Literature DB >> 21710172

Histological assessment of cerebellar granule cell layer in postmortem brain; a useful marker of tissue integrity?

Donna Sheedy1, Antony Harding, Meichien Say, Julia Stevens, Jillian J Kril.   

Abstract

Tissue quality control measures are routinely performed in brain banks with the assessment of brain pH being the most common measure. In some brain banks the assessment of the RNA integrity number is also performed, although this requires access to specialised equipment and is more expensive. The aim of this study is to determine if there is a correlation between the visual assessment of cerebellar granule cell integrity and brain pH or RIN. One hundred and five consecutive cases from the NSW Tissue Resource Centre, Sydney, Australia were accessed. The cerebrum was hemisected and one hemisphere sliced parasagittally at approximately 1-2 cm intervals and frozen. The other hemisphere was fixed in 15% buffered formalin for 2-3 weeks. The contralateral cerebellar hemisphere was preserved in the same manner as the cerebral hemisphere. Samples of fixed tissue were embedded in paraffin, 7 μm sections cut and stained routinely with hematoxylin and eosin. The granular cell layer (GCL) was assessed microscopically to determine the degree of autolytic degradation. Degradation was graded as nil, mild, moderate or severe. Brain tissue pH and RIN were measured using standardised protocols. This study showed that both brain pH and RIN significantly correlated with the severity of the degradation of the cerebellar granule cell layer. This additional screening tool can be performed during routine histological review of the cerebellar tissue to assess the suitability for further investigation of tissue quality.

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Year:  2011        PMID: 21710172      PMCID: PMC3454866          DOI: 10.1007/s10561-011-9265-1

Source DB:  PubMed          Journal:  Cell Tissue Bank        ISSN: 1389-9333            Impact factor:   1.522


  19 in total

1.  Evaluating RNA status for RT-PCR in extracts of postmortem human brain tissue.

Authors:  Christine L Miller; Suad Diglisic; Flora Leister; Maree Webster; Robert H Yolken
Journal:  Biotechniques       Date:  2004-04       Impact factor: 1.993

2.  The relative importance of premortem acidosis and postmortem interval for human brain gene expression studies: selective mRNA vulnerability and comparison with their encoded proteins.

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Journal:  Neurosci Lett       Date:  1995-11-24       Impact factor: 3.046

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Journal:  Acta Pathol Microbiol Scand A       Date:  1977-11

4.  Autolysis of the granular layer of the cerebellar cortex in brain death.

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Journal:  Acta Neuropathol       Date:  1986       Impact factor: 17.088

5.  A study of the rate of cell depletion in solid tissue.

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Journal:  J Pathol       Date:  1980-03       Impact factor: 7.996

6.  The pathogenesis of acute selective necrosis of the granular layer of the human cerebellar cortex.

Authors:  R Albrechtsen
Journal:  Acta Neuropathol       Date:  1977-01-31       Impact factor: 17.088

7.  Tissue pH as an indicator of mRNA preservation in human post-mortem brain.

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8.  Effect of agonal and postmortem factors on gene expression profile: quality control in microarray analyses of postmortem human brain.

Authors:  Hiroaki Tomita; Marquis P Vawter; David M Walsh; Simon J Evans; Prabhakara V Choudary; Jun Li; Kevin M Overman; Mary E Atz; Richard M Myers; Edward G Jones; Stanley J Watson; Huda Akil; William E Bunney
Journal:  Biol Psychiatry       Date:  2004-02-15       Impact factor: 13.382

9.  Selection of reference gene expression in a schizophrenia brain cohort.

Authors:  Cynthia Shannon Weickert; Donna Sheedy; Debora A Rothmond; Irina Dedova; Samantha Fung; Therese Garrick; Jenny Wong; Antony J Harding; Sinthuja Sivagnanansundaram; Clare Hunt; Carlotta Duncan; Nina Sundqvist; Shan-Yuan Tsai; Jasna Anand; Daren Draganic; Clive Harper
Journal:  Aust N Z J Psychiatry       Date:  2010-01       Impact factor: 5.744

10.  Phosphatidylinositol kinase is reduced in Alzheimer's disease.

Authors:  J Jolles; J Bothmer; M Markerink; R Ravid
Journal:  J Neurochem       Date:  1992-06       Impact factor: 5.372

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  5 in total

1.  An International Survey of Brain Banking Operation and Characterization Practices.

Authors:  Beatrix Palmer-Aronsten; Donna Sheedy; Toni McCrossin; Jillian Kril
Journal:  Biopreserv Biobank       Date:  2016-07-11       Impact factor: 2.300

Review 2.  Brain banking in low and middle-income countries: Raison D'être for the Ibadan Brain Ageing, Dementia And Neurodegeneration (IBADAN) Brain Bank Project.

Authors:  Rufus O Akinyemi; Ayodeji Salami; Joshua Akinyemi; Akin Ojagbemi; Funmi Olopade; Motunrayo Coker; Temitope Farombi; Michael Nweke; Oyedunni Arulogun; Ayodele Jegede; Mayowa Owolabi; Rajesh N Kalaria; Adesola Ogunniyi
Journal:  Brain Res Bull       Date:  2018-08-24       Impact factor: 4.077

3.  Limited predictability of postmortem human brain tissue quality by RNA integrity numbers.

Authors:  Kai-C Sonntag; George Tejada; Sivan Subburaju; Sabina Berretta; Francine M Benes; Tsung-Ung W Woo
Journal:  J Neurochem       Date:  2016-05-12       Impact factor: 5.372

4.  Man's best friend in life and death: scientific perspectives and challenges of dog brain banking.

Authors:  Sára Sándor; Kálmán Czeibert; Attila Salamon; Enikő Kubinyi
Journal:  Geroscience       Date:  2021-05-10       Impact factor: 7.713

5.  Quantification of nucleic acid quality in postmortem tissues from a cancer research autopsy program.

Authors:  Jun Fan; Raya Khanin; Hitomi Sakamoto; Yi Zhong; Chelsea Michael; Derwin Pena; Breanna Javier; Laura D Wood; Christine A Iacobuzio-Donahue
Journal:  Oncotarget       Date:  2016-10-11
  5 in total

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