| Literature DB >> 21754012 |
Abstract
The complete mol-ecule of the title compound, [Cd(C(10)H(9)N(4)O(2)S)(2)(C(2)H(6)OS)(2)], is completed by the application of a twofold rotation axis. The Cd(II) atom is six coordinated by two bidentate sulfadiazinate anions and two dimethyl-sulfoxide mol-ecules. The resulting N(4)O(2) donor set displays a distorted trigonal-prismatic coordination geometry. The S atom and methyl groups of dimethyl-sulfoxide are disordered over two sets of sites, with site occupancies of 0.715 (4) and 0.285 (4). The crystal structure features inter-molecular N-H⋯N and N-H⋯O hydrogen bonds that lead to the formation of layers in the ab plane.Entities:
Year: 2011 PMID: 21754012 PMCID: PMC3099781 DOI: 10.1107/S1600536811010816
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| [Cd(C10H9N4O2S)2(C2H6OS)2] | |
| Orthorhombic, | Mo |
| Hall symbol: -P 2n 2ab | Cell parameters from 3503 reflections |
| θ = 2.9–27.5° | |
| µ = 1.04 mm−1 | |
| Block, white | |
| 0.22 × 0.20 × 0.18 mm |
| Nonius KappaCCD diffractometer | 3503 independent reflections |
| Radiation source: fine-focus sealed tube | 2545 reflections with |
| graphite | |
| ω scans | θmax = 27.5°, θmin = 3.2° |
| Absorption correction: multi-scan (Blessing, 1995) | |
| 21431 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 3503 reflections | (Δ/σ)max = 0.001 |
| 235 parameters | Δρmax = 0.74 e Å−3 |
| 30 restraints | Δρmin = −0.78 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Occ. (<1) | |||||
| Cd1 | 0.0000 | 0.12725 (2) | 0.2500 | 0.02037 (13) | |
| S11 | −0.15957 (6) | 0.26178 (6) | 0.36236 (8) | 0.0199 (2) | |
| O11 | −0.20168 (16) | 0.21509 (17) | 0.2743 (2) | 0.0270 (7) | |
| O12 | −0.19685 (16) | 0.26244 (17) | 0.4719 (2) | 0.0257 (6) | |
| N11 | −0.07346 (19) | 0.21814 (19) | 0.3648 (3) | 0.0198 (7) | |
| N12 | 0.05166 (19) | 0.1969 (2) | 0.4215 (3) | 0.0199 (7) | |
| N13 | −0.0247 (2) | 0.3085 (2) | 0.5150 (3) | 0.0249 (8) | |
| N14 | −0.1601 (2) | 0.6222 (2) | 0.1768 (3) | 0.0303 (8) | |
| H14A | −0.129 (2) | 0.630 (3) | 0.111 (3) | 0.049 (15)* | |
| H14B | −0.204 (2) | 0.655 (3) | 0.204 (4) | 0.050 (15)* | |
| C11 | −0.0156 (2) | 0.2441 (2) | 0.4378 (3) | 0.0192 (8) | |
| C12 | 0.1152 (2) | 0.2199 (3) | 0.4811 (3) | 0.0262 (9) | |
| H12 | 0.1637 | 0.1901 | 0.4685 | 0.031* | |
| C13 | 0.1122 (3) | 0.2854 (3) | 0.5601 (4) | 0.0328 (11) | |
| H13 | 0.1575 | 0.3016 | 0.6026 | 0.039* | |
| C14 | 0.0402 (3) | 0.3271 (3) | 0.5751 (4) | 0.0329 (11) | |
