Literature DB >> 21754251

(3aR,6S,7aR)-7a-Bromo-2-[(4-methyl-phen-yl)sulfon-yl]-1,2,3,6,7,7a-hexa-hydro-3a,6-ep-oxy-isoindole.

Başak Koşar, Aydın Demircan, Hakan Arslan, Orhan Büyükgüngör.   

Abstract

In the title compound, C(15)H(16)BrNO(3)S, the boat form of the six-membered ring is almost symmetrical with respect to the ep-oxy bridge. The two five-membered rings generated by the ep-oxy bridge of the six-membered ring adopt envelope conformations, whereas the N-containing five-membered ring adopts a twisted conformation. In the crystal, mol-ecules are linked by C-H⋯O hydrogen bonds.

Entities:  

Year:  2011        PMID: 21754251      PMCID: PMC3099917          DOI: 10.1107/S1600536811010750

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For general background to intra­molecular Diels–Alder reactions and heteroaromatic Diels–Alder reactions, see: Dell (1998 ▶); Kappe et al. (1997 ▶); Arai et al. (2010 ▶); Lohse & Hsung (2009 ▶). For related structures, see: Koşar et al. (2006 ▶, 2007a ▶,b ▶). For the synthesis of the title compound and related compounds, see: Carlini et al. (1997 ▶); Hart et al. (1997 ▶); Shing et al. (1996 ▶); Karaarslan et al. (2007 ▶); Pontén & Magnusson (1997 ▶); Demircan et al. (2006 ▶); Arslan & Demircan (2008 ▶); Demircan & Parsons (1998 ▶). For puckering analysis, see: Cremer & Pople (1975 ▶).

Experimental

Crystal data

C15n class="CellLine">H16BrNO3S M = 370.26 Monoclinic, a = 16.5136 (6) Å b = 6.2186 (3) Å c = 16.3487 (7) Å β = 113.802 (3)° V = 1536.07 (12) Å3 Z = 4 Mo Kα radiation μ = 2.82 mm−1 T = 296 K 0.58 × 0.44 × 0.31 mm

Data collection

STOE IPDS 2 CCD diffractometer Absorption correction: integration (X-RED32; Stoe & Cie, 2002 ▶) T min = 0.310, T max = 0.495 7305 measured reflections 3163 independent reflections 2353 reflections with I > 2σ(I) R int = 0.042

