Identification of early mechanisms that may lead from obesity towards complications such as metabolic syndrome is of great interest. Here we performed lipidomic analyses of adipose tissue in twin pairs discordant for obesity but still metabolically compensated. In parallel we studied more evolved states of obesity by investigating a separated set of individuals considered to be morbidly obese. Despite lower dietary polyunsaturated fatty acid intake, the obese twin individuals had increased proportions of palmitoleic and arachidonic acids in their adipose tissue, including increased levels of ethanolamine plasmalogens containing arachidonic acid. Information gathered from these experimental groups was used for molecular dynamics simulations of lipid bilayers combined with dependency network analysis of combined clinical, lipidomics, and gene expression data. The simulations suggested that the observed lipid remodeling maintains the biophysical properties of lipid membranes, at the price, however, of increasing their vulnerability to inflammation. Conversely, in morbidly obese subjects, the proportion of plasmalogens containing arachidonic acid in the adipose tissue was markedly decreased. We also show by in vitro Elovl6 knockdown that the lipid network regulating the observed remodeling may be amenable to genetic modulation. Together, our novel approach suggests a physiological mechanism by which adaptation of adipocyte membranes to adipose tissue expansion associates with positive energy balance, potentially leading to higher vulnerability to inflammation in acquired obesity. Further studies will be needed to determine the cause of this effect.
Identification of early mechanisms that may lead from obesity towards complications such as metabolic syndrome is of great interest. Here we performed lipidomic analyses of adipose tissue in twin pairs discordant for obesity but still metabolically compensated. In parallel we studied more evolved states of obesity by investigating a separated set of individuals considered to be morbidly obese. Despite lower dietary polyunsaturated fatty acid intake, the obese twin individuals had increased proportions of palmitoleic andarachidonic acids in their adipose tissue, including increased levels of ethanolamine plasmalogens containing arachidonic acid. Information gathered from these experimental groups was used for molecular dynamics simulations of lipid bilayers combined with dependency network analysis of combined clinical, lipidomics, and gene expression data. The simulations suggested that the observed lipid remodeling maintains the biophysical properties of lipid membranes, at the price, however, of increasing their vulnerability to inflammation. Conversely, in morbidly obese subjects, the proportion of plasmalogens containing arachidonic acid in the adipose tissue was markedly decreased. We also show by in vitro Elovl6 knockdown that the lipid network regulating the observed remodeling may be amenable to genetic modulation. Together, our novel approach suggests a physiological mechanism by which adaptation of adipocyte membranes to adipose tissue expansion associates with positive energy balance, potentially leading to higher vulnerability to inflammation in acquired obesity. Further studies will be needed to determine the cause of this effect.
Obesity is characterized by excess body fat, which is predominantly stored in the
adipose tissue. Obesity is considered one of the pathological features of metabolic
syndrome (MetS), which also includes insulin resistance, hypertension, and
dyslipidemia [1].
Although not all obese individuals develop metabolic and cardiovascular
complications, the clustering of these conditions of MetS suggests there may be
pathogenic mechanisms common to all these phenotypes [2],[3].The specific mechanisms that may lead from obesity towards the higher risk of
metabolic complications such as insulin resistance and type 2 diabetes (T2D) remain
elusive. Our preferred nonexclusive hypothesis is the “adipose tissue
expandability” hypothesis [2],[4], which states that obesity-associated metabolic
complications such as insulin resistance are due to the finite capacity of adipose
tissue to expand and therefore to store energy. In fact, once this limit of
expansion is reached and the storage capacity of adipose tissue is exceeded, the
lipids become deposited ectopically, leading to potentially toxic effects in
peripheral tissues via the excessive accumulation of reactive lipid species.In support of the pathogenic role of limited adipose tissue expandability and
functionality we have previously shown in a genetically obese leptin-deficientmouse
(ob/ob) model that ablation of adipogenic PPARγ2 (the POKO mouse) leads to a
65% decrease in adipose tissue mass as compared to ob/ob mouse, accumulation
of reactive lipids in pancreatic islets, liver, and muscle, and severe insulin
resistance and diabetes [5]. Interestingly, adipose tissue of the POKO mouse is also
characterized by an altered membrane phospholipid profile, characterized by
diminished levels of plasmalogens, the most abundant ether lipids [5]. The
opposite experimental paradigm, increasing the capacity of adipose tissue expansion
by overexpressing adiponectin in white adipose tissue of ob/ob mice (the AdTG-ob/ob
mouse), led to a considerably improved metabolic profile as compared to ob/ob mouse
[6]. Based on
this evidence we hypothesized that adaption to the demands posed by
positive-energy-balance-induced adipose tissue expansion may challenge the
homeostatic mechanisms controlling phospholipid composition and their associated
biophysical properties. However, given the importance of membrane lipid composition
and fluidity to maintain the topology, mobility, or activity of membrane-bound
proteins, and to ensure normal cellular physiology, we also speculated that the
process of adipose tissue expansion should also incorporate allostatic adaptations
aiming to maintain membrane functionality for as long as possible [7], particularly
under metabolically challenging conditions. In this respect we speculated that
exhaustion of these allostatic adaptations may determine the maximal limit of
expansion and may coincide with metabolic perturbations.Investigations of adipose tissue “lipidome,” covering a global profile of
structurally and functionally diverse lipids, provide a unique opportunity to pursue
accurately and sensitively studies profiling hundreds of molecular lipids in
parallel [8]. The
spatial complexity of lipid metabolism presents a challenge for the study of the
global lipidomic profiles. Studies of lipidomic profiles in the context of
biochemical pathways may shed light on processes behind the synthesis of or
regulation by specific lipids, but cannot address how these changes translate into
lipid membrane properties and affect cellular physiology. However, molecular
modeling tools and large scale computing capacities are becoming available that
facilitate modeling of lipid bilayers in the context of their composition and
function [9], thus
opening new opportunities to interpret regulation and changes of global lipidome
also in the spatial and physiological context.Given the recent increase in the prevalence of obesity and MetS, it is clear that on
top of their unquestionable polygenic component, other environmental factors such as
lack of physical activity or high caloric diets are likely contributors to their
progressive acceleration. However, individual heterogeneity in genetic and
environmental profiles makes the search for specific clues and mechanisms
facilitating adipose tissue expansion and its related metabolic complications in a
general population a daunting task. One suitable clinical study design setting to at
least homogenize and eliminate the genetic component of this challenge is the twin
design. Study of monozygotic (MZ) twin pairs, discordant for body weight, provides
an opportunity to explore the initial effects of acquired obesity and related
complications since these individuals share not only an identical genetic background
at the DNA sequence level, but also early life events and family environment.
