Literature DB >> 21754487

Diethyl 4,6-diacetamido-isophthalate.

Peishen Li1, Xianghui Li, Chao Chen, Lihua Yuan, Wen Feng.   

Abstract

In the title compound, C(16)H(20)N(2)O(6), two intra-molecular N-H⋯O hydrogen bonds occur, in which the carbonyl O atoms of the ethyl acetate groups serve as the acceptor atoms; both motifs generate S(6) rings. In the crystal, mol-ecules are linked by weak C-H⋯O links (with the acceptor O atoms part of the amide groups), generating [001] chains.

Entities:  

Year:  2011        PMID: 21754487      PMCID: PMC3089246          DOI: 10.1107/S1600536811013845

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For background to intra­molecular hydrogen bonds this class of compound, see: Zhu et al. (2000 ▶); Yuan et al. (2004 ▶); Feng et al. (2009 ▶); Yan et al. (2010 ▶); Zhang et al. (2008 ▶). For a related structure, see: Zhang et al. (2006 ▶).

Experimental

Crystal data

C16H20N2O6 M = 336.34 Triclinic, a = 7.951 (3) Å b = 10.249 (3) Å c = 11.109 (4) Å α = 76.70 (3)° β = 77.42 (3)° γ = 76.50 (2)° V = 843.7 (5) Å3 Z = 2 Mo Kα radiation μ = 0.10 mm−1 T = 292 K 0.50 × 0.46 × 0.40 mm

Data collection

Enraf–Nonius CAD-4 diffractometer 3149 measured reflections 3094 independent reflections 1826 reflections with I > 2σ(I) R int = 0.004 3 standard reflections every 150 reflections intensity decay: 4.5%

