Literature DB >> 21742901

Genetic and biochemical map for the biosynthesis of occidiofungin, an antifungal produced by Burkholderia contaminans strain MS14.

Ganyu Gu1, Leif Smith, Aixin Liu, Shi-En Lu.   

Abstract

A striking feature of Burkholderia contaminans strain MS14 is the production of a glycolipopeptide named occidiofungin. Occidiofungin has a broad range of antifungal activities against plant and animal pathogens. In this study, a complete covalent structure characterization and identification of the whole genomic DNA region for the occidiofungin gene (ocf) cluster are described. Discovery of the presence of 2,4-diaminobutyric acid and 3-chloro-β-hydroxytyrosine and elucidation of the structure of a novel C(18) fatty amino acid residue have been achieved. In addition, seven additional putative open reading frames (the genes from ocfI to ocfN [ocfI-N] and ORF16) were identified. Transcription of all the putative genes ocfI-N identified in the region except ORF16 was regulated by both ambR1 and ambR2. Elucidation of the structure and the ocf gene cluster provides insight into the biosynthesis of occidiofungin and promotes future aims at understanding the biosynthetic machinery. This work provides new avenues for optimizing the production and synthesis of structural analogs of occidiofungin.

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Year:  2011        PMID: 21742901      PMCID: PMC3165383          DOI: 10.1128/AEM.00377-11

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   4.792


  39 in total

1.  Modular Peptide Synthetases Involved in Nonribosomal Peptide Synthesis.

Authors:  Mohamed A. Marahiel; Torsten Stachelhaus; Henning D. Mootz
Journal:  Chem Rev       Date:  1997-11-10       Impact factor: 60.622

2.  Synthetic and complex media for the rapid detection of fluorescence of phytopathogenic pseudomonads: effect of the carbon source.

Authors:  A K Vidaver
Journal:  Appl Microbiol       Date:  1967-11

3.  Biosynthesis of an antifungal oligopeptide in Burkholderia contaminans strain MS14.

Authors:  Ganyu Gu; Leif Smith; Nian Wang; Hui Wang; Shi-En Lu
Journal:  Biochem Biophys Res Commun       Date:  2009-01-22       Impact factor: 3.575

4.  Characterization of the salA, syrF, and syrG regulatory genes located at the right border of the syringomycin gene cluster of Pseudomonas syringae pv. syringae.

Authors:  Shi-En Lu; Brenda K Scholz-Schroeder; Dennis C Gross
Journal:  Mol Plant Microbe Interact       Date:  2002-01       Impact factor: 4.171

5.  NMRPipe: a multidimensional spectral processing system based on UNIX pipes.

Authors:  F Delaglio; S Grzesiek; G W Vuister; G Zhu; J Pfeifer; A Bax
Journal:  J Biomol NMR       Date:  1995-11       Impact factor: 2.835

6.  Biosynthetic gene cluster of the non-ribosomally synthesized cyclodepsipeptide skyllamycin: deciphering unprecedented ways of unusual hydroxylation reactions.

Authors:  Stefan Pohle; Christian Appelt; Mallorie Roux; Hans-Peter Fiedler; Roderich D Süssmuth
Journal:  J Am Chem Soc       Date:  2011-04-01       Impact factor: 15.419

7.  Comparison of diagnostic laboratory methods for identification of Burkholderia pseudomallei.

Authors:  Timothy J J Inglis; Adam Merritt; Glenys Chidlow; Max Aravena-Roman; Gerry Harnett
Journal:  J Clin Microbiol       Date:  2005-05       Impact factor: 5.948

8.  Occidiofungin, a unique antifungal glycopeptide produced by a strain of Burkholderia contaminans.

Authors:  Shi-En Lu; Jan Novak; Frank W Austin; Ganyu Gu; Dayna Ellis; Marion Kirk; Shawanda Wilson-Stanford; Marco Tonelli; Leif Smith
Journal:  Biochemistry       Date:  2009-09-08       Impact factor: 3.162

9.  InterProScan: protein domains identifier.

Authors:  E Quevillon; V Silventoinen; S Pillai; N Harte; N Mulder; R Apweiler; R Lopez
Journal:  Nucleic Acids Res       Date:  2005-07-01       Impact factor: 16.971

10.  Evaluation of genomic island predictors using a comparative genomics approach.

Authors:  Morgan G I Langille; William W L Hsiao; Fiona S L Brinkman
Journal:  BMC Bioinformatics       Date:  2008-08-05       Impact factor: 3.169

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  15 in total

1.  The Burkholderia contaminans MS14 ocfC gene encodes a xylosyltransferase for production of the antifungal occidiofungin.

