Literature DB >> 21719661

Comment on "The mechanism for activation of GTP hydrolysis on the ribosome".

Anders Liljas1, Måns Ehrenberg, Johan Åqvist.   

Abstract

Voorhees et al. (Reports, 5 November 2010, p. 835) determined the structure of elongation factor Tu (EF-Tu) and aminoacyl-transfer RNA bound to the ribosome with a guanosine triphosphate (GTP) analog. However, their identification of histidine-84 of EF-Tu as deprotonating the catalytic water molecule is problematic in relation to their atomic structure; the terminal phosphate of GTP is more likely to be the proper proton acceptor.

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Year:  2011        PMID: 21719661     DOI: 10.1126/science.1202472

Source DB:  PubMed          Journal:  Science        ISSN: 0036-8075            Impact factor:   47.728


  21 in total

1.  Crystal structure of release factor RF3 trapped in the GTP state on a rotated conformation of the ribosome.

Authors:  Jie Zhou; Laura Lancaster; Sergei Trakhanov; Harry F Noller
Journal:  RNA       Date:  2011-12-20       Impact factor: 4.942

2.  Structure of EF-G-ribosome complex in a pretranslocation state.

Authors:  Yun Chen; Shu Feng; Veerendra Kumar; Rya Ero; Yong-Gui Gao
Journal:  Nat Struct Mol Biol       Date:  2013-08-04       Impact factor: 15.369

3.  Translocation at work.

Authors:  John Achenbach; Knud H Nierhaus
Journal:  Nat Struct Mol Biol       Date:  2013-09       Impact factor: 15.369

4.  A monovalent cation acts as structural and catalytic cofactor in translational GTPases.

Authors:  Bernhard Kuhle; Ralf Ficner
Journal:  EMBO J       Date:  2014-09-15       Impact factor: 11.598

5.  EF-Tu and EF-G are activated by allosteric effects.

Authors:  Dibyendu Mondal; Arieh Warshel
Journal:  Proc Natl Acad Sci U S A       Date:  2018-03-12       Impact factor: 11.205

6.  Functional role of the sarcin-ricin loop of the 23S rRNA in the elongation cycle of protein synthesis.

Authors:  Xinying Shi; Prashant K Khade; Karissa Y Sanbonmatsu; Simpson Joseph
Journal:  J Mol Biol       Date:  2012-03-26       Impact factor: 5.469

Review 7.  Why nature really chose phosphate.

Authors:  Shina C L Kamerlin; Pankaz K Sharma; Ram B Prasad; Arieh Warshel
Journal:  Q Rev Biophys       Date:  2013-01-15       Impact factor: 5.318

8.  Energetics of activation of GTP hydrolysis on the ribosome.

Authors:  Göran Wallin; Shina C L Kamerlin; Johan Aqvist
Journal:  Nat Commun       Date:  2013       Impact factor: 14.919

9.  Revelation of a catalytic calcium-binding site elucidates unusual metal dependence of a human apyrase.

Authors:  David W Rooklin; Min Lu; Yingkai Zhang
Journal:  J Am Chem Soc       Date:  2012-09-10       Impact factor: 15.419

10.  Protein synthesis during cellular quiescence is inhibited by phosphorylation of a translational elongation factor.

Authors:  Sandro F F Pereira; Ruben L Gonzalez; Jonathan Dworkin
Journal:  Proc Natl Acad Sci U S A       Date:  2015-06-08       Impact factor: 11.205

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