Literature DB >> 21677200

Whole-genome sequencing for optimized patient management.

Matthew N Bainbridge1, Wojciech Wiszniewski, David R Murdock, Jennifer Friedman, Claudia Gonzaga-Jauregui, Irene Newsham, Jeffrey G Reid, John K Fink, Margaret B Morgan, Marie-Claude Gingras, Donna M Muzny, Linh D Hoang, Shahed Yousaf, James R Lupski, Richard A Gibbs.   

Abstract

Whole-genome sequencing of patient DNA can facilitate diagnosis of a disease, but its potential for guiding treatment has been under-realized. We interrogated the complete genome sequences of a 14-year-old fraternal twin pair diagnosed with dopa (3,4-dihydroxyphenylalanine)-responsive dystonia (DRD; Mendelian Inheritance in Man #128230). DRD is a genetically heterogeneous and clinically complex movement disorder that is usually treated with l-dopa, a precursor of the neurotransmitter dopamine. Whole-genome sequencing identified compound heterozygous mutations in the SPR gene encoding sepiapterin reductase. Disruption of SPR causes a decrease in tetrahydrobiopterin, a cofactor required for the hydroxylase enzymes that synthesize the neurotransmitters dopamine and serotonin. Supplementation of l-dopa therapy with 5-hydroxytryptophan, a serotonin precursor, resulted in clinical improvements in both twins.

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Year:  2011        PMID: 21677200      PMCID: PMC3314311          DOI: 10.1126/scitranslmed.3002243

Source DB:  PubMed          Journal:  Sci Transl Med        ISSN: 1946-6234            Impact factor:   17.956


  30 in total

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Authors:  Brigitte Boeckmann; Amos Bairoch; Rolf Apweiler; Marie-Claude Blatter; Anne Estreicher; Elisabeth Gasteiger; Maria J Martin; Karine Michoud; Claire O'Donovan; Isabelle Phan; Sandrine Pilbout; Michel Schneider
Journal:  Nucleic Acids Res       Date:  2003-01-01       Impact factor: 16.971

2.  Mutations in the sepiapterin reductase gene cause a novel tetrahydrobiopterin-dependent monoamine-neurotransmitter deficiency without hyperphenylalaninemia.

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Journal:  Am J Hum Genet       Date:  2001-07-06       Impact factor: 11.025

3.  Dopa-responsive hypersomnia and mixed movement disorder due to sepiapterin reductase deficiency.

Authors:  Jennifer Friedman; Keith Hyland; Nenad Blau; Mia MacCollin
Journal:  Neurology       Date:  2006-12-12       Impact factor: 9.910

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Journal:  J Inherit Metab Dis       Date:  1996       Impact factor: 4.982

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Journal:  Neurology       Date:  1989-10       Impact factor: 9.910

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Journal:  Biol Chem       Date:  1999-12       Impact factor: 3.915

Review 7.  Classification and genetics of dystonia.

Authors:  Patricia M de Carvalho Aguiar; Laurie J Ozelius
Journal:  Lancet Neurol       Date:  2002-09       Impact factor: 44.182

8.  Clinical and genetic analysis of progressive dystonia with diurnal variation.

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Journal:  Arch Neurol       Date:  1991-09

9.  Dopa-responsive dystonia: long-term treatment response and prognosis.

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Journal:  Neurology       Date:  1991-02       Impact factor: 9.910

10.  The sequence of the human genome.

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Journal:  Science       Date:  2001-02-16       Impact factor: 47.728

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  132 in total

Review 1.  Genetic [corrected] insights into the causes and classification of [corrected] cerebral palsies.

Authors:  Andres Moreno-De-Luca; David H Ledbetter; Christa L Martin
Journal:  Lancet Neurol       Date:  2012-01-18       Impact factor: 44.182

2.  On the future of genetic risk assessment.

Authors:  Hans-Hilger Ropers
Journal:  J Community Genet       Date:  2012-04-01

3.  Sorting out sequencing data.

Authors:  Monya Baker
Journal:  Nat Methods       Date:  2011-09-29       Impact factor: 28.547

4.  Secrets of the human genome disclosed.

Authors:  Erika Check Hayden
Journal:  Nature       Date:  2011-10-04       Impact factor: 49.962

5.  Human genetics: Genomes on prescription.

Authors:  Brendan Maher
Journal:  Nature       Date:  2011-10-05       Impact factor: 49.962

6.  The DNA of a nation.

Authors:  Vivien Marx
Journal:  Nature       Date:  2015-08-27       Impact factor: 49.962

Review 7.  Next Generation Sequencing in the Clinic.

Authors:  Ratna Dua Puri
Journal:  Indian J Pediatr       Date:  2016-02-13       Impact factor: 1.967

8.  Rapid whole-genome sequencing for genetic disease diagnosis in neonatal intensive care units.

Authors:  Carol Jean Saunders; Neil Andrew Miller; Sarah Elizabeth Soden; Darrell Lee Dinwiddie; Aaron Noll; Noor Abu Alnadi; Nevene Andraws; Melanie LeAnn Patterson; Lisa Ann Krivohlavek; Joel Fellis; Sean Humphray; Peter Saffrey; Zoya Kingsbury; Jacqueline Claire Weir; Jason Betley; Russell James Grocock; Elliott Harrison Margulies; Emily Gwendolyn Farrow; Michael Artman; Nicole Pauline Safina; Joshua Erin Petrikin; Kevin Peter Hall; Stephen Francis Kingsmore
Journal:  Sci Transl Med       Date:  2012-10-03       Impact factor: 17.956

9.  Exploring the utility of whole-exome sequencing as a diagnostic tool in a child with atypical episodic muscle weakness.

Authors:  Neil A Hanchard; David R Murdock; Pilar L Magoulas; Matthew Bainbridge; Donna Muzny; YuanQing Wu; Min Wang; James R Lupski; Richard A Gibbs; Chester W Brown
Journal:  Clin Genet       Date:  2012-09-11       Impact factor: 4.438

10.  Personalized sequencing and the future of medicine: discovery, diagnosis and defeat of disease.

Authors:  Edward D Esplin; Ling Oei; Michael P Snyder
Journal:  Pharmacogenomics       Date:  2014-11       Impact factor: 2.533

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