| Literature DB >> 21754218 |
S Yousuf, S G Musharraf, I Khan, Hoong-Kun Fun.
Abstract
The title compound, C(10)H(14)O(2), was isolated from the chloro-form extract of Taxus wallichiana Zucc. In the crystal, mol-ecules are linked by inter-molecular O-H⋯O hydrogen bonds, forming sheets parallel to (100). There are weak inter-molecular C-H⋯π inter-actions between the sheets.Entities:
Year: 2011 PMID: 21754218 PMCID: PMC3099928 DOI: 10.1107/S1600536811010026
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C10H14O2 | |
| Monoclinic, | Cu |
| Hall symbol: P 2yb | Cell parameters from 3477 reflections |
| θ = 6.1–70.3° | |
| µ = 0.66 mm−1 | |
| β = 92.216 (2)° | Block, colorles |
| 0.39 × 0.12 × 0.05 mm | |
| Bruker SMART APEXII DUO CCD area-detector diffractometer | 1455 independent reflections |
| Radiation source: fine-focus sealed tube | 1446 reflections with |
| graphite | |
| φ and ω scans | θmax = 67.5°, θmin = 6.1° |
| Absorption correction: multi-scan ( | |
| 4954 measured reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H atoms treated by a mixture of independent and constrained refinement | |
| (Δ/σ)max = 0.001 | |
| 1455 reflections | Δρmax = 0.19 e Å−3 |
| 165 parameters | Δρmin = −0.23 e Å−3 |
| 1 restraint | Absolute structure: Flack (1983), 579 Friedel pairs |
| Primary atom site location: structure-invariant direct methods | Flack parameter: −0.03 (17) |
| Experimental. The crystal was placed in the cold stream of an Oxford Cryosystems Cobra
open-flow nitrogen cryostat (Cosier & Glazer, 1986) operating at 100.0 (1) K.
Cosier, J. & Glazer, A. M. (1986). |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| O1 | 0.33418 (12) | 0.03888 (15) | 0.11761 (9) | 0.0200 (2) | |
| O2 | 0.33463 (12) | 0.33901 (17) | 0.93717 (9) | 0.0214 (2) | |
| C1 | 0.22229 (17) | 0.3267 (2) | 0.42530 (13) | 0.0191 (3) | |
| C2 | 0.25737 (17) | 0.2886 (2) | 0.29010 (14) | 0.0184 (3) | |
| C3 | 0.29911 (15) | 0.08712 (19) | 0.24875 (13) | 0.0161 (3) | |
| C4 | 0.30875 (17) | −0.0757 (2) | 0.34234 (14) | 0.0191 (3) | |
| C5 | 0.27631 (16) | −0.0347 (2) | 0.47664 (13) | 0.0187 (3) | |
| C6 | 0.23165 (16) | 0.1659 (2) | 0.52052 (13) | 0.0173 (3) | |
| C7 | 0.19572 (19) | 0.2007 (2) | 0.66828 (14) | 0.0222 (3) | |
| C8 | 0.20129 (16) | 0.4288 (2) | 0.71453 (13) | 0.0179 (3) | |
| C9 | 0.18659 (17) | 0.4510 (2) | 0.86638 (13) | 0.0202 (3) | |