Refinement

R[F 2 > 2σ(F 2)] = 0.079 wR(F 2) = 0.268 S = 1.09 3094 reflections 223 parameters 4 restraints H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.59 e Å−3 Δρmin = −0.65 e Å−3 Data collection: DIFRAC (Gabe et al., 1993 ▶); cell refinement: DIFRAC; data reduction: NRCVAX (Gabe et al., 1989 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 1997 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536811013845/hb5828sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536811013845/hb5828Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C16H20N2O6Z = 2
Mr = 336.34F(000) = 356
Triclinic, P1Dx = 1.324 Mg m3
a = 7.951 (3) ÅMo Kα radiation, λ = 0.71073 Å
b = 10.249 (3) ÅCell parameters from 20 reflections
c = 11.109 (4) Åθ = 5.4–6.7°
α = 76.70 (3)°µ = 0.10 mm1
β = 77.42 (3)°T = 292 K
γ = 76.50 (2)°Block, colourless
V = 843.7 (5) Å30.50 × 0.46 × 0.40 mm
Enraf–Nonius CAD-4 diffractometerRint = 0.004
Radiation source: fine-focus sealed tubeθmax = 25.5°, θmin = 1.9°
graphiteh = −9→9
ω/2θ scansk = −1→12
3149 measured reflectionsl = −12→13
3094 independent reflections3 standard reflections every 150 reflections
1826 reflections with I > 2σ(I) intensity decay: 4.5%
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.079Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.268H atoms treated by a mixture of independent and constrained refinement
S = 1.09w = 1/[σ2(Fo2) + (0.1639P)2 + 0.1078P] where P = (Fo2 + 2Fc2)/3
3094 reflections(Δ/σ)max < 0.001
223 parametersΔρmax = 0.59 e Å3
4 restraintsΔρmin = −0.65 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O10.9467 (4)−0.1465 (3)0.6464 (2)0.0692 (9)
O21.1334 (4)−0.2976 (3)0.7586 (2)0.0706 (9)
O31.0473 (5)−0.3487 (3)1.2179 (3)0.0988 (12)
O40.7415 (4)−0.0447 (3)1.3243 (3)0.0796 (9)
O50.5572 (4)0.2164 (3)0.7774 (3)0.0692 (8)
O60.5009 (4)0.2628 (3)0.9676 (3)0.0718 (8)
N11.0637 (4)−0.3063 (3)1.0068 (3)0.0503 (8)
H1N1.113 (4)−0.338 (4)0.938 (3)0.046 (9)*
N20.6413 (4)0.0776 (3)1.1468 (3)0.0514 (8)
H2N0.581 (5)0.150 (4)1.120 (3)0.044 (10)*
C10.9150 (4)−0.1332 (4)0.8583 (3)0.0477 (8)
C20.9442 (4)−0.1847 (3)0.9824 (3)0.0427 (8)
C30.8541 (4)−0.1138 (3)1.0777 (3)0.0440 (8)
H30.8745−0.14771.15940.053*
C40.7336 (4)0.0075 (3)1.0518 (3)0.0413 (8)
C50.7021 (4)0.0591 (3)0.9291 (3)0.0449 (8)
C60.7941 (4)−0.0127 (3)0.8356 (3)0.0460 (8)
H60.77360.02160.75390.055*
C71.0103 (5)−0.2022 (4)0.7527 (3)0.0539 (9)
C81.0398 (7)−0.1987 (5)0.5319 (4)0.0871 (15)
H8A1.1655−0.21920.53100.104*
H8B1.0160−0.13030.45810.104*
C90.9772 (8)−0.3269 (6)0.5304 (5)0.1008 (17)
H9A1.0175−0.39870.59610.151*
H9B1.0233−0.35430.45070.151*
H9C0.8512−0.30900.54340.151*
C101.1082 (5)−0.3819 (4)1.1169 (4)0.0574 (10)