Refinement

R[F 2 > 2σ(F 2)] = 0.048 wR(F 2) = 0.126 S = 1.07 3163 reflections 190 parameters H-atom parameters constrained Δρmax = 0.40 e Å−3 Δρmin = −0.44 e Å−3 Data collection: X-AREA (Stoe & Cie, 2002 ▶); cell refinement: X-AREA; data reduction: X-RED32 (Stoe & Cie, 2002 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: OLEX2 (Dolomanov et al., 2009 ▶); software used to prepare material for publication: SHELXTL (Sheldrick, 2008 ▶), OLEX2, publCIF (Westrip, 2010 ▶) and Mercury (Macrae et al., 2006 ▶). Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536811010750/zl2354sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536811010750/zl2354Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C15H16BrNO3SF(000) = 752
Mr = 370.26Dx = 1.601 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71069 Å
Hall symbol: -P 2ybcCell parameters from 10108 reflections
a = 16.5136 (6) Åθ = 1.5–28.0°
b = 6.2186 (3) ŵ = 2.82 mm1
c = 16.3487 (7) ÅT = 296 K
β = 113.802 (3)°Prism, colourless
V = 1536.07 (12) Å30.58 × 0.44 × 0.31 mm
Z = 4
STOE IPDS 2 CCD diffractometer3163 independent reflections
Radiation source: fine-focus sealed tube2353 reflections with I > 2σ(I)
plane graphiteRint = 0.042
Detector resolution: 6.67 pixels mm-1θmax = 26.5°, θmin = 2.5°
rotation method scansh = −20→20
Absorption correction: integration (X-RED32; Stoe & Cie, 2002)k = −7→7
Tmin = 0.310, Tmax = 0.495l = −20→20
7305 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.048Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.126H-atom parameters constrained
S = 1.07w = 1/[σ2(Fo2) + (0.0617P)2 + 0.5082P] where P = (Fo2 + 2Fc2)/3
3163 reflections(Δ/σ)max < 0.001
190 parametersΔρmax = 0.40 e Å3
0 restraintsΔρmin = −0.44 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C10.9623 (3)0.6757 (7)0.0923 (3)0.0640 (11)
H11.02110.71740.09660.077*
C20.9042 (3)0.5742 (8)0.0062 (3)0.0681 (12)
H20.90820.5913−0.04850.082*
C30.8459 (3)0.4559 (7)0.0218 (3)0.0617 (10)
H30.80130.3717−0.01890.074*
C40.8668 (3)0.4857 (6)0.1192 (3)0.0537 (9)
C50.8358 (3)0.3394 (6)0.1725 (3)0.0642 (11)
H5A0.77650.28750.13720.077*
H5B0.87530.21720.19450.077*
C60.8569 (3)0.7032 (6)0.2354 (3)0.0519 (9)
H6A0.91700.74000.27520.062*
H6B0.81630.79840.24720.062*
C70.8443 (3)0.7184 (6)0.1376 (3)0.0489 (8)
C80.9107 (3)0.8549 (7)0.1161 (3)0.0571 (10)
H8A0.94880.93800.16740.069*
H8B0.88120.95060.06600.069*
C90.6718 (3)0.5012 (6)0.2434 (3)0.0526 (9)
C100.6473 (3)0.7028 (7)0.2619 (3)0.0617 (10)
H100.68690.78520.30820.074*
C110.5636 (4)0.7800 (8)0.2109 (4)0.0736 (13)
H110.54730.91490.22360.088*
C120.5033 (3)0.6607 (9)0.1410 (3)0.0724 (12)
C130.5291 (3)0.4605 (9)0.1249 (3)0.0725 (12)
