Literature DB >> 21700350

Varying virulence: epigenetic control of expression noise and disease processes.

Kathryn Miller-Jensen1, Siddharth S Dey, David V Schaffer, Adam P Arkin.   

Abstract

Gene expression noise is a significant source of phenotypic heterogeneity in otherwise identical populations of cells. Phenotypic heterogeneity can cause reversible drug resistance in diseased cells, and thus a better understanding of its origins might improve treatment strategies. In eukaryotes, data strongly suggest that intrinsic noise arises from transcriptional bursts caused by slow, random transitions between inactive and active gene states that are mediated by chromatin remodeling. In this review, we consider how chromatin modifications might modulate gene expression noise and lead to phenotypic diversity in diseases as varied as viral infection and cancer. Additionally, we argue that this fundamental information can be applied to develop innovative therapies that counteract 'pathogenic noise' and sensitize all diseased cells to therapeutic intervention.
Copyright © 2011 Elsevier Ltd. All rights reserved.

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Year:  2011        PMID: 21700350     DOI: 10.1016/j.tibtech.2011.05.004

Source DB:  PubMed          Journal:  Trends Biotechnol        ISSN: 0167-7799            Impact factor:   19.536


  31 in total

1.  Analytical distribution and tunability of noise in a model of promoter progress.

Authors:  Jiajun Zhang; Luonan Chen; Tianshou Zhou
Journal:  Biophys J       Date:  2012-03-20       Impact factor: 4.033

2.  DNA-Binding Kinetics Determines the Mechanism of Noise-Induced Switching in Gene Networks.

Authors:  Margaret J Tse; Brian K Chu; Mahua Roy; Elizabeth L Read
Journal:  Biophys J       Date:  2015-10-20       Impact factor: 4.033

Review 3.  A functional perspective on phenotypic heterogeneity in microorganisms.

Authors:  Martin Ackermann
Journal:  Nat Rev Microbiol       Date:  2015-07-06       Impact factor: 60.633

Review 4.  Stochastic developmental variation, an epigenetic source of phenotypic diversity with far-reaching biological consequences.

Authors:  Günter Vogt
Journal:  J Biosci       Date:  2015-03       Impact factor: 1.826

5.  Regulated noise in the epigenetic landscape of development and disease.

Authors:  Elisabet Pujadas; Andrew P Feinberg
Journal:  Cell       Date:  2012-03-16       Impact factor: 41.582

6.  An effective method for computing the noise in biochemical networks.

Authors:  Jiajun Zhang; Qing Nie; Miao He; Tianshou Zhou
Journal:  J Chem Phys       Date:  2013-02-28       Impact factor: 3.488

7.  Stem cell differentiation as a many-body problem.

Authors:  Bin Zhang; Peter G Wolynes
Journal:  Proc Natl Acad Sci U S A       Date:  2014-06-19       Impact factor: 11.205

8.  Promoter-mediated transcriptional dynamics.

Authors:  Jiajun Zhang; Tianshou Zhou
Journal:  Biophys J       Date:  2014-01-21       Impact factor: 4.033

9.  Chromatin accessibility at the HIV LTR promoter sets a threshold for NF-κB mediated viral gene expression.

Authors:  Kathryn Miller-Jensen; Siddharth S Dey; Nhung Pham; Jonathan E Foley; Adam P Arkin; David V Schaffer
Journal:  Integr Biol (Camb)       Date:  2012-05-03       Impact factor: 2.192

10.  Stochastic multistationarity in a model of the hematopoietic stem cell differentiation network.

Authors:  M Ali Al-Radhawi; Nithin S Kumar; Eduardo D Sontag; Domitilla Del Vecchio
Journal:  Proc IEEE Conf Decis Control       Date:  2019-01-21
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