Literature DB >> 21685279

Complete genome sequence of the plant pathogen Ralstonia solanacearum strain Po82.

Jin Xu1, Hua-jun Zheng, Lei Liu, Zhe-chao Pan, Philippe Prior, Biao Tang, Jing-sheng Xu, Hao Zhang, Qian Tian, Li-qing Zhang, Jie Feng.   

Abstract

Ralstonia solanacearum strain Po82, a phylotype IIB/sequevar 4 strain, was found to be pathogenic to both solanaceous plants and banana. Here, we report the complete genome sequence of Po82 and its comparison with seven published R. solanacearum genomes.

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Year:  2011        PMID： 21685279      PMCID： PMC3147697          DOI： 10.1128/JB.05384-11

Source DB:  PubMed          Journal:  J Bacteriol        ISSN： 0021-9193            Impact factor:   3.490


  8 in total

1.  GeneMarkS: a self-training method for prediction of gene starts in microbial genomes. Implications for finding sequence motifs in regulatory regions.

Authors:  J Besemer; A Lomsadze; M Borodovsky
Journal:  Nucleic Acids Res       Date:  2001-06-15       Impact factor: 16.971

2.  Improved microbial gene identification with GLIMMER.

Authors:  A L Delcher; D Harmon; S Kasif; O White; S L Salzberg
Journal:  Nucleic Acids Res       Date:  1999-12-01       Impact factor: 16.971

3.  The COG database: a tool for genome-scale analysis of protein functions and evolution.

Authors:  R L Tatusov; M Y Galperin; D A Natale; E V Koonin
Journal:  Nucleic Acids Res       Date:  2000-01-01       Impact factor: 16.971

4.  Genome sequencing in microfabricated high-density picolitre reactors.

Authors:  Marcel Margulies; Michael Egholm; William E Altman; Said Attiya; Joel S Bader; Lisa A Bemben; Jan Berka; Michael S Braverman; Yi-Ju Chen; Zhoutao Chen; Scott B Dewell; Lei Du; Joseph M Fierro; Xavier V Gomes; Brian C Godwin; Wen He; Scott Helgesen; Chun Heen Ho; Chun He Ho; Gerard P Irzyk; Szilveszter C Jando; Maria L I Alenquer; Thomas P Jarvie; Kshama B Jirage; Jong-Bum Kim; James R Knight; Janna R Lanza; John H Leamon; Steven M Lefkowitz; Ming Lei; Jing Li; Kenton L Lohman; Hong Lu; Vinod B Makhijani; Keith E McDade; Michael P McKenna; Eugene W Myers; Elizabeth Nickerson; John R Nobile; Ramona Plant; Bernard P Puc; Michael T Ronan; George T Roth; Gary J Sarkis; Jan Fredrik Simons; John W Simpson; Maithreyan Srinivasan; Karrie R Tartaro; Alexander Tomasz; Kari A Vogt; Greg A Volkmer; Shally H Wang; Yong Wang; Michael P Weiner; Pengguang Yu; Richard F Begley; Jonathan M Rothberg
Journal:  Nature       Date:  2005-07-31       Impact factor: 49.962

5.  tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence.

Authors:  T M Lowe; S R Eddy
Journal:  Nucleic Acids Res       Date:  1997-03-01       Impact factor: 16.971

6.  Genome-wide sequencing data reveals virulence factors implicated in banana Xanthomonas wilt.

Authors:  David J Studholme; Eric Kemen; Daniel MacLean; Sebastian Schornack; Valente Aritua; Richard Thwaites; Murray Grant; Julian Smith; Jonathan D G Jones
Journal:  FEMS Microbiol Lett       Date:  2010-07-15       Impact factor: 2.742

7.  Ralstonia solanacearum strains from Martinique (French West Indies) exhibiting a new pathogenic potential.

Authors:  Emmanuel Wicker; Laurence Grassart; Régine Coranson-Beaudu; Danièle Mian; Caroline Guilbaud; Mark Fegan; Philippe Prior
Journal:  Appl Environ Microbiol       Date:  2007-08-24       Impact factor: 4.792

8.  Genomes of three tomato pathogens within the Ralstonia solanacearum species complex reveal significant evolutionary divergence.