Identification of mechanisms behind the traits related to acquired obesity and MetS
is also relevant from the therapeutic point of view, as these mechanisms may point
to targets for specific disease phenotypes that are not related to specific genetic
makeups.To obtain a global view of humanadipose tissue lipidome in different degrees of
acquired obesity, here we perform lipidomic analyses of adipose tissue in twin pairs
discordant for obesity but still metabolically compensated. In parallel, we studied
more evolved states of obesity by investigating a separate set of morbidly obese
subjects. Information gathered from these experimental groups was used for molecular
dynamics (MD) simulations of lipid bilayers using bioinformatics approaches, and the
conclusions were further supported by in vitro adipocyte confirmatory studies. This
approach uncovered the potential physiological mechanisms by which adipocyte
membranes adapt to adipose tissue expansion associated with positive energy balance,
ultimately leading to obesity. Furthermore, we demonstrate how in extreme obesity,
failure of this adaptation is associated with the pathological metabolic
manifestation of obesity.
Results
Twin Study Design
We first investigated acquired obesity independent of genetic influences in 13 MZ
twin pairs discordant for body mass index (BMI), and nine BMI-concordant MZ twin
pairs, of which five pairs were overweight (Table S1).
The obese individuals were young adults and were considered healthy obese, i.e.,
with no clinical comorbidities, and thus in the early stages of the development
of obesity. In this cohort, we have previously found that obese individuals, as
compared to their healthy lean twins, already show signs of insulin resistance
[10],
exhibit a pro-inflammatory serum lipidomic profile [11], have diminished
mitochondrial DNA copy number and dysregulated expression of mitochondrial
pathways such as branched chain amino acid catabolism, and have elevated
inflammatory and immune response pathways in the adipose tissue [12].Analysis of the weight-discordant twin pairs showed that the obese twins were on
average 15.2 kg (20%, 5.3 kg/m2) heavier than the non-obese
twins and had more fat subcutaneously, intra-abdominally, and in the liver
(Table
S1). Average adipocyte diameter was 17% larger in the obese
than in the non-obese twins, and, interestingly, there was also a very high
degree of intra-pair similarity of fat cell size (FCS) (Figure S1).
As expected, adiponectin levels were lower, and leptin and hsCRP levels higher,
in the obese twins. The obese twins were also more insulin resistant, as
evidenced by the lower M-value and higher fasting plasma glucose and serum
insulin levels. Among the dietary intake variables, the proportional intake of
polyunsaturated fatty acids (PUFAs) was 26% lower in heavy twins as
compared to their lean counterparts (p<0.05). The analysis
of weight-concordant twin pairs showed no intra-pair differences in FCS,
adipokines, or insulin sensitivity (Table S1).
Adipose Tissue Lipidome in Acquired Obesity
To characterize the adipose tissue lipidome in acquired obesity, we applied the
global lipidomics approach using ultra performance liquid chromatography coupled
to mass spectrometry (UPLC-MS). The analysis was performed in positive ion mode
(ESI+), which is sensitive to neutral lipids (such as triacylglycerols) and
major phospholipid classes such as phosphatidylcholines (PCs),
phosphatidylethanolamines (PEs), and sphingomyelins. A total of 313 lipids were
detected and quantified in each of the 44 samples analyzed. Additionally, free
cholesterol was determined by gas chromatography coupled to mass spectrometry
(GC-MS), and the data were included in the lipidomic dataset. Since we
considered that adipocyte size might be a factor affecting membrane and cell
lipid composition, we investigated the lipidome redistribution in relation to
the cell size. Thus, following the calibration with internal standards we
further normalized the data by the total amount of detected phospholipids in
each sample. This allowed us to investigate the relative compositional changes
of adipose tissue lipids.When comparing the weight-discordant twins, lipidomic analysis revealed
characteristic differences in cellular phospholipids (Figure 1A). The dominating characteristic of
adipose tissue in the obese twins was the elevation of PUFA-containing
phospholipids, which were predominantly ether lipids, and proportional
diminishment of phospholipids containing shorter and more saturated fatty acids.
These lipids were clustered according to BMI in both the discordant and
concordant twin pairs, suggesting that these observed changes are characteristic
of adipose tissue expansion per se, irrespective of genetic makeup. Figure 1B further illustrates
this by showing the normalized concentrations of the most abundant significantly
altered lipids. The most abundant PUFA-containing ether lipids were confirmed to
be plasmalogens (Figure S2). Partial least squares regression of lipidomic data
related to FCS showed that the changes in the top-ranking lipids associate with
the increase of adipocyte cell size in obesity (Figure S3).
In line with this, triacylglycerols were also elevated in the adipose tissue of
obese twins at the marginal significance level false discovery rate (FDR)
q<0.1 (Figure S4). Free cholesterol in adipose
tissue did not differ significantly between the obese and lean twins (Figure
S5).
Figure 1
Adipose tissue lipidome in acquired obesity.
Lipidomic analysis covered 314 molecular lipids in adipose tissue
biopsies from 44 subjects (13 twin pairs discordant for BMI, nine twin
pairs concordant for BMI). Thirty-four lipids were differentially
regulated when comparing obese and lean weight-discordant twins (FDR
q<0.05). (A) Lipidomic profiles of the 34
differentially regulated lipids in acquired obesity, shown for all
subjects included in the study. The detected ether phospholipids are
marked in green. The twin status for each subject is shown at the
bottom. (B) Concentration, shown as fraction of the total phospholipid
concentration as measured by lipidomics (Tot. PL), of the 11 most
abundant differentially regulated lipids from (A), shown separately
across the four groups corresponding to lean and heavy twins discordant
for BMI, and the concordant twin pairs divided into two groups: high BMI
(BMI≥25 kg/m2) and low BMI (BMI<25 kg/m2).
p-Values are shown for pairwise t
test comparison of discordant twins. *, p<0.05;
**, p<0.01; ***,
p<0.001. Error bars are ± SEM. SM,
sphingomyelin.
Adipose tissue lipidome in acquired obesity.
Lipidomic analysis covered 314 molecular lipids in adipose tissue
biopsies from 44 subjects (13 twin pairs discordant for BMI, nine twin
pairs concordant for BMI). Thirty-four lipids were differentially
regulated when comparing obese and lean weight-discordant twins (FDR
q<0.05). (A) Lipidomic profiles of the 34
differentially regulated lipids in acquired obesity, shown for all
subjects included in the study. The detected ether phospholipids are
marked in green. The twin status for each subject is shown at the
bottom. (B) Concentration, shown as fraction of the total phospholipid
concentration as measured by lipidomics (Tot. PL), of the 11 most
abundant differentially regulated lipids from (A), shown separately
across the four groups corresponding to lean and heavy twins discordant
for BMI, and the concordant twin pairs divided into two groups: high BMI
(BMI≥25 kg/m2) and low BMI (BMI<25 kg/m2).
p-Values are shown for pairwise t
test comparison of discordant twins. *, p<0.05;
**, p<0.01; ***,
p<0.001. Error bars are ± SEM. SM,
sphingomyelin.