| H14 | 0.0367 | 0.3714 | 0.6313 | 0.039* | |
| C15 | −0.1503 (2) | 0.3716 (2) | 0.3178 (3) | 0.0206 (8) | |
| C16 | −0.1968 (3) | 0.4361 (3) | 0.3654 (3) | 0.0280 (10) | |
| H16 | −0.2269 | 0.4232 | 0.4312 | 0.034* | |
| C17 | −0.2005 (3) | 0.5188 (3) | 0.3195 (4) | 0.0288 (10) | |
| H17 | −0.2336 | 0.5619 | 0.3530 | 0.035* | |
| C18 | −0.1556 (2) | 0.5402 (2) | 0.2229 (3) | 0.0231 (9) | |
| C19 | −0.1065 (3) | 0.4757 (3) | 0.1783 (4) | 0.0312 (10) | |
| H19 | −0.0739 | 0.4889 | 0.1152 | 0.037* | |
| C20 | −0.1045 (3) | 0.3927 (3) | 0.2248 (4) | 0.0332 (11) | |
| H20 | −0.0711 | 0.3493 | 0.1924 | 0.040* | |
| O1 | −0.08770 (19) | 0.01537 (18) | 0.2349 (2) | 0.0364 (8) | |
| S1 | −0.08063 (10) | −0.05478 (10) | 0.14466 (12) | 0.0277 (5) | 0.715 (4) |
| S1' | −0.1400 (3) | −0.0149 (3) | 0.1457 (3) | 0.0378 (15) | 0.285 (4) |
| C1 | −0.1509 (6) | −0.0296 (6) | 0.0397 (7) | 0.068 (2) | 0.715 (4) |
| H1A | −0.2036 | −0.0265 | 0.0739 | 0.101* | 0.715 (4) |
| H1B | −0.1504 | −0.0753 | −0.0185 | 0.101* | 0.715 (4) |
| H1C | −0.1379 | 0.0271 | 0.0053 | 0.101* | 0.715 (4) |
| C2 | −0.1237 (6) | −0.1479 (5) | 0.2028 (7) | 0.051 (2) | 0.715 (4) |
| H2A | −0.0896 | −0.1710 | 0.2628 | 0.076* | 0.715 (4) |
| H2B | −0.1304 | −0.1925 | 0.1440 | 0.076* | 0.715 (4) |
| H2C | −0.1754 | −0.1327 | 0.2346 | 0.076* | 0.715 (4) |
| C1' | −0.0900 (11) | −0.0263 (12) | 0.0231 (14) | 0.042 (4) | 0.285 (4) |
| H1'1 | −0.0843 | 0.0311 | −0.0132 | 0.064* | 0.285 (4) |
| H1'2 | −0.1192 | −0.0659 | −0.0271 | 0.064* | 0.285 (4) |
| H1'3 | −0.0375 | −0.0508 | 0.0384 | 0.064* | 0.285 (4) |
| C2' | −0.1696 (10) | −0.1245 (11) | 0.1724 (15) | 0.040 (4) | 0.285 (4) |
| H2'1 | −0.1269 | −0.1646 | 0.1512 | 0.060* | 0.285 (4) |
| H2'2 | −0.2169 | −0.1380 | 0.1278 | 0.060* | 0.285 (4) |
| H2'3 | −0.1816 | −0.1315 | 0.2529 | 0.060* | 0.285 (4) |
| Cd1 | 0.0263 (2) | 0.0129 (2) | 0.0219 (2) | 0.000 | −0.00159 (18) | 0.000 |
| S11 | 0.0156 (5) | 0.0151 (5) | 0.0291 (5) | −0.0010 (4) | −0.0004 (4) | 0.0004 (4) |
| O11 | 0.0217 (15) | 0.0207 (15) | 0.0386 (17) | −0.0055 (12) | −0.0096 (13) | −0.0029 (12) |
| O12 | 0.0208 (15) | 0.0236 (15) | 0.0328 (15) | 0.0002 (12) | 0.0050 (12) | 0.0048 (12) |
| N11 | 0.0178 (17) | 0.0148 (16) | 0.0269 (17) | 0.0027 (13) | −0.0023 (15) | −0.0019 (13) |
| N12 | 0.0162 (17) | 0.0201 (17) | 0.0234 (16) | 0.0028 (14) | 0.0008 (14) | 0.0010 (13) |
| N13 | 0.0215 (19) | 0.0261 (18) | 0.0270 (18) | −0.0002 (15) | 0.0013 (15) | −0.0092 (14) |