C111.2385 (6)−0.5100 (4)1.1039 (4)0.0680 (11)
H11A1.2382−0.56961.18440.102*
H11B1.3533−0.48881.07220.102*
H11C1.2081−0.55441.04660.102*
C120.6424 (5)0.0486 (4)1.2735 (3)0.0544 (9)
C130.5091 (6)0.1480 (5)1.3433 (4)0.0723 (12)
H13A0.39510.15301.32490.108*
H13B0.53990.23671.31770.108*
H13C0.50730.11771.43200.108*
C140.5778 (5)0.1888 (4)0.8965 (4)0.0531 (9)
C150.4366 (9)0.3443 (6)0.7425 (5)0.1109 (14)
H15A0.48480.42160.74630.133*
H15B0.32450.34650.79870.133*
C160.4146 (9)0.3488 (6)0.6092 (5)0.1109 (14)
H16A0.37960.26660.60510.166*
H16B0.52390.35650.55340.166*
H16C0.32620.42630.58480.166*
U11U22U33U12U13U23
O10.0823 (19)0.0772 (19)0.0456 (15)0.0082 (15)−0.0164 (13)−0.0255 (13)
O20.0655 (17)0.0820 (19)0.0598 (17)0.0178 (15)−0.0127 (13)−0.0357 (14)
O30.130 (3)0.084 (2)0.0577 (19)0.040 (2)−0.0244 (18)−0.0185 (16)
O40.094 (2)0.082 (2)0.0529 (16)0.0193 (18)−0.0208 (15)−0.0222 (14)
O50.0774 (19)0.0613 (16)0.0625 (17)0.0094 (14)−0.0272 (14)−0.0076 (13)
O60.083 (2)0.0520 (15)0.0749 (19)0.0166 (14)−0.0225 (15)−0.0227 (14)
N10.0532 (17)0.0460 (16)0.0500 (17)0.0046 (13)−0.0107 (14)−0.0184 (13)
N20.0526 (18)0.0501 (18)0.0507 (18)0.0036 (15)−0.0115 (14)−0.0189 (14)
C10.0476 (19)0.0513 (19)0.0465 (19)−0.0098 (16)−0.0054 (15)−0.0161 (15)
C20.0392 (17)0.0438 (17)0.0469 (18)−0.0060 (14)−0.0068 (14)−0.0147 (14)
C30.0455 (18)0.0449 (18)0.0428 (18)−0.0052 (15)−0.0074 (14)−0.0147 (14)
C40.0353 (16)0.0430 (17)0.0480 (18)−0.0066 (14)−0.0029 (13)−0.0182 (14)
C50.0436 (18)0.0433 (18)0.0492 (19)−0.0035 (15)−0.0102 (15)−0.0143 (15)
C60.0485 (19)0.0480 (18)0.0430 (17)−0.0067 (15)−0.0100 (14)−0.0120 (14)
C70.055 (2)0.058 (2)0.051 (2)−0.0040 (18)−0.0062 (16)−0.0240 (17)
C80.105 (4)0.096 (3)0.054 (2)0.007 (3)−0.009 (2)−0.032 (2)
C90.121 (4)0.107 (4)0.081 (3)0.002 (3)−0.026 (3)−0.048 (3)
C100.058 (2)0.051 (2)0.062 (2)0.0021 (17)−0.0145 (18)−0.0186 (18)
C110.076 (3)0.048 (2)0.077 (3)0.0043 (19)−0.021 (2)−0.0148 (19)
C120.056 (2)0.060 (2)0.050 (2)−0.0067 (18)−0.0058 (17)−0.0237 (17)
C130.071 (3)0.081 (3)0.063 (2)0.005 (2)−0.005 (2)−0.035 (2)
C140.058 (2)0.0453 (19)0.058 (2)−0.0045 (17)−0.0150 (17)−0.0146 (16)
C150.130 (3)0.087 (3)0.103 (3)0.021 (2)−0.050 (3)−0.008 (2)
C160.130 (3)0.087 (3)0.103 (3)0.021 (2)−0.050 (3)−0.008 (2)
O1—C71.338 (4)C5—C141.482 (5)
O1—C81.474 (5)C6—H60.9300
O2—C71.212 (4)C8—C91.514 (6)
O3—C101.212 (5)C8—H8A0.9700
O4—C121.204 (5)C8—H8B0.9700
O5—C141.326 (4)C9—H9A0.9600
O5—C151.459 (5)C9—H9B0.9600
O6—C141.192 (4)C9—H9C0.9600
N1—C101.359 (5)C10—C111.485 (5)
N1—C21.390 (4)C11—H11A0.9600
N1—H1N0.88 (4)C11—H11B0.9600
N2—C121.371 (5)C11—H11C0.9600
N2—C41.391 (4)C12—C131.505 (5)
N2—H2N0.81 (4)C13—H13A0.9600
C1—C61.386 (5)C13—H13B0.9600
C1—C21.408 (5)C13—H13C0.9600
C1—C71.482 (5)C15—C161.517 (7)