Acquired Obesity Leads to Selectively Enhanced Fatty Acid Desaturation and
Elongation in Adipose Tissue
The observed changes in phospholipids in acquired obesity appear to be highly
selective, showing both functional group as well as fatty acid specificity. It
is known that PUFAs are selectively targeted to plasmalogens [13],[14], which
could explain enrichment of adipose tissue ether lipids in acquired obesity
(Figure 1). Notably,
among the elevated plasmalogens observed in the obese individuals, the fatty
acid dominantly esterified in the sn-2 position is arachidonic
acid and not docosahexanoic acid (DHA), which is also commonly found in
plasmalogens [13].To investigate whether specific global fatty acid compositional changes occur in
the adipose tissue in response to weight gain, we analyzed fatty acid profiles
in weight-discordant twin pairs. We found marked differences in several fatty
acids (Table
S2), which included diminishment of stearic (C18:0), linoleic
(C18∶2n6), and α-linolenic (C18∶3n3) acids and elevation of
palmitoleic (C16∶1n7) and arachidonic (C20∶4n6) acids (Figure 2A). In relation to
known dietary intake, the data are consistent with diminished PUFA intake
(decreased linoleic and α-linolenic acids), while other changes appear to
reflect an induced specific program of fatty acid desaturation and elongation
(Figure 2B), which leads
to elevated palmitoleic acid via desaturation of palmitic acid, and to elevated
long-chain PUFAs up to arachidonic acid, but not to DHA. The specific changes in
PUFA composition are consistent with the observed changes in phospholipids.
However, the elevation of esterified palmitoleic acid in the adipose tissue of
the obese twins was not reflected in significantly elevated free palmitoleate
levels in serum (Table S3 and Figure S6).
Figure 2
Fatty acid composition of adipose tissue in acquired obesity.
Fatty acid profile was measured in adipose tissue biopsies in each of the
44 subjects. Complete results are shown in Table
S2. (A) Selected fatty acid relative amounts in 13 twin pairs
discordant for BMI. Lines connect the pairs of twins. (B) Schematic
representation of fatty acid compositional changes when comparing heavy
and lean obesity-discordant twins. Significant changes
(p<0.05; pairwise t test) are
color-coded. The activities of specific fatty acid elongation or
desaturation steps are estimated by appropriate fatty acid concentration
ratios.
Fatty acid composition of adipose tissue in acquired obesity.
Fatty acid profile was measured in adipose tissue biopsies in each of the
44 subjects. Complete results are shown in Table
S2. (A) Selected fatty acid relative amounts in 13 twin pairs
discordant for BMI. Lines connect the pairs of twins. (B) Schematic
representation of fatty acid compositional changes when comparing heavy
and lean obesity-discordant twins. Significant changes
(p<0.05; pairwise t test) are
color-coded. The activities of specific fatty acid elongation or
desaturation steps are estimated by appropriate fatty acid concentration
ratios.
Elevated PUFA-Containing Phospholipids Help Maintain Membrane Fluidity and
Thickness
The observed remodeling of membrane phospholipids in expanding adipocytes of
obese twins suggests that these changes may also have an effect on membrane
properties such as membrane fluidity (packing), order, and thickness, which are
known to affect cellular physiology [15],[16]. There is evidence from
in vitro model systems and from atomic-scale MD simulations of lipid bilayers
that an increase in PUFA content will increase membrane fluidity [17]–[19]. The
lateral diffusion of lipids [20] and the permeability of the membrane to small
molecules [21]
are dependent on the fluidity through packing and degree of order in the
bilayer. However, the effect of the vinyl-ether bond in plasmalogens on membrane
fluidity is poorly understood and has not yet been modeled using MD
simulations.To study the consequences of altered lipidomic profiles on membrane biophysical
properties, we performed atomic-scale MD simulations of eight different membrane
systems. Based on measured abundance of differentially regulated lipids (Figure 1), the following lipid
types were used in simulations: PC(16∶1/18∶0),
PC(P-16∶1/18∶0), PC(16∶0/20∶4),
PC(P-16∶0/20∶4), PE(16∶0/20∶4), and
PE(P-16∶0/20∶4). Structures of PC(16∶0/20∶4) and
PC(P-16∶0/20∶4) are shown in Figure 3A. In addition to six one-component
bilayers composed of these lipids individually, we also studied two additional
mixtures of PC(16∶1/18∶0) and PE(P-16∶0/20∶4) with PE
concentration of 59 mole percent (low BMI mix) and 70 mole percent (high BMI
mix). The mixtures were designed to mimic the compositional difference between
the obese and non-obese twins (Figure 1B). The selection of the specific six lipid molecules was
motivated by the need to characterize specific effects due to three different
types of structural changes observed in the lipids: (1) functional group (PE
versus PC), (2) vinyl-ether versus ester bond in sn-1 position,
and (3) degree of saturation in the sn-2 chain. There is reason
to stress that considering all possible lipid combinations in membranes is not
feasible because of the major computational cost. Therefore, the above choice of
the eight model systems aims to clarify the overall effects on membrane fluidity
arising from the three different structural changes observed in lipids, but with
a reasonable cost. Yet the total simulation time is major, about 1 µs.
Figure 3
Large-scale molecular dynamics simulations of different lipid
membrane systems.
Six single-lipid component systems were studied, representing major
groups of lipids found to be differentially regulated in acquired
obesity (Figure 1A).
Two lipid mixes, corresponding to observed concentration changes of most
abundant lipids (Figure
1B), were also studied to represent lipid membrane
composition in heavy and lean weight-discordant twins. (A) Structures of
two PUFA-containing PCs included in the simulations, one plasmalogen and
one ester-bonded. (B) Average area per lipid of the eight simulated
bilayer systems, indicating the packing or fluidity of the bilayer
(smaller area means decreased fluidity). (C) The molecular order
parameter (S
mol) profiles along selected
unsaturated acyl chains. Segment number means the carbon position
starting from ester-vinyl linkage and ending at the methyl group in the
end of the chain. (D) Snapshots from the end of four simulations, with
the lipids ordered from top to bottom according to decreased fluidity
(area per lipid parameter from [B]).