| N14 | 0.039 (2) | 0.0210 (18) | 0.0309 (19) | 0.0042 (18) | 0.0156 (18) | 0.0058 (15) |
| C11 | 0.017 (2) | 0.0179 (19) | 0.0223 (19) | −0.0025 (16) | 0.0031 (16) | 0.0003 (15) |
| C12 | 0.018 (2) | 0.033 (2) | 0.028 (2) | 0.0020 (18) | −0.0021 (18) | 0.0006 (18) |
| C13 | 0.023 (2) | 0.042 (3) | 0.033 (2) | −0.004 (2) | −0.0073 (19) | −0.010 (2) |
| C14 | 0.028 (3) | 0.038 (3) | 0.033 (2) | −0.002 (2) | −0.005 (2) | −0.017 (2) |
| C15 | 0.018 (2) | 0.0148 (19) | 0.029 (2) | 0.0010 (17) | −0.0021 (17) | 0.0018 (15) |
| C16 | 0.032 (3) | 0.022 (2) | 0.030 (2) | 0.0020 (19) | 0.0095 (19) | 0.0010 (17) |
| C17 | 0.030 (2) | 0.019 (2) | 0.038 (2) | 0.0068 (19) | 0.012 (2) | −0.0014 (17) |
| C18 | 0.024 (2) | 0.0173 (19) | 0.028 (2) | −0.0019 (17) | −0.0015 (18) | −0.0007 (15) |
| C19 | 0.036 (3) | 0.020 (2) | 0.038 (2) | −0.0013 (19) | 0.020 (2) | 0.0011 (18) |
| C20 | 0.037 (3) | 0.016 (2) | 0.047 (3) | 0.0023 (19) | 0.019 (2) | −0.0017 (18) |
| O1 | 0.048 (2) | 0.0229 (15) | 0.0381 (17) | −0.0132 (15) | −0.0010 (15) | −0.0059 (13) |
| S1 | 0.0303 (11) | 0.0219 (8) | 0.0310 (8) | −0.0015 (7) | −0.0025 (7) | −0.0043 (6) |
| S1' | 0.040 (3) | 0.038 (3) | 0.036 (2) | −0.001 (2) | 0.0012 (19) | −0.0055 (18) |
| C1 | 0.074 (4) | 0.066 (4) | 0.063 (4) | 0.014 (4) | −0.024 (4) | −0.011 (3) |
| C2 | 0.071 (4) | 0.031 (3) | 0.050 (4) | −0.012 (3) | 0.008 (3) | −0.003 (3) |
| C1' | 0.051 (6) | 0.039 (6) | 0.037 (6) | −0.004 (5) | 0.005 (5) | −0.002 (4) |
| C2' | 0.041 (6) | 0.036 (6) | 0.043 (6) | −0.008 (5) | 0.005 (5) | −0.006 (4) |
| Cd1—O1 | 2.268 (3) | C16—H16 | 0.9500 |
| Cd1—O1i | 2.268 (3) | C17—C18 | 1.412 (6) |
| Cd1—N11i | 2.305 (3) | C17—H17 | 0.9500 |
| Cd1—N11 | 2.305 (3) | C18—C19 | 1.391 (6) |
| Cd1—N12 | 2.452 (3) | C19—C20 | 1.380 (6) |
| Cd1—N12i | 2.452 (3) | C19—H19 | 0.9500 |
| S11—O12 | 1.442 (3) | C20—H20 | 0.9500 |
| S11—O11 | 1.449 (3) | O1—S1' | 1.452 (5) |
| S11—N11 | 1.602 (3) | O1—S1 | 1.516 (3) |
| S11—C15 | 1.762 (4) | S1—C2 | 1.738 (7) |
| N11—C11 | 1.364 (5) | S1—C1 | 1.763 (8) |
| N12—C12 | 1.333 (5) | S1'—C1' | 1.689 (16) |
| N12—C11 | 1.361 (5) | S1'—C2' | 1.774 (18) |
| N13—C14 | 1.339 (5) | C1—H1A | 0.9800 |
| N13—C11 | 1.351 (5) | C1—H1B | 0.9800 |
| N14—C18 | 1.366 (5) | C1—H1C | 0.9800 |
| N14—H14A | 0.94 (3) | C2—H2A | 0.9800 |
| N14—H14B | 0.95 (3) | C2—H2B | 0.9800 |
| C12—C13 | 1.369 (6) | C2—H2C | 0.9800 |
| C12—H12 | 0.9500 | C1'—H1'1 | 0.9800 |
| C13—C14 | 1.385 (6) | C1'—H1'2 | 0.9800 |
| C13—H13 | 0.9500 | C1'—H1'3 | 0.9800 |
| C14—H14 | 0.9500 | C2'—H2'1 | 0.9800 |
