Literature DB >> 21659085

Family-level relationships of Onagraceae based on chloroplast rbcL and ndhF data.

Rachel A Levin1, Warren L Wagner, Peter C Hoch, Molly Nepokroeff, J Chris Pires, Elizabeth A Zimmer, Kenneth J Sytsma.   

Abstract

Despite intensive morphological and molecular studies of Onagraceae, relationships within the family are not fully understood. One drawback of previous analyses is limited sampling within the large tribe Onagreae. In addition, the monophyly of two species-rich genera in Onagreae, Camissonia and Oenothera, has never been adequately tested. To understand relationships within Onagraceae, test the monophyly of these two genera, and ascertain the affinities of the newly discovered genus Megacorax, we conducted parsimony and maximum likelihood analyses with rbcL and ndhF sequence data for 24 taxa representing all 17 Onagraceae genera and two outgroup Lythraceae. Results strongly support a monophyletic Onagraceae, with Ludwigia as the basal lineage and a sister-taxon relationship between Megacorax and Lopezia. Gongylocarpus is supported as sister to Epilobieae plus the rest of Onagreae, although relationships within the latter clade have limited resolution. Thus, we advocate placement of Gongylocarpus in a monogeneric tribe, Gongylocarpeae. Most relationships within Onagreae are weakly resolved, suggesting a rapid diversification of this group in western North America. Neither Camissonia nor Oenothera appears to be monophyletic; however, increased taxon sampling is needed to clarify those relationships. Morphological characters generally agree with the molecular data, providing further support for relationships.

Year:  2003        PMID: 21659085     DOI: 10.3732/ajb.90.1.107

Source DB:  PubMed          Journal:  Am J Bot        ISSN: 0002-9122            Impact factor:   3.844


  54 in total

1.  Vascular plant biodiversity of the lower Coppermine River valley and vicinity (Nunavut, Canada): an annotated checklist of an Arctic flora.

Authors:  Jeffery M Saarela; Paul C Sokoloff; Roger D Bull
Journal:  PeerJ       Date:  2017-01-31       Impact factor: 2.984

2.  Reconstruction of molecular phylogeny of closely related Amorphophallus species of India using plastid DNA marker and fingerprinting approaches.

Authors:  Avinash R Gholave; Kiran D Pawar; Shrirang R Yadav; Vishwas A Bapat; Jyoti P Jadhav
Journal:  Physiol Mol Biol Plants       Date:  2016-12-03

3.  A protocol for obtaining DNA barcodes from plant and insect fragments isolated from forensic-type soils.

Authors:  Kelly A Meiklejohn; Megan L Jackson; Libby A Stern; James M Robertson
Journal:  Int J Legal Med       Date:  2018-02-08       Impact factor: 2.686

4.  Non-destructive DNA extraction from herbarium specimens: a method particularly suitable for plants with small and fragile leaves.

Authors:  Norimasa Sugita; Atsushi Ebihara; Tsuyoshi Hosoya; Utsugi Jinbo; Shingo Kaneko; Takahide Kurosawa; Masanori Nakae; Tomohisa Yukawa
Journal:  J Plant Res       Date:  2019-11-23       Impact factor: 2.629

5.  Unravelling unexplored diversity of cercosporoid fungi (Mycosphaerellaceae, Mycosphaerellales, Ascomycota) in tropical Africa.

Authors:  Yalemwork Meswaet; Ralph Mangelsdorff; Nourou S Yorou; Meike Piepenbring
Journal:  MycoKeys       Date:  2021-06-17       Impact factor: 2.984

6.  DNA barcoding the Canadian Arctic flora: core plastid barcodes (rbcL + matK) for 490 vascular plant species.

Authors:  Jeffery M Saarela; Paul C Sokoloff; Lynn J Gillespie; Laurie L Consaul; Roger D Bull
Journal:  PLoS One       Date:  2013-10-22       Impact factor: 3.240

7.  Molecular identification of Saraca asoca from its substituents and adulterants.

Authors:  Satisha Hegde; Archana Saini; Harsha Vasudev Hegde; Sanjiva D Kholkute; Subarna Roy
Journal:  3 Biotech       Date:  2018-03-05       Impact factor: 2.406

8.  Phylogeographical Analyses of a Relict Fern of Palaeotropical Flora (Vandenboschia speciosa): Distribution and Diversity Model in Relation to the Geological and Climate Events of the Late Miocene and Early Pliocene.

Authors:  Samira Ben-Menni Schuler; Hammadi Hamza; Gabriel Blanca; Ana Teresa Romero-García; Víctor N Suárez-Santiago
Journal:  Plants (Basel)       Date:  2022-03-22

9.  Identification of the vascular plants of Churchill, Manitoba, using a DNA barcode library.

Authors:  Maria L Kuzmina; Karen L Johnson; Hannah R Barron; Paul Dn Hebert
Journal:  BMC Ecol       Date:  2012-11-28       Impact factor: 2.964

10.  The complete nucleotide sequences of the 5 genetically distinct plastid genomes of Oenothera, subsection Oenothera: II. A microevolutionary view using bioinformatics and formal genetic data.

Authors:  Stephan Greiner; Xi Wang; Reinhold G Herrmann; Uwe Rauwolf; Klaus Mayer; Georg Haberer; Jörg Meurer
Journal:  Mol Biol Evol       Date:  2008-07-08       Impact factor: 16.240

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