Authors:  Kuan-Chih Chen; Akshaya Ravichandran; Adam Guerrero; Peng Deng; Sonya M Baird; Leif Smith; Shi-En Lu
Journal:  Appl Environ Microbiol       Date:  2013-02-22       Impact factor: 4.792

2.  Cloning and Analysis of Genes Controlling Antibacterial Activities of Burkholderia pyrrocinia Strain Lyc2.

Authors:  Xiaoqiang Wang; Dexin Chen; Jing Wang; Chao Feng; Wenjing Wang; Wei Zhang; Bin Li; Jiamin Yu; Bo Xia
Journal:  Curr Microbiol       Date:  2019-06-10       Impact factor: 2.188

Review 3.  Nonribosomal peptides and polyketides of Burkholderia: new compounds potentially implicated in biocontrol and pharmaceuticals.

Authors:  Qassim Esmaeel; Maude Pupin; Philippe Jacques; Valérie Leclère
Journal:  Environ Sci Pollut Res Int       Date:  2017-05-25       Impact factor: 4.223

4.  Burkholderia as a Source of Natural Products.

Authors:  Sylvia Kunakom; Alessandra S Eustáquio
Journal:  J Nat Prod       Date:  2019-07-11       Impact factor: 4.050

5.  Occidiofungin's chemical stability and in vitro potency against Candida species.

Authors:  Dayna Ellis; Jiten Gosai; Charles Emrick; Rachel Heintz; Lanette Romans; Donna Gordon; Shi-En Lu; Frank Austin; Leif Smith
Journal:  Antimicrob Agents Chemother       Date:  2011-11-21       Impact factor: 5.191

6.  The presence of two cyclase thioesterases expands the conformational freedom of the cyclic Peptide occidiofungin.

Authors:  Akshaya Ravichandran; Ganyu Gu; Jerome Escano; Shi-En Lu; Leif Smith
Journal:  J Nat Prod       Date:  2013-02-08       Impact factor: 4.050

7.  Burkholderia from Fungus Gardens of Fungus-Growing Ants Produces Antifungals That Inhibit the Specialized Parasite Escovopsis.

Authors:  Charlotte B Francoeur; Daniel S May; Margaret W Thairu; Don Q Hoang; Olivia Panthofer; Tim S Bugni; Mônica T Pupo; Jon Clardy; Adrián A Pinto-Tomás; Cameron R Currie
Journal:  Appl Environ Microbiol       Date:  2021-06-25       Impact factor: 4.792

8.  Draft Genome Sequence of Burkholderia pyrrocinia Lyc2, a Biological Control Strain That Can Suppress Multiple Plant Microbial Pathogens.

Authors:  Xiao-Qiang Wang; Kurt C Showmaker; Xiao-Qing Yu; Tao Bi; Chuan-Yu Hsu; Sonya M Baird; Daniel G Peterson; Xiang-Dong Li; Shi-En Lu
Journal:  Genome Announc       Date:  2014-10-02

9.  Identification of quorum sensing-controlled genes in Burkholderia ambifaria.

Authors:  Annelise Chapalain; Ludovic Vial; Natacha Laprade; Valérie Dekimpe; Jonathan Perreault; Eric Déziel
Journal:  Microbiologyopen       Date:  2013-02-05       Impact factor: 3.139

10.  The chemical arsenal of Burkholderia pseudomallei is essential for pathogenicity.

Authors:  John B Biggins; Hahk-Soo Kang; Melinda A Ternei; David DeShazer; Sean F Brady
Journal:  J Am Chem Soc       Date:  2014-06-24       Impact factor: 15.419

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