| C15—C16 | 1.381 (5) | C2'—H2'2 | 0.9800 |
| C15—C20 | 1.385 (6) | C2'—H2'3 | 0.9800 |
| C16—C17 | 1.373 (6) | ||
| O1—Cd1—O1i | 82.45 (16) | N13—C14—H14 | 118.1 |
| O1—Cd1—N11i | 139.32 (10) | C13—C14—H14 | 118.1 |
| O1i—Cd1—N11i | 98.40 (11) | C16—C15—C20 | 118.6 (4) |
| O1—Cd1—N11 | 98.40 (11) | C16—C15—S11 | 120.3 (3) |
| O1i—Cd1—N11 | 139.32 (10) | C20—C15—S11 | 120.6 (3) |
| N11i—Cd1—N11 | 106.09 (15) | C17—C16—C15 | 121.2 (4) |
| O1—Cd1—N12 | 128.62 (10) | C17—C16—H16 | 119.4 |
| O1i—Cd1—N12 | 91.54 (11) | C15—C16—H16 | 119.4 |
| N11i—Cd1—N12 | 92.06 (11) | C16—C17—C18 | 120.5 (4) |
| N11—Cd1—N12 | 56.20 (11) | C16—C17—H17 | 119.7 |
| O1—Cd1—N12i | 91.54 (11) | C18—C17—H17 | 119.7 |
| O1i—Cd1—N12i | 128.62 (10) | N14—C18—C19 | 121.9 (4) |
| N11i—Cd1—N12i | 56.20 (11) | N14—C18—C17 | 120.3 (4) |
| N11—Cd1—N12i | 92.06 (11) | C19—C18—C17 | 117.8 (4) |
| N12—Cd1—N12i | 128.72 (14) | C20—C19—C18 | 120.7 (4) |
| O12—S11—O11 | 115.81 (17) | C20—C19—H19 | 119.6 |
| O12—S11—N11 | 112.60 (17) | C18—C19—H19 | 119.6 |
| O11—S11—N11 | 104.83 (17) | C19—C20—C15 | 121.1 (4) |
| O12—S11—C15 | 107.54 (17) | C19—C20—H20 | 119.4 |
| O11—S11—C15 | 107.16 (17) | C15—C20—H20 | 119.4 |
| N11—S11—C15 | 108.61 (17) | S1'—O1—S1 | 46.5 (2) |
| C11—N11—S11 | 122.9 (3) | S1'—O1—Cd1 | 134.0 (2) |
| C11—N11—Cd1 | 99.3 (2) | S1—O1—Cd1 | 122.32 (18) |
| S11—N11—Cd1 | 136.84 (18) | O1—S1—C2 | 105.3 (3) |
| C12—N12—C11 | 117.4 (3) | O1—S1—C1 | 106.8 (3) |
| C12—N12—Cd1 | 147.1 (3) | C2—S1—C1 | 100.1 (5) |
| C11—N12—Cd1 | 92.8 (2) | O1—S1'—C1' | 110.7 (7) |
| C14—N13—C11 | 114.8 (3) | O1—S1'—C2' | 110.0 (6) |
| C18—N14—H14A | 114 (3) | C1'—S1'—C2' | 101.4 (9) |
| C18—N14—H14B | 114 (3) | S1'—C1'—H1'1 | 109.5 |
| H14A—N14—H14B | 130 (4) | S1'—C1'—H1'2 | 109.5 |
| N13—C11—N12 | 125.1 (3) | H1'1—C1'—H1'2 | 109.5 |
| N13—C11—N11 | 123.9 (3) | S1'—C1'—H1'3 | 109.5 |
| N12—C11—N11 | 110.9 (3) | H1'1—C1'—H1'3 | 109.5 |
| N12—C12—C13 | 121.6 (4) | H1'2—C1'—H1'3 | 109.5 |
| N12—C12—H12 | 119.2 | S1'—C2'—H2'1 | 109.5 |
| C13—C12—H12 | 119.2 | S1'—C2'—H2'2 | 109.5 |
| C12—C13—C14 | 117.1 (4) | H2'1—C2'—H2'2 | 109.5 |
| C12—C13—H13 | 121.5 | S1'—C2'—H2'3 | 109.5 |
| C14—C13—H13 | 121.5 | H2'1—C2'—H2'3 | 109.5 |
| N13—C14—C13 | 123.8 (4) | H2'2—C2'—H2'3 | 109.5 |
| O12—S11—N11—C11 | −52.9 (3) | N12—C12—C13—C14 | −0.2 (7) |
| O11—S11—N11—C11 | −179.7 (3) | C11—N13—C14—C13 | 0.9 (6) |
| C15—S11—N11—C11 | 66.1 (3) | C12—C13—C14—N13 | −2.1 (7) |
| O12—S11—N11—Cd1 | 140.9 (2) | O12—S11—C15—C16 | −20.1 (4) |
