Literature DB >> 2168561

Pathway of proton transfer in bacterial reaction centers: replacement of serine-L223 by alanine inhibits electron and proton transfers associated with reduction of quinone to dihydroquinone.

M L Paddock1, P H McPherson, G Feher, M Y Okamura.   

Abstract

The pathway of proton transfer in the reaction center (RC) from Rhodobacter sphaeroides was investigated by site-directed mutagenesis. Ser-L223, a putative proton donor that forms a hydrogen bond with the secondary quinone acceptor QB, was replaced with Ala and Thr. RCs with Ala-L223 displayed reduced electron transfer and proton uptake rates in the reaction QA-QB- + 2H+----QAQBH2. The rate constant for this reaction, k(2)AB, was found to be reduced approximately 350-fold to 4.0 +/- 0.2 s-1. Proton uptake measurements using a pH indicator dye showed a rapid uptake of 1 H+ per RC followed by a slower uptake of 1 H+ per RC at a rate of 4.1 +/- 0.1 s-1; native RCs showed a rapid uptake of 2H+ per RC. Evidence is provided that these changes were not due to gross structural changes in the binding site of QB. RCs with Thr-L223 showed little reduction in the rates of electron and proton transfer. These results indicate that proton transfer from the hydroxyl group of Ser-L223 or Thr-L223 is required for fast electron and proton transfer associated with the formation of the dihydroquinone QH2. In contrast, previous work showed that replacing Glu-L212, another putative proton donor to QB, with Gln slowed proton uptake from solution without significantly altering electron transfer. We propose a model that involves two distinct proton transfer steps. The first step occurs prior to transfer of the second electron to QB and involves proton transfer from Ser-L223. The second step occurs after this electron transfer through a pathway involving Glu-L212.

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Year:  1990        PMID: 2168561      PMCID: PMC54626          DOI: 10.1073/pnas.87.17.6803

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  7 in total

1.  First glance on the three-dimensional structure of the photosynthetic reaction center from a herbicide-resistant Rhodopseudomonas viridis mutant.

Authors:  I Sinning; J Koepke; B Schiller; H Michel
Journal:  Z Naturforsch C J Biosci       Date:  1990-05

2.  Structure of the reaction center from Rhodobacter sphaeroides R-26: protein-cofactor (quinones and Fe2+) interactions.

Authors:  J P Allen; G Feher; T O Yeates; H Komiya; D C Rees
Journal:  Proc Natl Acad Sci U S A       Date:  1988-11       Impact factor: 11.205

3.  Proton conduction through proteins: an overview of theoretical principles and applications.

Authors:  Z Schulten; K Schulten
Journal:  Methods Enzymol       Date:  1986       Impact factor: 1.600

4.  Pathway of proton transfer in bacterial reaction centers: replacement of glutamic acid 212 in the L subunit by glutamine inhibits quinone (secondary acceptor) turnover.

Authors:  M L Paddock; S H Rongey; G Feher; M Y Okamura
Journal:  Proc Natl Acad Sci U S A       Date:  1989-09       Impact factor: 11.205

Review 5.  The electronic structure of Fe2+ in reaction centers from Rhodopseudomonas sphaeroides. III. EPR measurements of the reduced acceptor complex.

Authors:  W F Butler; R Calvo; D R Fredkin; R A Isaacson; M Y Okamura; G Feher
Journal:  Biophys J       Date:  1984-05       Impact factor: 4.033

Review 6.  Hydrogen bonded chain mechanisms for proton conduction and proton pumping.

Authors:  J F Nagle; S Tristram-Nagle
Journal:  J Membr Biol       Date:  1983       Impact factor: 1.843

7.  Electron transfer in reaction centers of Rhodopseudomonas sphaeroides. I. Determination of the charge recombination pathway of D+QAQ(-)B and free energy and kinetic relations between Q(-)AQB and QAQ(-)B.

Authors:  D Kleinfeld; M Y Okamura; G Feher
Journal:  Biochim Biophys Acta       Date:  1984-07-27
  7 in total
  28 in total

1.  Characterization of a symmetrized mutant RC with 42 residues from the QA site replacing residues in the Q(B) site.

Authors:  J Li; W J Coleman; D C Youvan; M R Gunner
Journal:  Photosynth Res       Date:  2000       Impact factor: 3.573

2.  Molecular dynamics of a protein surface: ion-residues interactions.

Authors:  Ran Friedman; Esther Nachliel; Menachem Gutman
Journal:  Biophys J       Date:  2005-05-13       Impact factor: 4.033

3.  Multiple scattering x-ray absorption studies of Zn2+ binding sites in bacterial photosynthetic reaction centers.

Authors:  Lisa Giachini; Francesco Francia; Antonia Mallardi; Gerardo Palazzo; Emilio Carpenè; Federico Boscherini; Giovanni Venturoli
Journal:  Biophys J       Date:  2004-12-21       Impact factor: 4.033

4.  ENDOR spectroscopy reveals light induced movement of the H-bond from Ser-L223 upon forming the semiquinone (Q(B)(-)(*)) in reaction centers from Rhodobacter sphaeroides.

Authors:  M L Paddock; M Flores; R Isaacson; C Chang; E C Abresch; M Y Okamura
Journal:  Biochemistry       Date:  2007-06-23       Impact factor: 3.162

5.  Favoured carbonyl binding regions around the QA and Q B sites of Rps. viridis.

Authors:  P J O'Malley; C J Braithwaite
Journal:  Photosynth Res       Date:  1994-01       Impact factor: 3.573

6.  George Feher: a pioneer in reaction center research.

Authors:  Melvin Okamura
Journal:  Photosynth Res       Date:  2013-10-09       Impact factor: 3.573

Review 7.  Investigating the mechanisms of photosynthetic proteins using continuum electrostatics.

Authors:  G Matthias Ullmann; Edda Kloppmann; Timm Essigke; Eva-Maria Krammer; Astrid R Klingen; Torsten Becker; Elisa Bombarda
Journal:  Photosynth Res       Date:  2008-05-14       Impact factor: 3.573

8.  Second-site mutation at M43 (Asn→Asp) compensates for the loss of two acidic residues in the QB site of the reaction center.

Authors:  D K Hanson; S L Nance; M Schiffer
Journal:  Photosynth Res       Date:  1992-05       Impact factor: 3.573

9.  Kinetics of H+ ion binding by the P+QA-state of bacterial photosynthetic reaction centers: rate limitation within the protein.

Authors:  P Maróti; C A Wraight
Journal:  Biophys J       Date:  1997-07       Impact factor: 4.033

10.  Proton conduction within the reaction centers of Rhodobacter capsulatus: the electrostatic role of the protein.

Authors:  P Maróti; D K Hanson; L Baciou; M Schiffer; P Sebban
Journal:  Proc Natl Acad Sci U S A       Date:  1994-06-07       Impact factor: 11.205

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