| Literature DB >> 21693051 |
John R Goffin1, Greg R Pond, Dongsheng Tu.
Abstract
BACKGROUND: Response rate (RR) alone may be insensitive to drug activity in phase II trials. Early progressive disease (EPD) could improve sensitivity as well as increase stage I stopping rates. This study compares the previously developed dual endpoint stopping rule (DESR), which incorporates both RR and EPD into a two-stage, phase II trial, with rules using only RR.Entities:
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Year: 2011 PMID: 21693051 PMCID: PMC3138426 DOI: 10.1186/1471-2288-11-95
Source DB: PubMed Journal: BMC Med Res Methodol ISSN: 1471-2288 Impact factor: 4.615
Thresholds by DESR to compare with rules of Fleming (n1 = 15, n2 = 15, power = 0.8, alpha = 0.05)
| Response | Early Progression | Stage 1 Drug Rejection | Stage 2 Drug Acceptance | Power | Alpha Error | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.2 | 0.05 | 0.4 | 0.6 | ≤1/15 | ≥8/15 | ≥4/30 | ≤14/30 | 0.796 | 0.025 | 16.4/0.90 | 27.7/0.15 |
| 0.2 | 0.05 | 0.3 | 0.5 | ≤1/15 | ≥6/15 | ≥4/30 | ≤11/30 | 0.785 | 0.025 | 16.2/0.92 | 27.4/0.17 |
ENnul = expected number of patients accrued if a drug meets the criteria of the null hypothesis
ENalt = expected number of patients accrued if a drug meets the criteria of the alternate hypothesis
PESnul = probability of stopping the trial after stage I if a drug meets the criteria of the null hypothesis
PESalt = probability of stopping the trial after stage I if a drug meets the criteria of the alternate hypothesis
Thresholds by DESR to compare with the rules of Gehan (ralt = 0.2, rnul = 0.05, epdalt = 0.4, epdnul = 0.6, power = 0.8, alpha = 0.05)
| Study Size | Stage 1 Drug Rejection | Stage 2 Drug Acceptance | Power | Alpha Error | |||||
|---|---|---|---|---|---|---|---|---|---|
| 14 | 1 | ≤1/14 | ≥8/14 | ≥2/17 | ≤7/17 | 0.835 | 0.089 | 14.1/0.89 | 14.9/0.14 |
| 14 | 3 | ≤1/14 | ≥8/14 | ≥2/17 | ≤9/17 | 0.855 | 0.101 | 14.3/0.89 | 17.0/0.008 |
| 14 | 4 | ≤1/14 | ≥8/14 | ≥3/18 | ≤9/18 | 0.797 | 0.051 | 14.4/0.89 | 17.4/0.14 |
| 14 | 5 | ≤1/14 | ≥8/14 | ≥3/19 | ≤9/19 | 0.787 | 0.041 | 14.6/0.89 | 18.3/0.14 |
| 14 | 6 | ≤1/14 | ≥8/14 | ≥3/20 | ≤9/20 | 0.776 | 0.034 | 14.7/0.89 | 19.2/0.14 |
| 14 | 9 | ≤1/14 | ≥8/14 | ≥3/23 | ≤11/23 | 0.814 | 0.04 | 15.0/0.89 | 21.7/0.14 |
| 14 | 10 | ≤1/14 | ≥8/14 | ≥3/24 | ≤12/24 | 0.829 | 0.046 | 15.1/0.89 | 23.9/0.008 |
| 14 | 11 | ≤1/14 | ≥8/14 | ≥4/25 | ≤12/25 | 0.779 | 0.035 | 15.2/0.89 | 24.9/0.008 |
| 14 | 13 | ≤1/14 | ≥8/14 | ≥4/27 | ≤14/27 | 0.817 | 0.032 | 15.4/0.89 | 25.2/0.14 |
| 14 | 15 | ≤1/14 | ≥8/14 | ≥4/29 | ≤14/29 | 0.807 | 0.032 | 15.7/0.89 | 26.9/0.14 |
| 14 | 16 | ≤1/14 | ≥8/14 | ≥4/30 | ≤14/30 | 0.8 | 0.027 | 15.8/0.89 | 27.8/0.14 |
| 14 | 18 | ≤1/14 | ≥8/14 | ≥4/32 | ≤16/32 | 0.829 | 0.026 | 16.0/0.89 | 29.5/0.14 |