Large-scale molecular dynamics simulations of different lipid
membrane systems.
Six single-lipid component systems were studied, representing major
groups of lipids found to be differentially regulated in acquired
obesity (Figure 1A).
Two lipid mixes, corresponding to observed concentration changes of most
abundant lipids (Figure
1B), were also studied to represent lipid membrane
composition in heavy and lean weight-discordant twins. (A) Structures of
two PUFA-containing PCs included in the simulations, one plasmalogen and
one ester-bonded. (B) Average area per lipid of the eight simulated
bilayer systems, indicating the packing or fluidity of the bilayer
(smaller area means decreased fluidity). (C) The molecular order
parameter (S
mol) profiles along selected
unsaturated acyl chains. Segment number means the carbon position
starting from ester-vinyl linkage and ending at the methyl group in the
end of the chain. (D) Snapshots from the end of four simulations, with
the lipids ordered from top to bottom according to decreased fluidity
(area per lipid parameter from [B]).Figure 3B displays the
average surface area per lipid, describing the overall packing of the lipids
within the membrane plane. The larger the area per lipid, the more fluid the
membrane is. Figure 3C shows
that when plasmalogens are replaced with the corresponding esterlipids, the
area per lipid increases by about 0.01–0.02 nm2. An increase of
0.07–0.09 nm2 is found when PE is replaced by PC headgroup.
Finally, increasing the unsaturation of PC acyl chains increases the average
surface area per lipid by 0.02–0.03 nm2. Together, membrane
fluidity is promoted by decreasing plasmalogen concentration, using PC instead
of PE headgroup, and increasing PUFA content. The snapshots in Figure 3D illustrate different
packings and thus different degrees of fluidity in four of the studied
bilayers.As expected, membrane thickness is negatively correlated with area for all
studied systems. Furthermore, increased lateral packing correlates with a higher
conformational order of the acyl chains. To illustrate this point, Figure 3C shows the inverse of
molecular order parameter (S
mol) averaged over the
saturated segments of the sn-1 acyl chains. It is clear that
the sn-1 chains of plasmalogens are more ordered than the
corresponding chains in the ester-bonded lipids.To our surprise, no marked differences in the surface area and thus fluidity are
observed when high and low BMI lipid mixtures are compared (Figure 3B). The data therefore suggest that
the increased fluidity due to elevated PUFA content in membrane phospholipids is
compensated for by decreased fluidity of the elevated PE plasmalogen lipids,
with the final result that there is no change in membrane fluidity and
thickness. The membrane clearly has compensatory mechanisms to maintain its
fluid nature.
Adipose Tissue Network
Next, we investigated the regulatory mechanisms that may be behind the observed
lipid remodeling. Because of the intrinsic complexity of lipid metabolism,
interactions of multiple components are likely involved in the regulation of
lipid changes [22]. To capture such functional interconnections between
the biological entities, we considered a network-based approach to be more
suitable than studies of differential expression changes at the individual gene
level. We selected ten clinical variables, 31 lipid-metabolism-related genes
from the published dataset [12] obtained from the same samples used in the present
study, two pathway profiles reflecting major changes observed in pathway
analysis [12], and ten lipid variables representative of major
changes observed in adipose tissue lipid profiles (Table S4).
As the only “input” variable, we used dietary PUFA intake (PUFA
percent). To distinguish direct and indirect interactions of these variables, we
utilized the QPGRAPH method, which has been previously applied to study gene
regulatory networks based on microarray data [23]. The key idea of QPGRAPH
is to use partial correlations as a measure of dependency and build an
undirected Gaussian graphical model where the variables are connected if and
only if their partial correlation is significantly non-zero. Unlike the pairwise
measure of associations, e.g., Pearson correlation coefficients, partial
correlation provides a stronger criterion for dependency by adjusting for
confounding effects, and thus removes spurious associations to a large extent.
This is particularly favorable for such an integration of multiple layers of
information, as it inherently filters out false positives by discovering only
those direct interactions with high confidence.The data-driven dependency network in twins discordant for obesity is shown in
Figure 4. Notably, PUFA
percent was connected to CD36, an important fatty acid transporter [24], which was
further connected to fatty acid elongase Elovl6. In such a network context,
identification of genes connected to many other genes or variables of interest,
i.e., so-called network hubs, is of particular interest. For example, despite
not being differentially regulated itself, Elovl6 appears to be an important
hub, with seven connections, including desaturase SCD1. Among the other
important regulators of lipogenesis, PPARγ was significantly down-regulated
in obese twins, and, along with fatty acid elongase Elovl4, which was not
differentially regulated, was associated with the decreased fatty acid ratio of
C22:5 versus C20:5, a step which appears to affect the balance between the
amounts of arachidonic acid and DHA (Figure 2). In agreement with earlier findings
[25], the
decreased expression of PPARγ was also associated with decreased expression
levels of insulin receptor substrate 2 (IRS2).
Figure 4
Regulation of lipid remodeling in adipose tissue.
A dependency network was constructed from selected gene expression,
clinical, and lipidomic data from twin pairs discordant for BMI. Node
shapes represent different types of variables and platforms (L, UPLC-MS
lipidomics; FA, fatty acid gas chromatography; GE, gene expression),
node color corresponds to significance and direction of regulation (full
data in Table S4), and line width is proportional to strength of
dependency. The variables are connected by an edge if and only if their
partial correlation is significantly non-zero. PUFA percent and the
nearest network hub (Elovl6) are highlighted with green squares. The
cutoff for the presence of edge was set at 0.55 by the average
non-rejection rate, i.e., an edge in the graph tested positive in
55% of the 500 samplings.
Regulation of lipid remodeling in adipose tissue.
A dependency network was constructed from selected gene expression,
clinical, and lipidomic data from twin pairs discordant for BMI. Node
shapes represent different types of variables and platforms (L, UPLC-MS
lipidomics; FA, fatty acid gas chromatography; GE, gene expression),
node color corresponds to significance and direction of regulation (full
data in Table S4), and line width is proportional to strength of
dependency. The variables are connected by an edge if and only if their
partial correlation is significantly non-zero. PUFA percent and the
nearest network hub (Elovl6) are highlighted with green squares. The
cutoff for the presence of edge was set at 0.55 by the average
non-rejection rate, i.e., an edge in the graph tested positive in
55% of the 500 samplings.
