13—C140.6 (9)
S1—C2—C3—C4−0.4 (6)C12—C13—C14—C15176.8 (5)
C2—C3—C4—C50.5 (7)C12—C13—C14—C190.2 (9)
C3—C4—C5—C6179.1 (5)C13—C14—C15—C16−177.9 (6)
C3—C4—C5—S1−0.4 (6)C19—C14—C15—C16−1.3 (9)
C2—S1—C5—C40.1 (4)C14—C15—C16—C170.5 (11)
C2—S1—C5—C6−179.4 (4)C15—C16—C17—C18−0.1 (10)
C4—C5—C6—N7174.2 (5)C16—C17—C18—C190.6 (9)
S1—C5—C6—N7−6.4 (6)C17—C18—C19—C14−1.4 (8)
C5—C6—N7—C8−177.8 (4)C17—C18—C19—C10178.7 (5)
C6—N7—C8—C9101.4 (5)C15—C14—C19—C181.7 (7)
C6—N7—C8—C10−135.0 (5)C13—C14—C19—C18178.4 (5)
N7—C8—C10—C11−94.5 (6)C15—C14—C19—C10−178.5 (5)
C9—C8—C10—C1125.3 (7)C13—C14—C19—C10−1.7 (7)
N7—C8—C10—C1983.5 (6)C11—C10—C19—C18−177.6 (5)
C9—C8—C10—C19−156.7 (5)C8—C10—C19—C184.3 (8)
C19—C10—C11—C12−1.9 (8)C11—C10—C19—C142.5 (7)
C8—C10—C11—C12176.1 (5)C8—C10—C19—C14−175.5 (5)
C10—C11—C12—C130.3 (8)
D—H···AD—HH···AD···AD—H···A
C9—H9B···CgAi0.962.853.682 (6)145
C6—H6A···CgBii0.933.033.891 (5)155
C13—H13A···CgCiii0.933.544.399 (6)155
C15—H15A···CgAiii0.933.224.030 (6)147
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C9—H9B⋯CgAi0.962.853.682 (6)145
C6—H6A⋯CgBii0.933.033.891 (5)155
C13—H13A⋯CgCiii0.933.544.399 (6)155
C15—H15A⋯CgAiii0.933.224.030 (6)147

Symmetry codes: (i) ; (ii) ; (iii) . CgA is the centroid of ring C10–C14/C19, CgB is the centroid of the thio­phene ring and CgC is the centroid of ring C14–C19.

  3 in total

1.  Solvent-free organic synthesis.

Authors:  K Tanaka; F Toda
Journal:  Chem Rev       Date:  2000-03-08       Impact factor: 60.622

2.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

3.  A green chemistry approach to a more efficient asymmetric catalyst: solvent-free and highly concentrated alkyl additions to ketones.

Authors:  Sang-Jin Jeon; Hongmei Li; Patrick J Walsh
Journal:  J Am Chem Soc       Date:  2005-11-30       Impact factor: 15.419

  3 in total
  1 in total

1.  (S)-(+)-N-Benzyl-idene-1-(1-naphth-yl)ethyl-amine.

Authors:  Sylvain Bernès; Guadalupe Hernández; Jaime Vázquez; Alejandra Tovar; René Gutiérrez
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-04-29
  1 in total

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