| 14 | 20 | ≤1/14 | ≥8/14 | ≥5/34 | ≤17/34 | 0.809 | 0.0174 | 16.2/0.89 | 31.2/0.14 |
| 14 | 21 | ≤1/14 | ≥8/14 | ≥5/35 | ≤17/35 | 0.804 | 0.021 | 16.3/0.89 | 32.0/0.14 |
| 14 | 22 | ≤1/14 | ≥8/14 | ≥5/36 | ≤19/36 | 0.83 | 0.024 | 16.4/0.89 | 32.9/0.14 |
| 14 | 23 | ≤1/14 | ≥8/14 | ≥5/37 | ≤19/37 | 0.828 | 0.02 | 16.5/0.89 | 33.8/0.14 |
ENnul = expected number of patients accrued if a drug meets the criteria of the null hypothesis
ENalt = expected number of patients accrued if a drug meets the criteria of the alternate hypothesis
PESnul = probability of stopping the trial after stage I if a drug meets the criteria of the null hypothesis
PESalt = probability of stopping the trial after stage I if a drug meets the criteria of the alternate hypothesis
Thresholds by DESR to compare with rules of Gehan (ralt = 0.2, rnul = 0.05, epdalt = 0.3, epdnul = 0.5, power = 0.8, alpha = 0.05)
| Study Size | Stage 1 Drug Rejection | Stage 2 Drug Acceptance | Power | Alpha Error | |||||
|---|---|---|---|---|---|---|---|---|---|
| 14 | 1 | ≤1/14 | ≥6/14 | ≥2/17 | ≤5/17 | 0.811 | 0.075 | 14.1/0.91 | 14.8/0.17 |
| 14 | 3 | ≤1/14 | ≥6/14 | ≥3/17 | ≤7/17 | 0. 773 | 0.043 | 14.3/0.91 | 16.5/0.17 |
| 14 | 4 | ≤1/14 | ≥6/14 | ≥3/18 | ≤7/18 | 0.775 | 0.038 | 14.3/0.91 | 17.3/0.17 |
| 14 | 5 | ≤1/14 | ≥6/14 | ≥3/19 | ≤7/19 | 0.773 | 0.034 | 14.4/0.92 | 18.2/0.17 |
| 14 | 6 | ≤1/14 | ≥6/14 | ≥3/20 | ≤7/20 | 0.769 | 0.031 | 14.5/0.91 | 19.0/0.17 |
| 14 | 9 | ≤1/14 | ≥6/14 | ≥3/23 | ≤9/23 | 0.805 | 0.038 | 14.8/0.91 | 21.5/0.17 |
| 14 | 10 | ≤1/14 | ≥6/14 | ≥4/24 | ≤9/24 | 0.753 | 0.026 | 14.9/0.91 | 22.3/0.17 |
| 14 | 11 | ≤1/14 | ≥6/14 | ≥3/25 | ≤9/25 | 0.797 | 0.033 | 14.9/0.91 | 23.2/0.17 |
| 14 | 13 | ≤1/14 | ≥6/14 | ≥4/27 | ≤11/27 | 0.791 | 0.023 | 15.1/0.91 | 24.8/0.17 |
| 14 | 15 | ≤1/14 | ≥6/14 | ≥4/29 | ≤11/29 | 0.789 | 0.024 | 15.3/0.91 | 26.5/0.17 |
| 14 | 16 | ≤1/14 | ≥6/14 | ≥4/30 | ≤11/30 | 0.787 | 0.028 | 15.4/0.91 | 27.3/0.17 |
| 14 | 18 | ≤1/14 | ≥6/14 | ≥4/32 | ≤13/32 | 0.811 | 0.023 | 15.5/0.91 | 29.0/0.17 |
| 14 | 20 | ≤1/14 | ≥6/14 | ≥5/34 | ≤13/34 | 0.781 | 0.015 | 15.7/0.91 | 30.7/0.17 |
| 14 | 21 | ≤1/14 | ≥6/14 | ≥5/35 | ≤13/35 | 0.779 | 0.013 | 15.8/0.91 | 31.5/0.17 |
| 14 | 22 | ≤1/14 | ≥6/14 | ≥5/36 | ≤15/36 | 0.803 | 0.016 | 15.9/0.91 | 32.3/0.17 |
| 14 | 23 | ≤1/14 | ≥6/14 | ≥5/37 | ≤15/37 | 0.804 | 0.014 | 16.0/0.91 | 33.2/0.17 |
ENnul = expected number of patients accrued if a drug meets the criteria of the null hypothesis
ENalt = expected number of patients accrued if a drug meets the criteria of the alternate hypothesis
PESnul = probability of stopping the trial after stage I if a drug meets the criteria of the null hypothesis
PESalt = probability of stopping the trial after stage I if a drug meets the criteria of the alternate hypothesis