C2—C31.393 (4)C15—H15A0.9700
C3—C41.395 (4)C15—H15B0.9700
C3—H30.9300C16—H16A0.9600
C4—C51.398 (5)C16—H16B0.9600
C5—C61.388 (4)C16—H16C0.9600
C7—O1—C8117.5 (3)H9A—C9—H9B109.5
C14—O5—C15114.2 (3)C8—C9—H9C109.5
C10—N1—C2130.8 (3)H9A—C9—H9C109.5
C10—N1—H1N117 (2)H9B—C9—H9C109.5
C2—N1—H1N112 (2)O3—C10—N1123.3 (3)
C12—N2—C4131.2 (3)O3—C10—C11122.3 (4)
C12—N2—H2N116 (3)N1—C10—C11114.4 (3)
C4—N2—H2N112 (3)C10—C11—H11A109.5
C6—C1—C2118.0 (3)C10—C11—H11B109.5
C6—C1—C7119.7 (3)H11A—C11—H11B109.5
C2—C1—C7122.3 (3)C10—C11—H11C109.5
N1—C2—C3121.5 (3)H11A—C11—H11C109.5
N1—C2—C1118.7 (3)H11B—C11—H11C109.5
C3—C2—C1119.9 (3)O4—C12—N2124.0 (3)
C2—C3—C4120.7 (3)O4—C12—C13122.9 (4)
C2—C3—H3119.6N2—C12—C13113.1 (3)
C4—C3—H3119.6C12—C13—H13A109.5
N2—C4—C3121.0 (3)C12—C13—H13B109.5
N2—C4—C5119.0 (3)H13A—C13—H13B109.5
C3—C4—C5120.0 (3)C12—C13—H13C109.5
C6—C5—C4118.3 (3)H13A—C13—H13C109.5
C6—C5—C14119.7 (3)H13B—C13—H13C109.5
C4—C5—C14122.0 (3)O6—C14—O5121.7 (3)
C1—C6—C5123.0 (3)O6—C14—C5125.2 (3)
C1—C6—H6118.5O5—C14—C5113.1 (3)
C5—C6—H6118.5O5—C15—C16106.1 (4)
O2—C7—O1122.4 (3)O5—C15—H15A110.5
O2—C7—C1125.2 (3)C16—C15—H15A110.5
O1—C7—C1112.4 (3)O5—C15—H15B110.5
O1—C8—C9108.6 (4)C16—C15—H15B110.5
O1—C8—H8A110.0H15A—C15—H15B108.7
C9—C8—H8A110.0C15—C16—H16A109.5
O1—C8—H8B110.0C15—C16—H16B109.5
C9—C8—H8B110.0H16A—C16—H16B109.5
H8A—C8—H8B108.3C15—C16—H16C109.5
C8—C9—H9A109.5H16A—C16—H16C109.5
C8—C9—H9B109.5H16B—C16—H16C109.5
C10—N1—C2—C34.6 (6)C14—C5—C6—C1178.7 (3)
C10—N1—C2—C1−175.5 (3)C8—O1—C7—O2−4.3 (6)
C6—C1—C2—N1179.3 (3)C8—O1—C7—C1175.0 (3)
C7—C1—C2—N1−1.5 (5)C6—C1—C7—O2170.3 (4)
C6—C1—C2—C3−0.8 (5)C2—C1—C7—O2−8.9 (6)
C7—C1—C2—C3178.4 (3)C6—C1—C7—O1−9.1 (5)
N1—C2—C3—C4−179.5 (3)C2—C1—C7—O1171.8 (3)
C1—C2—C3—C40.6 (5)C7—O1—C8—C983.1 (5)
C12—N2—C4—C3−1.0 (6)C2—N1—C10—O3−2.1 (7)
C12—N2—C4—C5178.0 (3)C2—N1—C10—C11177.7 (3)
C2—C3—C4—N2179.0 (3)C4—N2—C12—O46.1 (7)
C2—C3—C4—C50.0 (5)C4—N2—C12—C13−175.2 (3)
N2—C4—C5—C6−179.4 (3)C15—O5—C14—O61.0 (6)
C3—C4—C5—C6−0.4 (5)C15—O5—C14—C5−179.4 (4)
N2—C4—C5—C142.1 (5)C6—C5—C14—O6−174.9 (4)
C3—C4—C5—C14−178.9 (3)C4—C5—C14—O63.6 (6)
C2—C1—C6—C50.4 (5)C6—C5—C14—O55.6 (5)
C7—C1—C6—C5−178.8 (3)C4—C5—C14—O5−176.0 (3)
C4—C5—C6—C10.2 (5)C14—O5—C15—C16−173.5 (4)
D—H···AD—HH···AD···AD—H···A
N1—H1N···O20.88 (4)1.92 (3)2.676 (4)144 (3)
N2—H2N···O60.81 (4)1.96 (4)2.656 (4)143 (3)
C9—H9B···O3i0.962.543.445 (6)157
C16—H16A···O4ii0.962.573.485 (7)160
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N1—H1N⋯O20.88 (4)1.92 (3)2.676 (4)144 (3)
N2—H2N⋯O60.81 (4)1.96 (4)2.656 (4)143 (3)
C9—H9B⋯O3i0.962.543.445 (6)157
C16—H16A⋯O4ii0.962.573.485 (7)160

Symmetry codes: (i) ; (ii) .

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