| C10 | 0.1875 (2) | 0.6786 (3) | 0.91038 (16) | 0.0286 (4) | |
| H1 | 0.192 (2) | 0.463 (3) | 0.4534 (16) | 0.019 (4)* | |
| H2 | 0.245 (2) | 0.401 (3) | 0.2254 (19) | 0.026 (4)* | |
| H4 | 0.339 (2) | −0.216 (3) | 0.3145 (17) | 0.024 (4)* | |
| H5 | 0.281 (2) | −0.143 (3) | 0.5411 (18) | 0.025 (4)* | |
| H7A | 0.076 (2) | 0.136 (3) | 0.6896 (18) | 0.027 (4)* | |
| H7B | 0.293 (3) | 0.123 (3) | 0.720 (2) | 0.032 (5)* | |
| H8A | 0.103 (3) | 0.501 (3) | 0.6728 (18) | 0.026 (4)* | |
| H8B | 0.322 (2) | 0.494 (3) | 0.6865 (15) | 0.013 (4)* | |
| H9 | 0.078 (2) | 0.383 (3) | 0.8913 (17) | 0.020 (4)* | |
| H10A | 0.075 (3) | 0.755 (4) | 0.873 (2) | 0.044 (6)* | |
| H10B | 0.304 (2) | 0.749 (3) | 0.8792 (17) | 0.021 (4)* | |
| H10C | 0.183 (3) | 0.691 (3) | 1.011 (2) | 0.040 (5)* | |
| H1O1 | 0.319 (3) | 0.151 (4) | 0.062 (2) | 0.043 (6)* | |
| H1O2 | 0.444 (3) | 0.400 (3) | 0.920 (2) | 0.036 (5)* |
| O1 | 0.0240 (4) | 0.0247 (5) | 0.0115 (5) | 0.0004 (4) | 0.0046 (3) | −0.0002 (4) |
| O2 | 0.0213 (5) | 0.0303 (5) | 0.0125 (5) | −0.0034 (4) | 0.0007 (3) | 0.0033 (4) |
| C1 | 0.0245 (6) | 0.0192 (7) | 0.0135 (6) | −0.0005 (5) | 0.0016 (5) | −0.0021 (5) |
| C2 | 0.0220 (6) | 0.0222 (8) | 0.0110 (6) | −0.0008 (5) | 0.0003 (5) | 0.0023 (5) |
| C3 | 0.0138 (6) | 0.0244 (7) | 0.0101 (6) | −0.0007 (5) | 0.0023 (4) | −0.0021 (5) |
| C4 | 0.0188 (6) | 0.0195 (7) | 0.0193 (7) | 0.0006 (5) | 0.0038 (4) | 0.0005 (5) |
| C5 | 0.0201 (6) | 0.0218 (7) | 0.0142 (7) | −0.0017 (5) | 0.0018 (4) | 0.0029 (5) |
| C6 | 0.0180 (6) | 0.0223 (7) | 0.0115 (7) | −0.0027 (5) | 0.0003 (5) | 0.0003 (5) |
| C7 | 0.0304 (7) | 0.0262 (8) | 0.0102 (7) | −0.0047 (6) | 0.0024 (5) | −0.0003 (5) |
| C8 | 0.0172 (6) | 0.0247 (7) | 0.0119 (6) | −0.0009 (5) | 0.0004 (4) | 0.0005 (5) |
| C9 | 0.0161 (6) | 0.0325 (8) | 0.0123 (7) | −0.0010 (5) | 0.0024 (4) | −0.0019 (6) |
| C10 | 0.0278 (7) | 0.0378 (9) | 0.0201 (8) | 0.0062 (7) | −0.0012 (5) | −0.0108 (6) |
| O1—C3 | 1.3728 (15) | C5—H5 | 0.94 (2) |
| O1—H1O1 | 0.91 (3) | C6—C7 | 1.5180 (17) |
| O2—C9 | 1.4473 (16) | C7—C8 | 1.5265 (19) |
| O2—H1O2 | 0.90 (2) | C7—H7A | 0.988 (19) |
| C1—C6 | 1.3959 (19) | C7—H7B | 0.99 (2) |
| C1—C2 | 1.3988 (18) | C8—C9 | 1.5241 (17) |
| C1—H1 | 0.943 (19) | C8—H8A | 0.93 (2) |
| C2—C3 | 1.3865 (18) | C8—H8B | 1.018 (15) |
| C2—H2 | 0.96 (2) | C9—C10 | 1.517 (2) |