| O11—S11—N11—Cd1 | 14.2 (3) | O11—S11—C15—C16 | 105.1 (3) |
| C15—S11—N11—Cd1 | −100.1 (3) | N11—S11—C15—C16 | −142.2 (3) |
| O1—Cd1—N11—C11 | 137.0 (2) | O12—S11—C15—C20 | 168.7 (3) |
| O1i—Cd1—N11—C11 | 48.8 (3) | O11—S11—C15—C20 | −66.1 (4) |
| N11i—Cd1—N11—C11 | −75.9 (2) | N11—S11—C15—C20 | 46.6 (4) |
| N12—Cd1—N11—C11 | 5.6 (2) | C20—C15—C16—C17 | 2.6 (6) |
| N12i—Cd1—N11—C11 | −131.2 (2) | S11—C15—C16—C17 | −168.8 (3) |
| O1—Cd1—N11—S11 | −54.8 (3) | C15—C16—C17—C18 | −1.0 (7) |
| O1i—Cd1—N11—S11 | −142.9 (2) | C16—C17—C18—N14 | 179.3 (4) |
| N11i—Cd1—N11—S11 | 92.4 (3) | C16—C17—C18—C19 | −1.6 (6) |
| N12—Cd1—N11—S11 | 173.9 (3) | N14—C18—C19—C20 | −178.4 (4) |
| N12i—Cd1—N11—S11 | 37.1 (3) | C17—C18—C19—C20 | 2.5 (6) |
| O1—Cd1—N12—C12 | 125.0 (5) | C18—C19—C20—C15 | −0.9 (7) |
| O1i—Cd1—N12—C12 | 43.4 (5) | C16—C15—C20—C19 | −1.7 (7) |
| N11i—Cd1—N12—C12 | −55.0 (5) | S11—C15—C20—C19 | 169.7 (4) |
| N11—Cd1—N12—C12 | −163.1 (5) | O1i—Cd1—O1—S1' | −115.6 (4) |
| N12i—Cd1—N12—C12 | −101.8 (5) | N11i—Cd1—O1—S1' | −21.5 (4) |
| O1—Cd1—N12—C11 | −77.5 (2) | N11—Cd1—O1—S1' | 105.5 (4) |
| O1i—Cd1—N12—C11 | −159.1 (2) | N12—Cd1—O1—S1' | 158.5 (3) |
| N11i—Cd1—N12—C11 | 102.5 (2) | N12i—Cd1—O1—S1' | 13.1 (4) |
| N11—Cd1—N12—C11 | −5.6 (2) | O1i—Cd1—O1—S1 | −57.01 (18) |
| N12i—Cd1—N12—C11 | 55.66 (19) | N11i—Cd1—O1—S1 | 37.1 (3) |
| C14—N13—C11—N12 | 2.6 (6) | N11—Cd1—O1—S1 | 164.1 (2) |
| C14—N13—C11—N11 | −176.9 (4) | N12—Cd1—O1—S1 | −142.92 (18) |
| C12—N12—C11—N13 | −4.7 (6) | N12i—Cd1—O1—S1 | 71.8 (2) |
| Cd1—N12—C11—N13 | −171.2 (3) | S1'—O1—S1—C2 | −86.3 (4) |
| C12—N12—C11—N11 | 174.9 (3) | Cd1—O1—S1—C2 | 151.5 (4) |
| Cd1—N12—C11—N11 | 8.4 (3) | S1'—O1—S1—C1 | 19.5 (4) |
| S11—N11—C11—N13 | 0.0 (5) | Cd1—O1—S1—C1 | −102.7 (4) |
| Cd1—N11—C11—N13 | 170.5 (3) | S1—O1—S1'—C1' | −45.6 (7) |
| S11—N11—C11—N12 | −179.5 (3) | Cd1—O1—S1'—C1' | 50.6 (8) |
| Cd1—N11—C11—N12 | −9.1 (3) | S1—O1—S1'—C2' | 65.6 (7) |
| C11—N12—C12—C13 | 3.3 (6) | Cd1—O1—S1'—C2' | 161.8 (6) |
| Cd1—N12—C12—C13 | 157.7 (4) |
| H··· | ||||
| N14—H14A···N13ii | 0.94 (3) | 2.30 (3) | 3.168 (5) | 152 (4) |
| N14—H14B···O11iii | 0.95 (3) | 2.02 (3) | 2.967 (5) | 173 (4) |
Selected bond lengths (Å)
| Cd1—O1 | 2.268 (3) |
| Cd1—N11 | 2.305 (3) |
| Cd1—N12 | 2.452 (3) |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N14—H14 | 0.94 (3) | 2.30 (3) | 3.168 (5) | 152 (4) |
| N14—H14 | 0.95 (3) | 2.02 (3) | 2.967 (5) | 173 (4) |
Symmetry codes: (i) ; (ii) .