| Literature DB >> 21754162 |
Muneeb Hayat Khan, Islam Ullah Khan, Muhammad Nadeem Arshad, Shumaila Younas Mughal, Mehmet Akkurt.
Abstract
In the title mol-ecule, C(13)H(19)NO(3)S, the S atom has a distorted tetra-hedral geometry with an O-S-O bond angle of 120.39 (18)°. The cyclo-hexane ring has a chair conformation. In the crystal, mol-ecules are connected by inter-molecular N-H⋯O hydrogen bonds, forming zigzag hydrogen-bonded chains directed along the c axis.Entities:
Year: 2011 PMID: 21754162 PMCID: PMC3099924 DOI: 10.1107/S1600536811009172
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C13H19NO3S | |
| Orthorhombic, | Mo |
| Hall symbol: A 2 -2ac | Cell parameters from 3418 reflections |
| θ = 2.3–24.7° | |
| µ = 0.23 mm−1 | |
| Prism, light brown | |
| 0.29 × 0.12 × 0.09 mm |
| Bruker APEXII CCD diffractometer | 1945 reflections with |
| Radiation source: sealed tube | |
| graphite | θmax = 28.3°, θmin = 3.0° |
| φ and ω scans | |
| 10601 measured reflections | |
| 2704 independent reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H atoms treated by a mixture of independent and constrained refinement | |
| (Δ/σ)max < 0.001 | |
| 2704 reflections | Δρmax = 0.17 e Å−3 |
| 167 parameters | Δρmin = −0.27 e Å−3 |
| 2 restraints | Absolute structure: Flack (1983), 829 Freidel pairs |
| Primary atom site location: structure-invariant direct methods | Flack parameter: −0.05 (12) |
| Geometry. Bond distances, angles |
| Refinement. Refinement on |
| S1 | 0.16185 (4) | 0.09694 (5) | 0.20157 (12) | 0.0614 (3) | |
| O1 | 0.09659 (16) | 0.11080 (14) | 0.3056 (4) | 0.0832 (11) | |
| O2 | 0.23822 (17) | 0.11611 (14) | 0.2537 (4) | 0.0901 (11) | |
| O3 | 0.16806 (14) | −0.18793 (14) | 0.1087 (4) | 0.0822 (11) | |
| N1 | 0.14869 (13) | 0.13120 (14) | 0.0241 (4) | 0.0556 (10) | |
| C1 | 0.0682 (2) | 0.20104 (16) | −0.1482 (5) | 0.0697 (15) | |
| C2 | −0.0103 (3) | 0.21102 (18) | −0.2295 (6) | 0.0850 (16) | |
| C3 | −0.0294 (2) | 0.15634 (19) | −0.3505 (5) | 0.0710 (16) | |
| C4 | −0.0226 (2) | 0.09157 (18) | −0.2642 (6) | 0.0783 (16) | |
| C5 | 0.0557 (2) | 0.08162 (16) | −0.1777 (6) | 0.0724 (13) | |
| C6 | 0.07253 (15) | 0.13658 (15) | −0.0581 (4) | 0.0501 (10) | |
| C7 | 0.16495 (15) | 0.01229 (17) | 0.1741 (4) | 0.0515 (10) | |
| C8 | 0.10900 (15) | −0.0285 (2) | 0.2421 (4) | 0.0613 (13) | |
| C9 | 0.11159 (16) | −0.09474 (19) | 0.2187 (5) | 0.0621 (11) | |
| C10 | 0.17072 (17) | −0.12166 (19) | 0.1247 (5) | 0.0576 (11) | |
| C11 | 0.22723 (18) | −0.08270 (18) | 0.0575 (6) | 0.0693 (16) | |
| C12 | 0.22479 (17) | −0.01640 (19) | 0.0830 (5) | 0.0694 (15) | |
| C13 | 0.2233 (3) | −0.2198 (2) | 0.0041 (8) | 0.111 (2) | |
| HN1 | 0.1894 (15) | 0.1299 (18) | −0.037 (4) | 0.0740* | |
| H1A | 0.10810 | 0.20280 | −0.23440 | 0.0840* | |
| H1B | 0.07780 | 0.23610 | −0.06840 | 0.0840* | |
| H2A | −0.04970 | 0.21310 | −0.14230 | 0.1020* | |