Elovl6 Regulates the Membrane Phospholipid Remodeling in Adipose
Tissue
We then investigated whether the observed network might be amenable to modulation
of the lipid profiles observed in the weight-discordant twins. Given its
position as a network hub (Figure
5) and its known regulatory role in the control of cellular fatty
acid composition [26], we hypothesized that ablation of Elovl6 might be an
upstream regulator of the lipid remodeling observed in obese twins, sensitive to
dietary stimulus such as relative decrease in PUFA intake. To gain further
insights we hypothesized that ablation of Elovl6 in the 3T3-L1 adipocyte cell
line might reveal a mirroring lipid pattern. In fact, lipidomic analysis of
preadipocytes and mature adipocytes revealed that ablation of Elovl6 leads to a
lipid profile opposite to the one observed in obese twins, thus supporting our
model (Figure 5 and Table S5).
Specifically, knock-down of Elovl6 leads to a reduction in PUFA-containing
phospholipids, which are predominantly ether-bonded, and to a proportional
elevation of shorter and more saturated phospholipid species.
Figure 5
Regulation of lipidomic profiles by Elovl6 in differentiated
adipocytes.
3T3-L1 preadipocytes were differentiated in wild-type (control) cell
line, and following 50% and 70% Elovl6 knockdown (KD)
(three biological replicates for each group). Lipidomic analysis was
performed in preadipocytes and in mature adipocytes. One-way ANOVA was
performed to test for the significance of time (mature adipocytes versus
preadipocytes) and group-specific lipid changes. Error bars are ±
SEM. Tot. PL, total phospholipids as measured by lipidomics. (A) The
upregulated phospholipids in Elovl6 knockdown cells are mainly shorter
chain and saturated. Selected lipids are shown. (B) The diminished
phospholipids are mainly PUFA containing, predominantly ether lipids.
Selected lipids are shown. All differentially regulated phospholipids in
Elovl6 knockdown cells are listed in Table
S5.
Regulation of lipidomic profiles by Elovl6 in differentiated
adipocytes.
3T3-L1 preadipocytes were differentiated in wild-type (control) cell
line, and following 50% and 70% Elovl6 knockdown (KD)
(three biological replicates for each group). Lipidomic analysis was
performed in preadipocytes and in mature adipocytes. One-way ANOVA was
performed to test for the significance of time (mature adipocytes versus
preadipocytes) and group-specific lipid changes. Error bars are ±
SEM. Tot. PL, total phospholipids as measured by lipidomics. (A) The
upregulated phospholipids in Elovl6 knockdown cells are mainly shorter
chain and saturated. Selected lipids are shown. (B) The diminished
phospholipids are mainly PUFA containing, predominantly ether lipids.
Selected lipids are shown. All differentially regulated phospholipids in
Elovl6 knockdown cells are listed in Table
S5.
Membrane Lipid Remodeling Breaks Down in Morbid Obesity
To investigate the lipid profile in pathogenic stages of obesity, we compared the
adipose tissue lipid compositional changes in obesity-discordant twin pairs
(Figure 1B) with
lipidomic profiles from our recent study of eight morbidly obese subjects
recruited among patients undergoing laparoscopic surgery for the treatment of
obesity [27]. The BMI range was 47.0–60.4 kg/m2; four
subjects had elevated fasting serum insulin (>10 mU/l), and among these two
subjects were diagnosed with T2D. The levels of shorter and more saturated
phospholipids were similar in the morbidly obese subjects and healthy twin pairs
(Figure 6A). However,
the proportion of PUFA-containing ether lipids was markedly lower (Figure 6B), indicating that
the mechanism of lipid remodeling observed in healthy obese subjects had broken
down or that it was unable to compensate at that level of stress. In contrast to
the obese twins, the linear dependence of fasting serum insulin on FCS appears
to have broken down in the morbidly obese subjects (Figure 6C and 6D). The major outliers were
the two subjects diagnosed with T2D, who had the smallest FCS and the highest
fasting serum insulin concentrations (Figure 6D).
Figure 6
Adipose tissue in morbid obesity is characterized by diminished
levels of PUFA-containing ether lipids.
Comparison of the amounts of abundant phospholipids differentially
regulated in acquired obesity in the subcutaneous adipose tissue (Figure 1B), shown as a
fraction of the total phospholipid concentration, with the mean amounts
in intra-abdominal (Ia fat) and subcutaneous (Sc fat) tissue biopsies of
eight morbidly obese subjects from an earlier study [27].
Tot. PL, total phospholipids as measured by lipidomics. (A) There are no
marked differences for abundant shorter-chain and saturated
phospholipids. *, p<0.05; **,
p<0.01. (B) The most abundant ether
phospholipids are markedly diminished in morbid obesity. (C) FCS and
fasting serum insulin (fS-Insulin) in morbidly obese subjects and twins
discordant for obesity. (D) FCS correlates with fasting serum insulin in
twins (all 44 subjects included in the study), but not in morbidly obese
subjects. The two subjects diagnosed with T2D are marked with filled
circles.
Adipose tissue in morbid obesity is characterized by diminished
levels of PUFA-containing ether lipids.
Comparison of the amounts of abundant phospholipids differentially
regulated in acquired obesity in the subcutaneous adipose tissue (Figure 1B), shown as a
fraction of the total phospholipid concentration, with the mean amounts
in intra-abdominal (Ia fat) and subcutaneous (Sc fat) tissue biopsies of
eight morbidly obese subjects from an earlier study [27].
Tot. PL, total phospholipids as measured by lipidomics. (A) There are no
marked differences for abundant shorter-chain and saturated
phospholipids. *, p<0.05; **,
p<0.01. (B) The most abundant etherphospholipids are markedly diminished in morbid obesity. (C) FCS and
fasting serum insulin (fS-Insulin) in morbidly obese subjects and twins
discordant for obesity. (D) FCS correlates with fasting serum insulin in
twins (all 44 subjects included in the study), but not in morbidly obese
subjects. The two subjects diagnosed with T2D are marked with filled
circles.
Discussion
Adipose tissue is a highly active endocrinometabolic organ whose main role is to
provide efficient storage and mobilization of lipids to fulfill bioenergetic
demands. Adipocyte function depends on the homeostasis of important cellular lipid
mediators and lipid structural components of biological membranes required for
accurate functional responses. These lipid functions are interconnected, e.g., the
membrane lipids also serve as precursors of lipid mediators. Modern lipidomics
technologies enable characterization of cellular lipidomes across multiple
structural and functional groups. However, the analysis and interpretation of data
from such datasets are commonly limited to the level of biochemical and signaling
pathways. In this study, we presented a new approach to study global lipidomes in
tissues and cells by combining cellular lipid networks with lipid membrane modeling.