| C3—C4 | 1.3948 (18) | C9—H9 | 0.938 (17) |
| C4—C5 | 1.390 (2) | C10—H10A | 1.01 (2) |
| C4—H4 | 0.97 (2) | C10—H10B | 1.013 (18) |
| C5—C6 | 1.3942 (19) | C10—H10C | 1.01 (2) |
| C3—O1—H1O1 | 112.1 (15) | C8—C7—H7A | 110.2 (11) |
| C9—O2—H1O2 | 109.6 (13) | C6—C7—H7B | 106.5 (12) |
| C6—C1—C2 | 121.21 (12) | C8—C7—H7B | 108.1 (12) |
| C6—C1—H1 | 118.9 (10) | H7A—C7—H7B | 107.0 (15) |
| C2—C1—H1 | 119.9 (10) | C9—C8—C7 | 112.65 (11) |
| C3—C2—C1 | 119.72 (12) | C9—C8—H8A | 108.3 (11) |
| C3—C2—H2 | 120.5 (11) | C7—C8—H8A | 109.0 (12) |
| C1—C2—H2 | 119.7 (11) | C9—C8—H8B | 109.0 (9) |
| O1—C3—C2 | 122.67 (11) | C7—C8—H8B | 108.8 (9) |
| O1—C3—C4 | 117.40 (11) | H8A—C8—H8B | 109.0 (14) |
| C2—C3—C4 | 119.93 (11) | O2—C9—C10 | 109.73 (11) |
| C5—C4—C3 | 119.64 (12) | O2—C9—C8 | 110.92 (10) |
| C5—C4—H4 | 119.9 (11) | C10—C9—C8 | 112.02 (12) |
| C3—C4—H4 | 120.4 (11) | O2—C9—H9 | 104.8 (11) |
| C4—C5—C6 | 121.57 (12) | C10—C9—H9 | 111.0 (11) |
| C4—C5—H5 | 120.8 (12) | C8—C9—H9 | 108.0 (10) |
| C6—C5—H5 | 117.6 (12) | C9—C10—H10A | 111.3 (13) |
| C5—C6—C1 | 117.92 (12) | C9—C10—H10B | 109.5 (11) |
| C5—C6—C7 | 119.18 (11) | H10A—C10—H10B | 109.7 (16) |
| C1—C6—C7 | 122.90 (12) | C9—C10—H10C | 111.3 (13) |
| C6—C7—C8 | 115.31 (11) | H10A—C10—H10C | 105.7 (17) |
| C6—C7—H7A | 109.3 (11) | H10B—C10—H10C | 109.3 (15) |
| C6—C1—C2—C3 | 1.14 (18) | C2—C1—C6—C5 | −0.29 (18) |
| C1—C2—C3—O1 | 179.72 (10) | C2—C1—C6—C7 | 179.64 (11) |
| C1—C2—C3—C4 | −0.99 (17) | C5—C6—C7—C8 | 163.67 (11) |
| O1—C3—C4—C5 | 179.33 (10) | C1—C6—C7—C8 | −16.26 (18) |
| C2—C3—C4—C5 | 0.01 (17) | C6—C7—C8—C9 | −173.32 (10) |
| C3—C4—C5—C6 | 0.86 (17) | C7—C8—C9—O2 | 58.43 (14) |
| C4—C5—C6—C1 | −0.71 (17) | C7—C8—C9—C10 | −178.58 (11) |
| C4—C5—C6—C7 | 179.36 (11) |
| Cg1 is the centroid of the C1–C6 ring |
| H··· | ||||
| O1—H1O1···O2i | 0.92 (2) | 1.72 (2) | 2.6247 (13) | 166 (2) |
| O2—H1O2···O1ii | 0.91 (2) | 1.88 (2) | 2.7869 (13) | 177.8 (19) |
| C8—H8A···Cg1iii | 0.93 (2) | 2.822 (15) | 3.7033 (13) | 158.1 (14) |
Hydrogen-bond geometry (Å, °)
Cg1 is the centroid of the C1–C6 ring
| H⋯ | ||||
|---|---|---|---|---|
| O1—H1 | 0.92 (2) | 1.72 (2) | 2.6247 (13) | 166 (2) |
| O2—H1 | 0.91 (2) | 1.88 (2) | 2.7869 (13) | 177.8 (19) |
| C8—H8 | 0.93 (2) | 2.822 (15) | 3.7033 (13) | 158.1 (14) |
Symmetry codes: (i) ; (ii) ; (iii) .