Comparison of the DESR and Fleming for Early Stopping and Rejection of Hnul
| Stage II* | Stage I Stop? | Drug Activity | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 0 | 6 | Y | N | Y | N | P | N | ||
| 2 | 0 | 1 | Y | N | N | N | P | P | ||
| 3 | 0 | 10 | Y | Y | Y | N | N | N | ||
| 4 | 0 | 7 | Y | N | Y | N | P | N | ||
| 5 | 0 | 9 | Y | Y | Y | N | N | N | ||
| 6 | 0 | 14 | Y | Y | Y | N | N | N | ||
| 7 | 0/14 | 7/14 | Y | N | Y | N | P | N | ||
| 8 | 0 | 6 | Y | N | Y | N | P | N | ||
| 9 | 0 | 3 | Y | N | N | N | P | P | ||
| 10 | 0 | 12 | Y | Y | Y | N | N | N | ||
| 11 | 1 | 9 | N | Y | Y | ? | N | N | ||
| 12 | 7 | 6 | 13/30 | 13/30 | N | N | N | |||
| 13 | 1 | 6 | 1/25 | 12/25 | N | N | Y | N | N | |
| 14 | 1 | 6 | 3/30 | 13/30 | N | N | Y | N | N | |
| 15 | 2 | 4 | 2/30 | 8/30 | N | N | N | N | ||
| 16 | 1 | 6 | 4/29 | 12/29 | N | N | Y | N | ||
aActual trial results.
DESR epd 0.4/0.6 = Dual Endpoint Stopping Rule epdalt = 0.4, epdnul = 0.6
DESR epd 0.3/0.5 = Dual Endpoint Stopping Rule epdalt = 0.3, epdnul = 0.5
Flem = result according to rules of Fleming
Prog = Progression
Res = Response
Y, N, P = Yes, No, Possible
Comparison of the DESR and Gehan for Early Stopping and Rejection of Hnul
| Stage I Stop? | Drug Activity | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 0 | 14 | 0/23 | 20/23 | Y | Y | Y | N | N | N |
| 2 | 0 | 10 | 0/24 | 18/24 | Y | Y | Y | N | N | N |
| 3 | 0 | 9 | 0/17 | 10/17 | Y | Y | Y | N | N | N |
| 4 | 0 | 8 | 0/36 | 23/36 | Y | Y | Y | N | N | N |
| 5 | 0 | 11 | 0/19 | 14/19 | Y | Y | Y | N | N | N |
| 6 | 0 | 13 | 0/23 | 20/23 | Y | Y | Y | N | N | N |
| 7 | 0 | 11 | 0/15 | 12/15 | Y | Y | Y | N | N | N |
| 8 | 0 | 11 | Y | Y | Y | N | N | N | ||
| 9 | 1 | 12 | 2/34 | 23/34 | N | Y | Y | N | N | N |
| 10 | 1 | 8 | 2/27 | 16/27 | N | Y | Y | N | N | N |
| 11 | 1 | 10 | 1/19 | 12/19 | N | Y | Y | N | N | N |
| 12 | 1 | 10 | 2/25 | 17/25 | N | Y | Y | N | N | N |
| 13 | 1 | 10 | 1/20 | 15/20 | N | Y | Y | N | N | N |
| 14 | 1 | 9 | 1/17 | 11/17 | N | Y | Y | N | N | N |
| 15 | 1 | 12 | 1/18 | 16/18 | N | Y | Y | N | N | N |
| 16 | 4 | 9 | 7/29 | 14/29 | N | N | N | Y | Y | Y |
| 17 | 8 | 2 | 20/34 | 3/34 | N | N | N | Y | Y | Y |
| 18 | 5 | 4 | 7/32 | 13/32 | N | N | N | Y | Y | Y |
| 19 | 4 | 4 | 12/37 | 14/37 | N | N | N | Y | Y | Y |
| 20 | 4 | 3 | 7/30 | 11/30 | N | N | N | Y | Y | Y |
| 21 | 5 | 4 | 9/36 | 9/36 | N | N | N | Y | Y | Y |
| 22 | 3 | 4 | 6/27 | 10/27 | N | N | N | Y | Y | Y |
| 23 | 11 | 1 | 27/35 | 3/35 | N | N | N | Y | Y | Y |
aActual trial results.
DESR epd 0.4/0.6 = Dual Endpoint Stopping Rule epdalt = 0.4, epdnul = 0.6
DESR epd 0.3/0.5 = Dual Endpoint Stopping Rule epdalt = 0.3, epdnul = 0.5
Prog = Progression
Res = Response
Y, N, P = Yes, No, Possible