This strategy enabled us to identify adaptive mechanisms that may lay behind the
characteristic remodeling of the adipose tissue lipidome in response to
positive-energy-balance-induced adipose tissue expansion during the evolution of
obesity.There is evidence suggesting that the total number of adipocytes in humans tends to
remain constant during a lifetime [28] under physiological conditions. Consequently the excess
lipid load in acquired obesity poses an extra layer of stress on the adipose tissue,
which can be compensated by increasing the size of the adipocytes and/or
overstimulating the normal processes of adipocyte turnover in the adipose tissue.
This relative stability of the adipose tissue cellular composition requires active
regulatory mechanisms. In agreement with this perspective, our data show that FCS is
increased in obese individuals relative to their lean twins in weight-discordant MZ
twin pairs (Figures 6C and S1). We also
observed a high degree of intra-pair similarity of FCS in weight-concordant MZ twin
pairs (Figure
S1), which suggests a strong genetic component tightly regulating FCS.
These changes in cell size may lead to and/or be affected by minor variations in
membrane composition, resulting in changes in membrane fluidity and lateral pressure
[9]. It would
be expected that these changes would consequently affect the membrane protein
function and thus cellular physiology. In this context we consider adipose tissue
expansion in response to positive energy balance to be a challenge for the
maintenance of membrane integrity and function, requiring potent adaptive allostatic
responses.With adipose cell expansion, more phospholipids have to be incorporated into the
cellular membranes. However, this process also requires a very accurate quality
control system that ensures that irrespective of the available lipid pool, the
composition of the membrane and its functionality is appropriate in expanding
adipocytes and newly recruited adipocytes. We found that the expansion of adipose
tissue is accompanied by a proportional increase of PUFA-containing ether lipids and
a decrease of more saturated and shorter-chain ester-bound lipids (Figure 1). These changes were also
reflected in the altered fatty acid composition (Figure 2). Given that no increase was observed in
saturated short-chain fatty acids (Figure 2), it is unlikely that de novo fatty acid synthesis could
explain the observed fatty acid profile. Of interest, proportional dietary intake of
PUFA was lower in obese twins than in their lean counterparts, and this was
reflected in the diminished linoleic and α-linolenic acids (Figure 2). However, paradoxically, the
concentration of arachidonic acid was increased in the obese twins, as was also
reflected in the altered profile of the phospholipids. Notably, this increase was
specific to arachidonic acid since there was no difference between the levels of DHA
of the obese and lean twins (Figure
2). The observed lipid changes are not systemic since we have previously
shown that the ether lipids are down-regulated in the serum of the obese twins [11].Our findings support the view that positive energy balance leading to obesity
initiates a program of membrane lipid remodeling in the adipose tissue, involving
increased biosynthesis of unsaturated fatty acids including arachidonic acid (Figure 7). In agreement with
earlier findings [29]–[31], arachidonic acid is actively incorporated into the
membrane phospholipids and selectively targeted to ethanolamine plasmalogens (Figure 1). However, if the only
membrane compositional changes were these specific changes in the fatty acid
composition, the membrane would become more fluid [19]. Instead, our membrane
simulations showed that the targeting of PUFAs to ether lipids, and preferentially
to the most abundant ethanolamine plasmalogen, helps to maintain membrane
biophysical properties. In fact, it is known that a relative increase in the PE/PC
ratio contributes to increasing the rigidity of the membrane [32] and therefore compensating for
increased fluidity mediated by unsaturated fatty acids. Here we also provided
evidence based on biophysical modeling that supports the view that the presence of a
vinyl-ether bond in the sn-1 position of phospholipids contributes
to further stiffening of the membrane.
Figure 7
Model of physiological regulation of lipid membrane composition in
obesity.
Model of physiological regulation of lipid membrane composition in
obesity.
MUFA, monounsaturated fatty acid; PL, phospholipid; SFA, saturated fatty
acid.The adaptation of adipose tissue membranes in obesity may carry a price. In fact,
plasmalogens can serve as antioxidants against reactive oxygen species and might
thus protect the cells from oxidative stress [33],[34]. However, when
arachidonic-acid-containing plasmalogens are under oxidative stress, they become
precursors of arachidonic-derived lipid mediators such as leukotrienes and
hydroxyeicosatetraenoic acids [29],[31],[35],[36]. These reactive lipids are important mediators of
inflammatory response [37]. Thus, this remodeling process occurring in the membranes
may make the adipocytes more vulnerable and prone to inflammatory responses (Figure 7), in agreement with the
elevation of inflammatory pathways in the obese twins of weight-discordant twin
pairs [12]. In
the context of inflammation, a crucial step in the observed lipid remodeling is the
relative decrease of C22:6 (DHA) and C22:5 as compared to C20:5, leading to a
relative increase of arachidonic acid content relative to DHA in acquired obesity
(Figure 2). In contrast to
arachidonic-acid-derived lipid mediators, the DHA-derived lipid mediators tend to
have anti-inflammatory properties [38]. We propose that stimulation of fatty acid elongation
from C20:5 to C22:5 and desaturation from C22:5 to C22:6 could be one strategy to
maintain the membrane function in acquired obesity, while also avoiding the
collateral damage of increasing the vulnerability of adipose tissue to
inflammation.We observed a high degree of linearity in FCS variation in weight-discordant twin
pairs (Figure
S1). This suggests that adipocytes of these relatively modestly obese
twins are still within the range of normal expansion and meeting the demands imposed
by their specific nutritional demands. However, this physiological process appears
to be disrupted in states of excessive adipose expansion beyond homeostatic capacity
in morbidly obese subjects, characterized by decreased concentrations of
ethanolamine plasmalogens compared to the “healthy obese” twins (Figure 6B). In morbidly obese
individuals, fasting serum insulin does not correlate with FCS (Figure 6D). The two diabetic subjects in this
group had, in fact, the smallest FCS, indicating that the limit of adipocyte
expandability may have been reached. Identification of pathways involved in
regulation of early adaptation to excess lipid load is important, since these
pathways might provide clues about prediction, prevention, or treatment of
obesity-related metabolic complications.We used the network approach, rather than a simpler gene expression level analysis,
to determine critical nodes that could control adipose tissue lipidome remodeling.