H130.48910.37770.07900.087*
C140.6117 (3)0.3787 (7)0.1743 (3)0.0627 (11)
H140.62730.24290.16170.075*
C150.4125 (5)0.7472 (12)0.0862 (5)0.117 (2)
H15A0.38020.64480.04080.175*
H15B0.41750.87990.05860.175*
H15C0.38180.77220.12420.175*
N10.8373 (2)0.4748 (5)0.2466 (2)0.0526 (8)
O10.96199 (18)0.5098 (4)0.15645 (19)0.0589 (7)
O20.8163 (2)0.5198 (5)0.38595 (19)0.0729 (8)
O30.7776 (2)0.1766 (5)0.3018 (2)0.0707 (8)
S10.78021 (8)0.40698 (16)0.30290 (6)0.0559 (3)
Br10.71982 (3)0.78750 (8)0.06223 (3)0.06777 (18)
U11U22U33U12U13U23
C10.060 (3)0.068 (3)0.066 (3)0.007 (2)0.028 (2)0.000 (2)
C20.082 (3)0.067 (3)0.057 (2)0.019 (2)0.030 (2)−0.001 (2)
C30.072 (3)0.057 (2)0.055 (2)0.006 (2)0.024 (2)−0.0128 (19)
C40.058 (2)0.043 (2)0.054 (2)0.0055 (17)0.0174 (19)−0.0063 (17)
C50.088 (3)0.041 (2)0.069 (3)−0.003 (2)0.038 (3)−0.0124 (19)
C60.062 (2)0.0406 (19)0.053 (2)−0.0077 (17)0.0232 (19)−0.0103 (17)
C70.050 (2)0.0403 (18)0.052 (2)0.0033 (16)0.0160 (17)−0.0051 (16)
C80.064 (3)0.047 (2)0.061 (2)0.0017 (18)0.026 (2)−0.0006 (18)
C90.064 (2)0.044 (2)0.054 (2)−0.0029 (18)0.029 (2)0.0008 (17)
C100.069 (3)0.052 (2)0.067 (3)−0.002 (2)0.031 (2)−0.008 (2)
C110.084 (3)0.059 (3)0.090 (3)0.013 (2)0.048 (3)0.003 (2)
C120.063 (3)0.083 (3)0.073 (3)0.007 (2)0.030 (2)0.004 (3)
C130.066 (3)0.078 (3)0.069 (3)−0.011 (2)0.022 (2)−0.009 (2)
C140.068 (3)0.052 (2)0.069 (3)−0.006 (2)0.029 (2)−0.008 (2)
C150.087 (4)0.140 (6)0.113 (5)0.038 (4)0.029 (4)0.004 (4)
N10.065 (2)0.0388 (16)0.0541 (18)0.0059 (14)0.0239 (16)−0.0009 (13)
O10.0538 (16)0.0582 (17)0.0582 (16)0.0158 (13)0.0159 (13)0.0002 (13)
O20.092 (2)0.077 (2)0.0429 (14)−0.0032 (18)0.0201 (15)−0.0060 (14)
O30.089 (2)0.0489 (17)0.0693 (19)0.0038 (15)0.0267 (18)0.0154 (14)
S10.0708 (7)0.0462 (5)0.0474 (5)0.0020 (4)0.0203 (5)0.0036 (4)
Br10.0521 (2)0.0697 (3)0.0701 (3)0.0172 (2)0.01277 (19)0.0041 (2)
C1—O11.472 (5)C8—H8A0.9700
C1—C21.487 (7)C8—H8B0.9700
C1—C81.544 (6)C9—C101.388 (6)
C1—H10.9800C9—C141.392 (6)
C2—C31.316 (7)C9—S11.757 (4)
C2—H20.9300C10—C111.380 (7)
C3—C41.498 (5)C10—H100.9300
C3—H30.9300C11—C121.390 (8)
C4—O11.446 (5)C11—H110.9300
C4—C51.487 (6)C12—C131.375 (7)
C4—C71.553 (5)C12—C151.502 (8)
C5—N11.467 (5)C13—C141.373 (7)
C5—H5A0.9700C13—H130.9300
C5—H5B0.9700C14—H140.9300
C6—N11.484 (5)C15—H15A0.9600
C6—C71.530 (5)C15—H15B0.9600
C6—H6A0.9700C15—H15C0.9600
C6—H6B0.9700N1—S11.616 (3)
C7—C81.535 (6)O2—S11.427 (3)
C7—Br11.971 (4)O3—S11.433 (3)
O1—C1—C2101.0 (4)C1—C8—H8A111.7
O1—C1—C899.5 (3)C7—C8—H8B111.7
C2—C1—C8109.5 (4)C1—C8—H8B111.7
O1—C1—H1115.0H8A—C8—H8B109.5
C2—C1—H1115.0C10—C9—C14119.7 (4)
C8—C1—H1115.0C10—C9—S1120.1 (3)
C3—C2—C1107.2 (4)C14—C9—S1120.1 (3)
C3—C2—H2126.4C11—C10—C9119.5 (4)
