Literature DB >> 21674372

Controlled confinement of DNA at the nanoscale: nanofabrication and surface bio-functionalization.

Matteo Palma1, Justin J Abramson, Alon A Gorodetsky, Colin Nuckolls, Michael P Sheetz, Shalom J Wind, James Hone.   

Abstract

Nanopatterned arrays of biomolecules are a powerful tool to address fundamental issues in many areas of biology. DNA nanoarrays, in particular, are of interest in the study of DNA-protein interactions and for biodiagnostic investigations. In this context, achieving a highly specific nanoscale assembly of oligonucleotides at surfaces is critical. In this chapter, we describe a method to control the immobilization of DNA on nanopatterned surfaces; the nanofabrication and the bio-functionalization involved in the process will be discussed.

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Year:  2011        PMID: 21674372      PMCID: PMC3381934          DOI: 10.1007/978-1-61779-142-0_12

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  20 in total

Review 1.  Soft lithography in biology and biochemistry.

Authors:  G M Whitesides; E Ostuni; S Takayama; X Jiang; D E Ingber
Journal:  Annu Rev Biomed Eng       Date:  2001       Impact factor: 9.590

2.  Kinetic analyses of divalent cation-dependent EcoRV digestions on a DNA-immobilized quartz crystal microbalance.

Authors:  Shuntaro Takahashi; Hisao Matsuno; Hiroyuki Furusawa; Yoshio Okahata
Journal:  Anal Biochem       Date:  2006-12-20       Impact factor: 3.365

3.  Self-assembled peptide nanoarrays: an approach to studying protein-protein interactions.

Authors:  Berea A R Williams; Kyle Lund; Yan Liu; Hao Yan; John C Chaput
Journal:  Angew Chem Int Ed Engl       Date:  2007       Impact factor: 15.336

4.  Switchable DNA interfaces for the highly sensitive detection of label-free DNA targets.

Authors:  Ulrich Rant; Kenji Arinaga; Simon Scherer; Erika Pringsheim; Shozo Fujita; Naoki Yokoyama; Marc Tornow; Gerhard Abstreiter
Journal:  Proc Natl Acad Sci U S A       Date:  2007-10-19       Impact factor: 11.205

Review 5.  DNA-templated nanofabrication.

Authors:  Héctor A Becerril; Adam T Woolley
Journal:  Chem Soc Rev       Date:  2008-11-26       Impact factor: 54.564

Review 6.  Selective covalent protein immobilization: strategies and applications.

Authors:  Lu Shin Wong; Farid Khan; Jason Micklefield
Journal:  Chem Rev       Date:  2009-09       Impact factor: 60.622

Review 7.  Nanobiotechnology and cell biology: micro- and nanofabricated surfaces to investigate receptor-mediated signaling.

Authors:  Alexis J Torres; Min Wu; David Holowka; Barbara Baird
Journal:  Annu Rev Biophys       Date:  2008       Impact factor: 12.981

8.  50 nm DNA nanoarrays generated from uniform oligonucleotide films.

Authors:  Hyunwoo Noh; Albert M Hung; Chulmin Choi; Ju Hun Lee; Jin-Yeol Kim; Sungho Jin; Jennifer N Cha
Journal:  ACS Nano       Date:  2009-08-25       Impact factor: 15.881

9.  Direct patterning of modified oligonucleotides on metals and insulators by dip-pen nanolithography.

Authors:  L M Demers; D S Ginger; S-J Park; Z Li; S-W Chung; C A Mirkin
Journal:  Science       Date:  2002-06-07       Impact factor: 47.728

10.  On the nature of DNA self-assembled monolayers on Au: measuring surface heterogeneity with electrochemical in situ fluorescence microscopy.

Authors:  Jeffrey N Murphy; Alan K H Cheng; Hua-Zhong Yu; Dan Bizzotto
Journal:  J Am Chem Soc       Date:  2009-03-25       Impact factor: 15.419

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  3 in total

1.  Improved Glass Surface Passivation for Single-Molecule Nanoarrays.

Authors:  Haogang Cai; Shalom J Wind
Journal:  Langmuir       Date:  2016-09-26       Impact factor: 3.882

2.  Robustly passivated, gold nanoaperture arrays for single-molecule fluorescence microscopy.

Authors:  Colin D Kinz-Thompson; Matteo Palma; Dileep K Pulukkunat; Daniel Chenet; James Hone; Shalom J Wind; Ruben L Gonzalez
Journal:  ACS Nano       Date:  2013-09-06       Impact factor: 15.881

3.  Reversible Photoisomerization in Thin Surface Films from Azo-Functionalized Guanosine Derivatives.

Authors:  Matjaž Ličen; Stefano Masiero; Silvia Pieraccini; Irena Drevenšek-Olenik
Journal:  ACS Omega       Date:  2021-06-07
  3 in total

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