Authors:  Benoît Remenant; Bénédicte Coupat-Goutaland; Alice Guidot; Gilles Cellier; Emmanuel Wicker; Caitilyn Allen; Mark Fegan; Olivier Pruvost; Mounira Elbaz; Alexandra Calteau; Gregory Salvignol; Damien Mornico; Sophie Mangenot; Valérie Barbe; Claudine Médigue; Philippe Prior
Journal:  BMC Genomics       Date:  2010-06-15       Impact factor: 3.969
  8 in total
  19 in total

1.  HpaP modulates type III effector secretion in Ralstonia solanacearum and harbours a substrate specificity switch domain essential for virulence.

Authors:  David Lohou; Marie Turner; Fabien Lonjon; Anne-Claire Cazalé; Nemo Peeters; Stéphane Genin; Fabienne Vailleau
Journal:  Mol Plant Pathol       Date:  2014-02-19       Impact factor: 5.663

2.  Identification of virulence factors and type III effectors of phylotype I, Indian Ralstonia solanacearum strains Rs-09-161 and Rs-10-244.

Authors:  Trupti Asolkar; Raman Ramesh
Journal:  J Genet       Date:  2018-03       Impact factor: 1.166

3.  Hydroxycinnamic Acid Degradation, a Broadly Conserved Trait, Protects Ralstonia solanacearum from Chemical Plant Defenses and Contributes to Root Colonization and Virulence.

Authors:  Tiffany M Lowe; Florent Ailloud; Caitilyn Allen
Journal:  Mol Plant Microbe Interact       Date:  2015-03       Impact factor: 4.171

4.  Genome sequence of the tobacco bacterial wilt pathogen Ralstonia solanacearum.

Authors:  Zefeng Li; Sanling Wu; Xuefei Bai; Yun Liu; Jianfei Lu; Yong Liu; Bingguang Xiao; Xiuping Lu; Longjiang Fan
Journal:  J Bacteriol       Date:  2011-11       Impact factor: 3.490

5.  Genome-wide identification of type III effectors and other virulence factors in Ralstonia pseudosolanacearum causing bacterial wilt in ginger (Zingiber officinale).

Authors:  Erinjery Jose Suraby; K Bharathan Sruthi; Ginny Antony
Journal:  Mol Genet Genomics       Date:  2022-07-26       Impact factor: 2.980

6.  Complete genome sequence of the sesame pathogen Ralstonia solanacearum strain SEPPX 05.

Authors:  Xinshen Li; Xiaomei Huang; Gongyou Chen; Lifang Zou; Lingen Wei; Juling Hua
Journal:  Genes Genomics       Date:  2018-02-08       Impact factor: 1.839

7.  Light modulates important physiological features of Ralstonia pseudosolanacearum during the colonization of tomato plants.

Authors:  Josefina Tano; María Belén Ripa; María Laura Tondo; Analía Carrau; Silvana Petrocelli; María Victoria Rodriguez; Virginia Ferreira; María Inés Siri; Laura Piskulic; Elena Graciela Orellano
Journal:  Sci Rep       Date:  2021-07-15       Impact factor: 4.379

8.  ContigScape: a Cytoscape plugin facilitating microbial genome gap closing.

Authors:  Biao Tang; Qi Wang; Minjun Yang; Feng Xie; Yongqiang Zhu; Ying Zhuo; Shengyue Wang; Hong Gao; Xiaoming Ding; Lixin Zhang; Guoping Zhao; Huajun Zheng
Journal:  BMC Genomics       Date:  2013-04-30       Impact factor: 3.969

9.  Ralstonia solanacearum requires PopS, an ancient AvrE-family effector, for virulence and To overcome salicylic acid-mediated defenses during tomato pathogenesis.

Authors:  Jonathan M Jacobs; Annett Milling; Raka M Mitra; Clifford S Hogan; Florent Ailloud; Philippe Prior; Caitilyn Allen
Journal:  MBio       Date:  2013-11-26       Impact factor: 7.867

10.  Whole-Genome Sequence of Ralstonia solanacearum P673, a Strain Capable of Infecting Tomato Plants at Low Temperatures.

Authors:  Ana M Bocsanczy; Jose C Huguet-Tapia; David J Norman
Journal:  Genome Announc       Date:  2014-02-20
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