C1—C2—H2126.4C11—C10—H10120.3
C2—C3—C4105.3 (4)C9—C10—H10120.3
C2—C3—H3127.3C10—C11—C12121.4 (4)
C4—C3—H3127.3C10—C11—H11119.3
O1—C4—C5112.9 (3)C12—C11—H11119.3
O1—C4—C3101.9 (3)C13—C12—C11117.8 (5)
C5—C4—C3124.1 (4)C13—C12—C15121.5 (5)
O1—C4—C797.3 (3)C11—C12—C15120.7 (5)
C5—C4—C7106.9 (3)C14—C13—C12122.3 (5)
C3—C4—C7110.5 (3)C14—C13—H13118.8
N1—C5—C4103.8 (3)C12—C13—H13118.8
N1—C5—H5A111.0C13—C14—C9119.3 (4)
C4—C5—H5A111.0C13—C14—H14120.4
N1—C5—H5B111.0C9—C14—H14120.4
C4—C5—H5B111.0C12—C15—H15A109.5
H5A—C5—H5B109.0C12—C15—H15B109.5
N1—C6—C7104.1 (3)H15A—C15—H15B109.5
N1—C6—H6A110.9C12—C15—H15C109.5
C7—C6—H6A110.9H15A—C15—H15C109.5
N1—C6—H6B110.9H15B—C15—H15C109.5
C7—C6—H6B110.9C5—N1—C6112.2 (3)
H6A—C6—H6B108.9C5—N1—S1120.1 (3)
C6—C7—C8117.7 (3)C6—N1—S1121.8 (2)
C6—C7—C4101.7 (3)C4—O1—C195.1 (3)
C8—C7—C4102.9 (3)O2—S1—O3120.16 (19)
C6—C7—Br1109.5 (3)O2—S1—N1107.28 (19)
C8—C7—Br1113.4 (3)O3—S1—N1105.97 (18)
C4—C7—Br1110.7 (3)O2—S1—C9107.7 (2)
C7—C8—C1100.1 (3)O3—S1—C9107.9 (2)
C7—C8—H8A111.7N1—S1—C9107.18 (17)
O1—C1—C2—C331.5 (4)C10—C11—C12—C131.0 (7)
C8—C1—C2—C3−72.9 (5)C10—C11—C12—C15−180.0 (5)
C1—C2—C3—C40.8 (5)C11—C12—C13—C14−1.0 (7)
C2—C3—C4—O1−33.6 (4)C15—C12—C13—C14−180.0 (5)
C2—C3—C4—C5−162.1 (4)C12—C13—C14—C90.2 (7)
C2—C3—C4—C768.9 (4)C10—C9—C14—C130.6 (6)
O1—C4—C5—N180.2 (4)S1—C9—C14—C13−176.0 (3)
C3—C4—C5—N1−156.0 (4)C4—C5—N1—C67.1 (5)
C7—C4—C5—N1−25.6 (4)C4—C5—N1—S1160.4 (3)
N1—C6—C7—C8−139.8 (3)C7—C6—N1—C514.3 (5)
N1—C6—C7—C4−28.3 (4)C7—C6—N1—S1−138.6 (3)
N1—C6—C7—Br188.8 (3)C5—C4—O1—C1−174.3 (3)
O1—C4—C7—C6−82.6 (3)C3—C4—O1—C150.3 (3)
C5—C4—C7—C634.1 (4)C7—C4—O1—C1−62.5 (3)
C3—C4—C7—C6171.8 (3)C2—C1—O1—C4−49.4 (3)
O1—C4—C7—C839.7 (4)C8—C1—O1—C462.7 (3)
C5—C4—C7—C8156.4 (4)C5—N1—S1—O2160.6 (3)
C3—C4—C7—C8−65.9 (4)C6—N1—S1—O2−48.6 (4)
O1—C4—C7—Br1161.2 (2)C5—N1—S1—O331.1 (4)
C5—C4—C7—Br1−82.2 (4)C6—N1—S1—O3−178.1 (3)
C3—C4—C7—Br155.6 (4)C5—N1—S1—C9−83.9 (3)
C6—C7—C8—C1108.8 (4)C6—N1—S1—C966.9 (3)
C4—C7—C8—C1−2.0 (4)C10—C9—S1—O223.2 (4)
Br1—C7—C8—C1−121.5 (3)C14—C9—S1—O2−160.2 (3)
O1—C1—C8—C7−35.8 (4)C10—C9—S1—O3154.3 (3)
C2—C1—C8—C769.5 (4)C14—C9—S1—O3−29.1 (4)
C14—C9—C10—C11−0.6 (6)C10—C9—S1—N1−92.0 (3)
S1—C9—C10—C11176.1 (3)C14—C9—S1—N184.6 (3)
C9—C10—C11—C12−0.3 (7)
D—H···AD—HH···AD···AD—H···A
C6—H6A···O1i0.972.503.382 (6)151
C10—H10···O20.932.592.937 (6)103
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C6—H6A⋯O1i0.972.503.382 (6)151

Symmetry code: (i) .

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4.  (3aR,6S,7aR)-7a-Chloro-2-[(4-nitro-phen-yl)sulfon-yl]-1,2,3,6,7,7a-hexa-hydro-3a,6-ep-oxy-iso-indole.

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