Doing so, we detected Elovl6, which, while not changed on an mRNA expression level
itself, appeared to be connected to multiple different factors involved in
controlling adipose tissue lipidome (Figure 4). To validate that perturbations in Elovl6 function were
capable of mediating at least some of the changes observed in the obese twins, we
used a cell line to validate our network. Consistent with our hypothesis, knockdown
of Elovl6 in 3T3-L1 adipocytes mirrored the results found in the obese twins,
therefore suggesting that the observed lipid remodeling may be amenable to genetic
modulation.As a potential limitation of the study, lipidomic analysis was performed in adipose
tissue biopsies and not in isolated adipocytes. It is known that obesity is
associated with the infiltration of inflammatory cells in the adipose tissue [39],[40]. We have in fact
observed elevation of multiple inflammatory and immune pathways in the obese twins
in our sample [12]. However, adipocytes and their lipids constitute most of
the adipose tissue pool per unit volume, and it is therefore unlikely that the
observed large change in phospholipid composition is due to changes in percent
cellular composition of the adipose tissue. Furthermore, if that were the case, the
lipidome changes observed in morbidly obese subjects (Figure 6) would have followed the same trend, but
to an even greater extent, as observed in the obese twins.One of the advantages of the twin study setting in the context of understanding humanobesity is the possibility to explore the initial effects of acquired obesity and
related complications independent of genetic makeup. The weight differences between
the twins in the discordant pairs began to emerge at 18 y of age [41], and diet
appears to be the major factor behind these differences [42]. The discordant pairs were of the
same age (mean ± standard deviation = 25.6±1.2
y) as the concordant pairs (25.7±1.2 y); therefore, age cannot be considered
a confounding factor in our study. The fact that it was extremely challenging to
find even this number of MZ twin pairs discordant for weight (only 14 pairs out of
the cohort of 2,453 twins born in Finland in the years 1975–1979, among which
adipose tissue was available from 13 pairs) and the fact that the obesity phenotypes
found were within a narrow range, suggest a strong genetic and early environmental
basis for susceptibility to obesity. Therefore, our study design offers considerable
advantages over other types of studies in humans where groups with different obesity
phenotypes also differ for their genotypes.In summary, we have used a novel approach to study cellular lipidomes, and our study
proposes an allostatic mechanism by which normal membrane function is maintained in
the expanding adipose tissue at the expense of increasing its vulnerability to
inflammation. The lipid remodeling seems to be triggered by the proportional
decrease of PUFA content and is controlled by a complex network involving fatty acid
desaturation and elongation. If small molecules could modulate this network for both
membrane functional maintenance and vulnerability to inflammation, new opportunities
may arise for the prevention or treatment of obesity-related metabolic
complications.
Materials and Methods
Subjects and Twin Study Design
Twin pairs included in the current study were recruited from a population-based
longitudinal study of five consecutive birth cohorts in Finland
(1975–1979) of twins (n = 2,453)
[43],
based on their responses to questions on weight and height at age 23–27 y.
From this cohort, we searched for the top 5% most obesity-discordant MZ
twin pairs (one twin non-obese [BMI ∼25 kg/m2] and the
other one obese [BMI ∼30 kg/m2]), with no significant
height differences (<3 cm). After screening all MZ twin pairs
(n = 658), we identified 18 pairs
above the 95th percentile of BMI differences (3.1 kg/m2)
[10],[41],[44]–[47]. Fourteen of these
pairs (eight male and six female pairs) were willing to participate, and
thirteen pairs (eight male and five female pairs; BMI differences 3.3–10.0
kg/m2) had adipose tissue samples available for the present
study. We also studied nine randomly selected weight-concordant MZ pairs (two
male and three female overweight pairs and two male and two female normal-weight
pairs, BMI differences 0.0–2.3 kg/m2). All pairs were
Caucasian, and the discordant pairs were of the same age (mean ± standard
deviation 25.6±1.2 y) as the concordant pairs (25.7±1.2 y). The
subjects were healthy (based on medical history, clinical examination, and
structured psychiatric interview), normotensive, and did not use any medications
except contraceptives. Their weight had been stable for at least 3 mo prior to
the study. Females were scheduled to attend during the follicular phase of their
menstrual cycle. Monozygosity was confirmed by the genotyping of ten informative
genetic markers [41]. Dietary information was collected based on 3-d food
diary as described previously [10]. Further details on
experimental methods are provided in Text S1.The subjects provided written informed consent. A small amount of subcutaneous
fat tissue aspirated by needle biopsy was used for the metabolic studies of
adipose tissue, as described in the consent form. The protocol was designed and
performed according to the principles of the Helsinki Declaration and was
approved by the Ethical Committee of the Helsinki University Central
Hospital.
Culture, Differentiation, and Infection of 3T3-L1 Preadipocytes
3T3-L1 cells were cultured, and differentiated into adipocytes using the
following protocol. 3T3-L1 preadipocytes were passaged in 25 mM glucoseDMEM
supplemented with 1% Pen-Strep (Sigma Aldrich P0781) and 1%
glutamine (Sigma Aldrich G7513). Differentiation cells were plated into six-well
culture dishes and allowed to grow to confluence. Two days post confluence
3T3-L1 preadipocytes were induced to become adipocytes. The induction medium was
25 mM DMEM with 10% fetal bovine serum (Sigma Aldrich), 1%
L-glutamine, and 1% Pen-Strep (FBS medium) supplemented with 100 nM
insulin, 1 µM dexamethasone, and 0.5 mM IBMX. At day 2 the medium was
replaced with FBS medium with insulin alone. From day 4 until day 8 cells were
grown in FBS medium alone until adipogenesis was complete. Differentiated cells
were used only when at least 95% of the cells showed an adipocyte
phenotype by accumulation of lipid droplets by day 8. Cells were analyzed by
phase contrast microscopy. Elovl6 knockdown cells (or controls) were generated
with the pSiren-RetroQ retroviral vector system. All retrovirally transfected
3T3-L1 cell lines were kept in puromycin-containing medium throughout culture
and differentiation procedures.
Retroviral Short Hairpin RNA Constructs for Elovl6
Stable knockdown of Elovl6 was achieved by expression of short hairpin RNA from
the pSiren-RetroQ vector (Clontech). Target sequences for knockdown of Elovl6
(GenBank Accession number NM_130450) were identified using the Dharmacon
siDesign center, and control cells were infected with virus for a scrambled
short hairpin RNA. Custom oligonucleotides (sequences available on request) were
designed to incorporate these sequences into short hairpin RNA expression
sequence, and cloned into pSiren-RetroQ according to the manufacturer's
instructions. The knockdown was confirmed at mRNA and enzyme activity levels
(Figure
S7) using the methods described in Text
S2.
Lipidomic Analysis of Adipose Tissue and 3T3-L1 Adipocytes
Global lipidomic profiles of adipose tissue biopsies were determined by using a
UPLC-MS platform [48]. Data processing was performed using the MZmine
software [49],[50]. Slightly different analytical methods were applied
for the tissue biopsies and 3T3-T1 adipocytes (Text S3).
Serum-free fatty acids as well as adipose tissue esterified fatty acids were
measured by gas chromatography. Free cholesterol in adipose tissue biopsies was
determined using GC-MS. Further details on lipidomic analysis are provided in
Text
S3.
