Literature DB >> 21706661

Mesoscopic membrane physics: concepts, simulations, and selected applications.

Markus Deserno1.   

Abstract

The window of a few tens to a few hundred nanometers in length scale is a booming field in lipid membrane research, owing largely to two reasons. First, many exciting biophysical and cell biological processes take place within it. Second, experimental techniques manage to zoom in on this sub-optical scale, while computer simulations zoom out to system sizes previously unattainable, and both will be meeting soon. This paper reviews a selection of questions and concepts in this field and demonstrates that they can often be favorably addressed with highly simplified simulation models. Among the topics discussed are membrane adhesion to substrates, mixed lipid bilayers, lipid curvature coupling, pore formation by antimicrobial peptides, composition-driven protein aggregation, and curvature driven vesiculation.
Copyright © 2009 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

Entities:  

Year:  2009        PMID: 21706661     DOI: 10.1002/marc.200900090

Source DB:  PubMed          Journal:  Macromol Rapid Commun        ISSN: 1022-1336            Impact factor:   5.734


  15 in total

1.  Simulations show that virus assembly and budding are facilitated by membrane microdomains.

Authors:  Teresa Ruiz-Herrero; Michael F Hagan
Journal:  Biophys J       Date:  2015-02-03       Impact factor: 4.033

2.  Coarse-Grained Modeling of Pore Dynamics on the Red Blood Cell Membrane under Large Deformations.

Authors:  Meghdad Razizadeh; Mehdi Nikfar; Ratul Paul; Yaling Liu
Journal:  Biophys J       Date:  2020-06-24       Impact factor: 4.033

3.  Why Enveloped Viruses Need Cores-The Contribution of a Nucleocapsid Core to Viral Budding.

Authors:  Guillermo R Lázaro; Suchetana Mukhopadhyay; Michael F Hagan
Journal:  Biophys J       Date:  2018-02-06       Impact factor: 4.033

4.  Spontaneous Curvature, Differential Stress, and Bending Modulus of Asymmetric Lipid Membranes.

Authors:  Amirali Hossein; Markus Deserno
Journal:  Biophys J       Date:  2019-12-18       Impact factor: 4.033

Review 5.  Self-assembly of photosynthetic membranes.

Authors:  Jen Hsin; Danielle E Chandler; James Gumbart; Christopher B Harrison; Melih Sener; Johan Strumpfer; Klaus Schulten
Journal:  Chemphyschem       Date:  2010-04-26       Impact factor: 3.102

6.  Biophysics of membrane curvature remodeling at molecular and mesoscopic lengthscales.

Authors:  N Ramakrishnan; Ryan P Bradley; Richard W Tourdot; Ravi Radhakrishnan
Journal:  J Phys Condens Matter       Date:  2018-05-22       Impact factor: 2.333

7.  The Role of Packaging Sites in Efficient and Specific Virus Assembly.

Authors:  Jason D Perlmutter; Michael F Hagan
Journal:  J Mol Biol       Date:  2015-05-16       Impact factor: 5.469

8.  Finite-Size Effects in Simulations of Peptide/Lipid Assembly.

Authors:  Zack Jarin; Olivia Agolini; Richard W Pastor
Journal:  J Membr Biol       Date:  2022-07-19       Impact factor: 2.426

9.  Simulation Best Practices for Lipid Membranes [Article v1.0].

Authors:  David J Smith; Jeffery B Klauda; Alexander J Sodt
Journal:  Living J Comput Mol Sci       Date:  2019-01-09

10.  A systematically coarse-grained solvent-free model for quantitative phospholipid bilayer simulations.

Authors:  Zun-Jing Wang; Markus Deserno
Journal:  J Phys Chem B       Date:  2010-09-02       Impact factor: 2.991

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