| H2B | −0.01050 | 0.25220 | −0.29000 | 0.1020* | |
| H3A | −0.08170 | 0.16190 | −0.39270 | 0.0860* | |
| H3B | 0.00570 | 0.15780 | −0.44610 | 0.0860* | |
| H4A | −0.03020 | 0.05720 | −0.34680 | 0.0940* | |
| H4B | −0.06340 | 0.08780 | −0.18040 | 0.0940* | |
| H5A | 0.05530 | 0.04060 | −0.11610 | 0.0870* | |
| H5B | 0.09620 | 0.07930 | −0.26240 | 0.0870* | |
| H6 | 0.03280 | 0.13630 | 0.03040 | 0.0600* | |
| H8 | 0.06880 | −0.01050 | 0.30500 | 0.0740* | |
| H9 | 0.07370 | −0.12140 | 0.26590 | 0.0750* | |
| H11 | 0.26720 | −0.10110 | −0.00540 | 0.0830* | |
| H12 | 0.26380 | 0.00980 | 0.03860 | 0.0830* | |
| H13A | 0.22010 | −0.20250 | −0.10840 | 0.1670* | |
| H13B | 0.21260 | −0.26580 | 0.00190 | 0.1670* | |
| H13C | 0.27430 | −0.21260 | 0.04830 | 0.1670* |
| S1 | 0.0628 (4) | 0.0785 (6) | 0.0429 (4) | 0.0052 (4) | −0.0071 (4) | −0.0091 (5) |
| O1 | 0.0961 (19) | 0.106 (2) | 0.0476 (16) | 0.0250 (15) | 0.0154 (14) | −0.0076 (15) |
| O2 | 0.0793 (17) | 0.107 (2) | 0.084 (2) | −0.0051 (15) | −0.0333 (15) | −0.0189 (17) |
| O3 | 0.0877 (18) | 0.0690 (18) | 0.090 (2) | −0.0011 (13) | 0.0110 (15) | 0.0140 (15) |
| N1 | 0.0457 (13) | 0.0707 (19) | 0.0503 (17) | −0.0032 (12) | 0.0027 (11) | −0.0033 (14) |
| C1 | 0.096 (3) | 0.0442 (18) | 0.069 (3) | −0.0004 (17) | −0.0043 (19) | −0.0053 (19) |
| C2 | 0.110 (3) | 0.066 (2) | 0.079 (3) | 0.024 (2) | −0.020 (2) | 0.002 (2) |
| C3 | 0.082 (2) | 0.074 (3) | 0.057 (3) | 0.0093 (19) | −0.0133 (18) | 0.0056 (19) |
| C4 | 0.082 (2) | 0.064 (2) | 0.089 (4) | −0.0068 (18) | −0.033 (2) | 0.000 (2) |
| C5 | 0.086 (2) | 0.0413 (18) | 0.090 (3) | 0.0029 (17) | −0.028 (2) | −0.0018 (19) |
| C6 | 0.0466 (14) | 0.057 (2) | 0.0467 (18) | 0.0002 (12) | 0.0011 (13) | 0.0052 (14) |
| C7 | 0.0403 (13) | 0.075 (2) | 0.0391 (19) | 0.0071 (13) | −0.0031 (12) | 0.0041 (15) |
| C8 | 0.0380 (14) | 0.098 (3) | 0.048 (2) | 0.0078 (15) | 0.0035 (13) | 0.0058 (18) |
| C9 | 0.0442 (14) | 0.084 (2) | 0.058 (2) | −0.0074 (15) | 0.0043 (16) | 0.016 (2) |
| C10 | 0.0542 (18) | 0.070 (2) | 0.0487 (19) | 0.0028 (16) | −0.0023 (15) | 0.0097 (17) |
| C11 | 0.064 (2) | 0.074 (3) | 0.070 (3) | 0.0076 (17) | 0.0265 (19) | 0.007 (2) |
| C12 | 0.0581 (19) | 0.082 (3) | 0.068 (3) | −0.0029 (16) | 0.0222 (17) | 0.009 (2) |
| C13 | 0.122 (4) | 0.091 (3) | 0.121 (5) | 0.019 (3) | 0.035 (3) | −0.009 (3) |
| S1—O1 | 1.424 (3) | C11—C12 | 1.373 (5) |
| S1—O2 | 1.436 (3) | C1—H1A | 0.9700 |
| S1—N1 | 1.586 (3) | C1—H1B | 0.9700 |
| S1—C7 | 1.747 (4) | C2—H2A | 0.9700 |
| O3—C10 | 1.363 (5) | C2—H2B | 0.9700 |
| O3—C13 | 1.421 (6) | C3—H3A | 0.9700 |
| N1—C6 | 1.471 (4) | C3—H3B | 0.9700 |
| N1—HN1 | 0.85 (3) | C4—H4A | 0.9700 |
| C1—C2 | 1.514 (6) | C4—H4B | 0.9700 |
| C1—C6 | 1.502 (5) | C5—H5A | 0.9700 |
| C2—C3 | 1.510 (6) | C5—H5B | 0.9700 |
| C3—C4 | 1.496 (6) | C6—H6 | 0.9800 |
| C4—C5 | 1.529 (5) | C8—H8 | 0.9300 |
| C5—C6 | 1.499 (5) | C9—H9 | 0.9300 |
