Literature DB >> 21705661

Five phosphonate operon gene products as components of a multi-subunit complex of the carbon-phosphorus lyase pathway.

Bjarne Jochimsen1, Signe Lolle, Fern R McSorley, Mariah Nabi, Jens Stougaard, David L Zechel, Bjarne Hove-Jensen.   

Abstract

Organophosphonate utilization by Escherichia coli requires the 14 cistrons of the phnCDEFGHIJKLMNOP operon, of which the carbon-phosphorus lyase has been postulated to consist of the seven polypeptides specified by phnG to phnM. A 5,660-bp DNA fragment encompassing phnGHIJKLM is cloned, followed by expression in E. coli and purification of Phn-polypeptides. PhnG, PhnH, PhnI, PhnJ, and PhnK copurify as a protein complex by ion-exchange, size-exclusion, and affinity chromatography. The five polypeptides also comigrate in native-PAGE. Cross-linking of the purified protein complex reveals a close proximity of PhnG, PhnI, PhnJ, and PhnK, as these subunits disappear concomitant with the formation of large cross-linked protein complexes. Two molecular forms are identified, a major form of molecular mass of approximately 260 kDa, a minor form of approximately 640 kDa. The stoichiometry of the protein complex is suggested to be PhnG(4)H(2)I(2)J(2)K. Deletion of individual phn genes reveals that a strain harboring plasmid-borne phnGHIJ produces a protein complex consisting of PhnG, PhnH, PhnI, and PhnJ, whereas a strain harboring plasmid-borne phnGIJK produces a protein complex consisting of PhnG and PhnI. We conclude that phnGHIJK specify a soluble multisubunit protein complex essential for organophosphonate utilization.

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Year:  2011        PMID: 21705661      PMCID: PMC3136323          DOI: 10.1073/pnas.1104922108

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  25 in total

Review 1.  Subunit interactions in ABC transporters: towards a functional architecture.

Authors:  P M Jones; A M George
Journal:  FEMS Microbiol Lett       Date:  1999-10-15       Impact factor: 2.742

2.  Molecular analysis of the cryptic and functional phn operons for phosphonate use in Escherichia coli K-12.

Authors:  K Makino; S K Kim; H Shinagawa; M Amemura; A Nakata
Journal:  J Bacteriol       Date:  1991-04       Impact factor: 3.490

3.  Functional annotation and kinetic characterization of PhnO from Salmonella enterica.

Authors:  James C Errey; John S Blanchard
Journal:  Biochemistry       Date:  2006-03-07       Impact factor: 3.162

4.  A role for mRNA secondary structure in the control of translation initiation.

Authors:  M N Hall; J Gabay; M Débarbouillé; M Schwartz
Journal:  Nature       Date:  1982-02-18       Impact factor: 49.962

5.  Global analysis of proteins synthesized during phosphorus restriction in Escherichia coli.

Authors:  R A VanBogelen; E R Olson; B L Wanner; F C Neidhardt
Journal:  J Bacteriol       Date:  1996-08       Impact factor: 3.490

6.  Rhizobium (Sinorhizobium) meliloti phn genes: characterization and identification of their protein products.

Authors:  G F Parker; T P Higgins; T Hawkes; R L Robson
Journal:  J Bacteriol       Date:  1999-01       Impact factor: 3.490

Review 7.  Molecular genetics of carbon-phosphorus bond cleavage in bacteria.

Authors:  B L Wanner
Journal:  Biodegradation       Date:  1994-12       Impact factor: 3.909

8.  Mutational analysis of an Escherichia coli fourteen-gene operon for phosphonate degradation, using TnphoA' elements.

Authors:  W W Metcalf; B L Wanner
Journal:  J Bacteriol       Date:  1993-06       Impact factor: 3.490

9.  Phosphate-independent expression of the carbon-phosphorus lyase activity of Escherichia coli.

Authors:  G M Yakovleva; S K Kim; B L Wanner
Journal:  Appl Microbiol Biotechnol       Date:  1998-05       Impact factor: 4.813

10.  Identification of the enzymatic reactions encoded by the purG and purI genes of Escherichia coli.

Authors:  U Houlberg; B Hove-Jensen; B Jochimsen; P Nygaard
Journal:  J Bacteriol       Date:  1983-06       Impact factor: 3.490

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  26 in total

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Authors:  Mohamed I Hassan; Fern R McSorley; Kinya Hotta; Christopher N Boddy
Journal:  J Vis Exp       Date:  2017-06-27       Impact factor: 1.355

2.  Structure of the Escherichia coli phosphonate binding protein PhnD and rationally optimized phosphonate biosensors.

Authors:  Ismael Alicea; Jonathan S Marvin; Aleksandr E Miklos; Andrew D Ellington; Loren L Looger; Eric R Schreiter
Journal:  J Mol Biol       Date:  2011-10-12       Impact factor: 5.469

3.  Antibodies to PhnD inhibit staphylococcal biofilms.

Authors:  Hubert Lam; Augustus Kesselly; Svetlana Stegalkina; Harry Kleanthous; Jeremy A Yethon
Journal:  Infect Immun       Date:  2014-06-23       Impact factor: 3.441

4.  Efflux as a glutaraldehyde resistance mechanism in Pseudomonas fluorescens and Pseudomonas aeruginosa biofilms.

Authors:  Amit Vikram; Jennifer M Bomberger; Kyle J Bibby
Journal:  Antimicrob Agents Chemother       Date:  2015-03-30       Impact factor: 5.191

5.  Activation of the cryptic PhnE permease promotes rapid adaptive evolution in a population of Escherichia coli K-12 starved for phosphate.

Authors:  Mélanie L Guillemet; Patrice L Moreau
Journal:  J Bacteriol       Date:  2011-11-04       Impact factor: 3.490

Review 6.  Utilization of glyphosate as phosphate source: biochemistry and genetics of bacterial carbon-phosphorus lyase.

Authors:  Bjarne Hove-Jensen; David L Zechel; Bjarne Jochimsen
Journal:  Microbiol Mol Biol Rev       Date:  2014-03       Impact factor: 11.056

7.  Structures of the Carbon-Phosphorus Lyase Complex Reveal the Binding Mode of the NBD-like PhnK.

Authors:  Kailu Yang; Zhongjie Ren; Frank M Raushel; Junjie Zhang
Journal:  Structure       Date:  2015-12-24       Impact factor: 5.006

Review 8.  Organophosphonates revealed: new insights into the microbial metabolism of ancient molecules.

Authors:  John W McGrath; Jason P Chin; John P Quinn
Journal:  Nat Rev Microbiol       Date:  2013-04-29       Impact factor: 60.633

Review 9.  Phosphonate biosynthesis and catabolism: a treasure trove of unusual enzymology.

Authors:  Spencer C Peck; Wilfred A van der Donk
Journal:  Curr Opin Chem Biol       Date:  2013-07-17       Impact factor: 8.822

10.  Sublethal detergent concentrations increase metabolization of recalcitrant polyphosphonates by the cyanobacterium Spirulina platensis.

Authors:  Giuseppe Forlani; Michele Bertazzini; Samuele Giberti; Dorota Wieczorek; Paweł Kafarski; Jacek Lipok
Journal:  Environ Sci Pollut Res Int       Date:  2012-10-23       Impact factor: 4.223

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