Statistical Methods
Statistical analyses were performed using the freely available R statistical
software (http://www.r-project.org). FDR q-values [51] were
computed using statistical methods from R package “qvalue.”
Chemometric modeling using partial least squares [52] regression was performed
using Matlab version 7.0 (Mathworks) and PLS Toolbox version 4.0 of the Matlab
package (Eigenvector Research). The model-based clustering was performed using
the MCLUST method [53], implemented in R (Text S4).
Construction of the adipose tissue network for selected variables was performed
using undirected Gaussian graphical Markov networks that represent
q-order partial correlations between variables, implemented
in the R package “qpgraph” [23] that forms part of the
Bioconductor project (http://www.bioconductor.org). In these networks, missing edges
denote zero partial correlations between pairs of variables, and thus imply the
conditional independence relationships in the Gaussian case (Text S4).
The network was visualized using Cytoscape [54] and yED graphical editor
[55].
Lipid Bilayer Simulations
All simulated bilayer systems consisted of 128 lipid molecules and about 3,500
water molecules. The initial structures of all bilayers were obtained by
modification of a dipalmitoylphosphatidylcholine (DLPC) bilayer simulated for
130 ns as described in our previous study [56]. All the simulations were
performed using GROMACS software package version 4.0.4 [57] over a time scale of 100 ns.
The first 40 ns were considered an equilibration period, and the remaining
period of 60 ns of each trajectory was analyzed. Further detail on experimental
methods is provided in Text S4.Fat cell size in twins discordant and concordant for
obesity.(0.06 MB PDF)Click here for additional data file.ESI+ tandem mass spectrometry spectra of plasmalogens. The
plasmalogen identification using tandem mass spectrometry is based on
characteristic peaks acquired in positive ion mode.(0.03 MB PDF)Click here for additional data file.Fat cell size in acquired obesity correlates with changes in
phospholipid profile. Partial least squares regression of 34
differentially regulated lipids (Figure 1A) on FCS. Each lipid and FCS
variable X was twin-normalized using the formula
X
norm = log2(X
heavy/X
lean),
where X
heavy is the variable X
value for the heavy twin and X
lean is the
variable X value for the lean twin.(0.01 MB PDF)Click here for additional data file.Most abundant triacylglycerols in adipose tissue, sorted according to
abundance in the lean twins of weight-discordant pairs. When
comparing obesity-discordant twin pairs (heavy versus lean twin) using
pairwise t test, none of the shown triglycerides reached
FDR q<0.05, but they were all marginally significant at
FDR q<0.1. Error bars are ± standard error of the
mean (SEM). Tot. PL, total phospholipids as measured by lipidomics.(0.07 MB PDF)Click here for additional data file.Free cholesterol in adipose tissue. None of the comparisons are
statistically significant. Error bars are ± SEM.(0.02 MB PDF)Click here for additional data file.Serum palmitoleate correlation with adipose tissue esterified
palmitoleate. Twin normalization was performed as described in
Figure
S3.(0.03 MB PDF)Click here for additional data file.Elovl6 enzyme activity and mRNA expression in 3T3-L1 cell lines.
(A) Elovl6 3T3-L1 knockdown cell lines have a functional reduction in
C16:0–C18:0 fatty acid elongation ability. Elongation activity
expressed as incorporation of radioactive malonyl-CoA into lipid fraction in
picomoles per milligram of protein of isolated microsomes per minute.
Palmitoyl-CoA was used as the substrate for elongation in the reaction. (B)
Degree of knockdown of Elovl6 mRNA in 3T3-L1 cell lines. Expression in
arbitrary units normalized to 18s housekeeping gene. *,
p<0.05 versus control line, Student's
t test followed by Bonferroni correction for multiple
tests; n = 3 replicates per group.(0.04 MB PDF)Click here for additional data file.Physical and biochemical characteristics of weight-discordant
(
13)
and weight-concordant
(
9)
monozygotic twin pairs. Data are median (interquartile range).
aObese versus non-obese twins, paired Wilcoxon's test.
b
n = 9 discordant
pairs.(0.04 MB DOC)Click here for additional data file.Fatty acid composition in adipose tissue lipids of weight-discordant
(
13)
and weight-concordant
(
9)
monozygotic twin pairs. Data are median (interquartile range) (in
molar precentage). aObese versus non-obese twins, paired
t test.(0.04 MB DOC)Click here for additional data file.Serum-free fatty acid composition in adipose tissue lipids of
weight-discordant
(
13)
and weight-concordant
(
9)
monozygotic twin pairs. Data are median (interquartile range) (in
µmol/l). aObese versus non-obese twins, paired
t test.(0.04 MB DOC)Click here for additional data file.Selected variables included in the dependency network
analysis.(0.10 MB DOC)Click here for additional data file.Top-ranking phospholipids (PC and PE class) differentiating mature
adipocytes in Elovl6 70% knockdown cell line as compared to
controls.(0.04 MB DOC)Click here for additional data file.Experimental methods in the twin study.(0.04 MB DOC)Click here for additional data file.Characerization of Elovl6 knockdown in vitro.(0.04 MB DOC)Click here for additional data file.Methods for lipidomic analysis.(0.05 MB DOC)Click here for additional data file.Computational and statistical methods.(0.06 MB DOC)Click here for additional data file.
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Authors: James P Hardwick; Katie Eckman; Yoon Kwang Lee; Mohamed A Abdelmegeed; Andrew Esterle; William M Chilian; John Y Chiang; Byoung-Joon Song Journal: Adv Pharmacol Date: 2013
Authors: M Muniandy; S Heinonen; H Yki-Järvinen; A Hakkarainen; J Lundbom; N Lundbom; J Kaprio; A Rissanen; M Ollikainen; K H Pietiläinen Journal: Int J Obes (Lond) Date: 2017-04-25 Impact factor: 5.095
Authors: J Barr; J Caballería; I Martínez-Arranz; A Domínguez-Díez; C Alonso; J Muntané; M Pérez-Cormenzana; C García-Monzón; R Mayo; A Martín-Duce; M Romero-Gómez; O Lo Iacono; J Tordjman; R J Andrade; M Pérez-Carreras; Y Le Marchand-Brustel; A Tran; C Fernández-Escalante; E Arévalo; M García-Unzueta; K Clement; J Crespo; P Gual; M Gómez-Fleitas; M L Martínez-Chantar; A Castro; S C Lu; M Vázquez-Chantada; J M Mato Journal: J Proteome Res Date: 2012-03-15 Impact factor: 4.466
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