| C7—C12 | 1.390 (4) | C11—H11 | 0.9300 |
| C7—C8 | 1.386 (4) | C12—H12 | 0.9300 |
| C8—C9 | 1.369 (6) | C13—H13A | 0.9600 |
| C9—C10 | 1.378 (5) | C13—H13B | 0.9600 |
| C10—C11 | 1.368 (5) | C13—H13C | 0.9600 |
| O1—S1—O2 | 120.39 (18) | C3—C2—H2A | 109.00 |
| O1—S1—N1 | 108.09 (16) | C3—C2—H2B | 109.00 |
| O1—S1—C7 | 107.08 (16) | H2A—C2—H2B | 108.00 |
| O2—S1—N1 | 105.37 (16) | C2—C3—H3A | 110.00 |
| O2—S1—C7 | 106.18 (15) | C2—C3—H3B | 110.00 |
| N1—S1—C7 | 109.43 (16) | C4—C3—H3A | 110.00 |
| C10—O3—C13 | 119.2 (3) | C4—C3—H3B | 110.00 |
| S1—N1—C6 | 123.6 (2) | H3A—C3—H3B | 108.00 |
| S1—N1—HN1 | 112 (2) | C3—C4—H4A | 109.00 |
| C6—N1—HN1 | 119 (2) | C3—C4—H4B | 109.00 |
| C2—C1—C6 | 111.4 (3) | C5—C4—H4A | 109.00 |
| C1—C2—C3 | 111.4 (3) | C5—C4—H4B | 109.00 |
| C2—C3—C4 | 110.5 (3) | H4A—C4—H4B | 108.00 |
| C3—C4—C5 | 113.1 (3) | C4—C5—H5A | 109.00 |
| C4—C5—C6 | 110.7 (3) | C4—C5—H5B | 110.00 |
| N1—C6—C5 | 113.4 (3) | C6—C5—H5A | 109.00 |
| C1—C6—C5 | 110.5 (3) | C6—C5—H5B | 109.00 |
| N1—C6—C1 | 108.7 (2) | H5A—C5—H5B | 108.00 |
| C8—C7—C12 | 117.7 (3) | N1—C6—H6 | 108.00 |
| S1—C7—C8 | 121.9 (2) | C1—C6—H6 | 108.00 |
| S1—C7—C12 | 120.4 (3) | C5—C6—H6 | 108.00 |
| C7—C8—C9 | 121.4 (3) | C7—C8—H8 | 119.00 |
| C8—C9—C10 | 119.6 (3) | C9—C8—H8 | 119.00 |
| O3—C10—C11 | 124.6 (3) | C8—C9—H9 | 120.00 |
| O3—C10—C9 | 115.0 (3) | C10—C9—H9 | 120.00 |
| C9—C10—C11 | 120.3 (4) | C10—C11—H11 | 120.00 |
| C10—C11—C12 | 119.8 (3) | C12—C11—H11 | 120.00 |
| C7—C12—C11 | 121.1 (3) | C7—C12—H12 | 119.00 |
| C2—C1—H1A | 109.00 | C11—C12—H12 | 120.00 |
| C2—C1—H1B | 109.00 | O3—C13—H13A | 109.00 |
| C6—C1—H1A | 109.00 | O3—C13—H13B | 109.00 |
| C6—C1—H1B | 109.00 | O3—C13—H13C | 109.00 |
| H1A—C1—H1B | 108.00 | H13A—C13—H13B | 110.00 |
| C1—C2—H2A | 109.00 | H13A—C13—H13C | 110.00 |
| C1—C2—H2B | 109.00 | H13B—C13—H13C | 110.00 |
| O1—S1—N1—C6 | −36.4 (3) | C1—C2—C3—C4 | 54.1 (4) |
| O2—S1—N1—C6 | −166.3 (3) | C2—C3—C4—C5 | −53.2 (5) |
| C7—S1—N1—C6 | 79.9 (3) | C3—C4—C5—C6 | 54.4 (5) |
| N1—S1—C7—C12 | 65.7 (3) | C4—C5—C6—N1 | −177.6 (3) |
| O2—S1—C7—C8 | 132.0 (3) | C4—C5—C6—C1 | −55.4 (4) |
| N1—S1—C7—C8 | −114.7 (3) | S1—C7—C12—C11 | −178.7 (3) |
| O1—S1—C7—C8 | 2.2 (3) | C8—C7—C12—C11 | 1.7 (5) |
| O2—S1—C7—C12 | −47.6 (3) | S1—C7—C8—C9 | 179.5 (3) |
| O1—S1—C7—C12 | −177.4 (3) | C12—C7—C8—C9 | −1.0 (5) |
| C13—O3—C10—C11 | −5.6 (6) | C7—C8—C9—C10 | −0.4 (5) |
| C13—O3—C10—C9 | 175.5 (4) | C8—C9—C10—C11 | 1.1 (6) |
| S1—N1—C6—C1 | 144.0 (3) | C8—C9—C10—O3 | −179.9 (3) |
| S1—N1—C6—C5 | −92.7 (3) | O3—C10—C11—C12 | −179.2 (4) |
| C2—C1—C6—N1 | −177.5 (3) | C9—C10—C11—C12 | −0.4 (6) |
| C6—C1—C2—C3 | −57.0 (4) | C10—C11—C12—C7 | −1.1 (6) |
| C2—C1—C6—C5 | 57.5 (4) |
| H··· | ||||
| N1—HN1···O2i | 0.85 (3) | 2.09 (3) | 2.913 (4) | 161 (3) |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N1—H | 0.85 (3) | 2.09 (3) | 2.913 (4) | 161 (3) |
Symmetry code: (i) .